RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 IGKV2D-26A0A0A0MRZ7 120 aa16.28■□□□□ 0.2
COL18A1-207ENST00000473212 K7EP34 96 aa16.28■□□□□ 0.2
COL18A1-207ENST00000473212 ODF1Q14990 250 aa16.28■□□□□ 0.2
COL18A1-207ENST00000473212 RAXQ9Y2V3 346 aa16.28■□□□□ 0.2
COL18A1-207ENST00000473212 PRSS1P07477 247 aa16.28■□□□□ 0.2
COL18A1-207ENST00000473212 LINC01546A6NGU7 62 aa16.27■□□□□ 0.2
COL18A1-207ENST00000473212 CLEC3BP05452 202 aa16.27■□□□□ 0.2
COL18A1-207ENST00000473212 LINC01559Q495D7 138 aa16.27■□□□□ 0.2
COL18A1-207ENST00000473212 OR2K2Q8NGT1 345 aa16.27■□□□□ 0.2
COL18A1-207ENST00000473212 MEGF9Q9H1U4 602 aa16.27■□□□□ 0.2
COL18A1-207ENST00000473212 NXT2Q9NPJ8 142 aaKnown RBP16.27■□□□□ 0.2
COL18A1-207ENST00000473212 HHLA3Q9XRX5 114 aa16.27■□□□□ 0.2
COL18A1-207ENST00000473212 ATP6V0E1O15342 81 aa16.26■□□□□ 0.19
COL18A1-207ENST00000473212 DTX2Q86UW9 622 aa16.26■□□□□ 0.19
COL18A1-207ENST00000473212 EBI3Q14213 229 aa16.26■□□□□ 0.19
COL18A1-207ENST00000473212 SMIM15Q7Z3B0 74 aa16.26■□□□□ 0.19
COL18A1-207ENST00000473212 TMEM158Q8WZ71 300 aa16.26■□□□□ 0.19
COL18A1-207ENST00000473212 AJUBAQ96IF1 538 aa16.26■□□□□ 0.19
COL18A1-207ENST00000473212 IGKV3D-20A0A0C4DH25 116 aa16.25■□□□□ 0.19
COL18A1-207ENST00000473212 BUB3O43684 328 aa16.25■□□□□ 0.19
COL18A1-207ENST00000473212 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.25■□□□□ 0.19
COL18A1-207ENST00000473212 ZMAT4Q9H898 229 aa16.25■□□□□ 0.19
COL18A1-207ENST00000473212 ZFAND3Q9H8U3 227 aa16.25■□□□□ 0.19
COL18A1-207ENST00000473212 ZNF502Q8TBZ5 544 aa16.25■□□□□ 0.19
COL18A1-207ENST00000473212 FOXC2Q99958 501 aa16.25■□□□□ 0.19
COL18A1-207ENST00000473212 C11orf21Q9P2W6 132 aa16.25■□□□□ 0.19
COL18A1-207ENST00000473212 SIRPDQ9H106 197 aa16.24■□□□□ 0.19
COL18A1-207ENST00000473212 A0A1W2PPM0 123 aa16.24■□□□□ 0.19
COL18A1-207ENST00000473212 TRGV3P03979 118 aa16.24■□□□□ 0.19
COL18A1-207ENST00000473212 S100A7P31151 101 aa16.24■□□□□ 0.19
COL18A1-207ENST00000473212 CLEC19AQ6UXS0 136 aa16.24■□□□□ 0.19
COL18A1-207ENST00000473212 IGKCP01834 107 aa16.23■□□□□ 0.19
COL18A1-207ENST00000473212 GCSHP23434 173 aa16.23■□□□□ 0.19
COL18A1-207ENST00000473212 PIFOQ8TCI5 191 aa16.23■□□□□ 0.19
COL18A1-207ENST00000473212 CLPSL1A2RUU4 121 aa16.23■□□□□ 0.19
COL18A1-207ENST00000473212 GTSCR1Q86UQ5 136 aa16.23■□□□□ 0.19
COL18A1-207ENST00000473212 CCDC140Q96MF4 163 aa16.23■□□□□ 0.19
COL18A1-207ENST00000473212 AGPAT4-IT1Q9H0P7 198 aa16.23■□□□□ 0.19
COL18A1-207ENST00000473212 LINC00527Q9UJ94 153 aa16.23■□□□□ 0.19
COL18A1-207ENST00000473212 SPCS1Q9Y6A9 102 aa16.23■□□□□ 0.19
COL18A1-207ENST00000473212 OOSP1A8MZH6 123 aa16.22■□□□□ 0.19
COL18A1-207ENST00000473212 MINOS1Q5TGZ0 78 aa16.22■□□□□ 0.19
COL18A1-207ENST00000473212 MINOS1-NBL1R4GNA1 71 aa16.22■□□□□ 0.19
COL18A1-207ENST00000473212 FXYD2P54710 66 aa16.22■□□□□ 0.19
COL18A1-207ENST00000473212 Q8N8P6 123 aa16.22■□□□□ 0.19
COL18A1-207ENST00000473212 FAM110DQ8TAY7 271 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-207ENST00000473212 RBAKDNA6NC62 111 aa16.21■□□□□ 0.19
COL18A1-207ENST00000473212 SAA4P35542 130 aa16.21■□□□□ 0.19
COL18A1-207ENST00000473212 IGLV2-18A0A075B6J9 118 aa16.21■□□□□ 0.19
COL18A1-207ENST00000473212 IGHV3OR16-10A0A075B7F0 116 aa16.21■□□□□ 0.19
COL18A1-207ENST00000473212 TRAV26-2A0A0B4J265 109 aa16.21■□□□□ 0.19
COL18A1-207ENST00000473212 C1orf122Q6ZSJ8 110 aa16.21■□□□□ 0.19
COL18A1-207ENST00000473212 CSTL1Q9H114 145 aa16.21■□□□□ 0.19
COL18A1-207ENST00000473212 ABCA2Q9BZC7 2435 aa16.21■□□□□ 0.18
COL18A1-207ENST00000473212 GOSR1O95249 250 aa16.2■□□□□ 0.18
COL18A1-207ENST00000473212 SMIM13P0DJ93 91 aa16.2■□□□□ 0.18
COL18A1-207ENST00000473212 CHAC1Q9BUX1 264 aa16.2■□□□□ 0.18
COL18A1-207ENST00000473212 TMEM8BA6NDV4 472 aa16.2■□□□□ 0.18
COL18A1-207ENST00000473212 RIPPLY3P57055 190 aa16.2■□□□□ 0.18
COL18A1-207ENST00000473212 ZC2HC1BQ5TFG8 222 aa16.2■□□□□ 0.18
COL18A1-207ENST00000473212 SLC50A1Q9BRV3 221 aa16.2■□□□□ 0.18
COL18A1-207ENST00000473212 ITPR1Q14643 2758 aa16.19■□□□□ 0.18
COL18A1-207ENST00000473212 SMIM17P0DL12 118 aa16.19■□□□□ 0.18
COL18A1-207ENST00000473212 RAB9AP51151 201 aa16.19■□□□□ 0.18
COL18A1-207ENST00000473212 TMEM219Q86XT9 240 aa16.19■□□□□ 0.18
COL18A1-207ENST00000473212 UFC1Q9Y3C8 167 aa16.19■□□□□ 0.18
COL18A1-207ENST00000473212 SPRY2O43597 315 aa16.19■□□□□ 0.18
COL18A1-207ENST00000473212 DPM2O94777 84 aa16.19■□□□□ 0.18
COL18A1-207ENST00000473212 SAMD5Q5TGI4 173 aa16.19■□□□□ 0.18
COL18A1-207ENST00000473212 TMEM160Q9NX00 188 aa16.19■□□□□ 0.18
COL18A1-207ENST00000473212 HIGD1BQ9P298 99 aa16.19■□□□□ 0.18
COL18A1-207ENST00000473212 SPG11Q96JI7 2443 aa16.18■□□□□ 0.18
COL18A1-207ENST00000473212 TRAV8-2A0A0B4J237 113 aa16.18■□□□□ 0.18
COL18A1-207ENST00000473212 K7ERJ3 54 aa16.18■□□□□ 0.18
COL18A1-207ENST00000473212 FABP2P12104 132 aa16.18■□□□□ 0.18
COL18A1-207ENST00000473212 UBTD1Q9HAC8 227 aa16.18■□□□□ 0.18
COL18A1-207ENST00000473212 CELSR2Q9HCU4 2923 aa16.18■□□□□ 0.18
COL18A1-207ENST00000473212 TRBV25-1A0A075B6N4 114 aa16.18■□□□□ 0.18
COL18A1-207ENST00000473212 ATP5LO75964 103 aa16.18■□□□□ 0.18
COL18A1-207ENST00000473212 TMEM78Q5T7P6 136 aa16.18■□□□□ 0.18
COL18A1-207ENST00000473212 TRAV40A0A0B4J280 105 aa16.17■□□□□ 0.18
COL18A1-207ENST00000473212 IGHV7-4-1A0A0J9YVY3 117 aa16.17■□□□□ 0.18
COL18A1-207ENST00000473212 OR5A1Q8NGJ0 315 aa16.17■□□□□ 0.18
COL18A1-207ENST00000473212 PSMG4Q5JS54 123 aa16.17■□□□□ 0.18
COL18A1-207ENST00000473212 NRACQ8N912 160 aa16.17■□□□□ 0.18
COL18A1-207ENST00000473212 MRPL35Q9NZE8 188 aaKnown RBP16.17■□□□□ 0.18
COL18A1-207ENST00000473212 G3V4G9 280 aa16.16■□□□□ 0.18
COL18A1-207ENST00000473212 KLRB1Q12918 225 aa16.16■□□□□ 0.18
COL18A1-207ENST00000473212 NEGR1Q7Z3B1 354 aa16.16■□□□□ 0.18
COL18A1-207ENST00000473212 BPESC1Q9GZL8 116 aa16.16■□□□□ 0.18
COL18A1-207ENST00000473212 SMPXQ9UHP9 88 aa16.16■□□□□ 0.18
COL18A1-207ENST00000473212 J3KRW8 73 aa16.16■□□□□ 0.18
COL18A1-207ENST00000473212 DEFB1P60022 68 aa16.16■□□□□ 0.18
COL18A1-207ENST00000473212 K7EMI3 77 aa16.15■□□□□ 0.18
COL18A1-207ENST00000473212 IGF1P05019 195 aa16.15■□□□□ 0.18
COL18A1-207ENST00000473212 LAGE3Q14657 143 aa16.15■□□□□ 0.18
COL18A1-207ENST00000473212 C8orf86Q6ZUL3 223 aa16.15■□□□□ 0.18
COL18A1-207ENST00000473212 MYOZ3Q8TDC0 251 aa16.15■□□□□ 0.18
COL18A1-207ENST00000473212 CRYBG3Q68DQ2 2970 aa16.14■□□□□ 0.17
COL18A1-207ENST00000473212 SPANXN1Q5VSR9 72 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms