RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 SYT8Q8NBV8 401 aa5.83□□□□□ -1.48
CCDC171-205ENST00000472806 URB1-AS1Q96HZ7 61 aa5.83□□□□□ -1.48
CCDC171-205ENST00000472806 MAP1LC3AQ9H492 121 aa5.83□□□□□ -1.48
CCDC171-205ENST00000472806 ST20Q9HBF5 79 aa5.83□□□□□ -1.48
CCDC171-205ENST00000472806 ZMAT5Q9UDW3 170 aaKnown RBP5.83□□□□□ -1.48
CCDC171-205ENST00000472806 LINC00527Q9UJ94 153 aa5.83□□□□□ -1.48
CCDC171-205ENST00000472806 BOD1L1Q8NFC6 3051 aa5.83□□□□□ -1.48
CCDC171-205ENST00000472806 TMEM213A2RRL7 107 aa5.82□□□□□ -1.48
CCDC171-205ENST00000472806 CSN3P07498 182 aa5.82□□□□□ -1.48
CCDC171-205ENST00000472806 IGLC3P0DOY3 106 aa5.82□□□□□ -1.48
CCDC171-205ENST00000472806 ZNF80P51504 273 aaPredicted RBP5.82□□□□□ -1.48
CCDC171-205ENST00000472806 HNRNPA3P51991 378 aaKnown RBP5.82□□□□□ -1.48
CCDC171-205ENST00000472806 BLCAPP62952 87 aa5.82□□□□□ -1.48
CCDC171-205ENST00000472806 DEFB112Q30KQ8 113 aa5.82□□□□□ -1.48
CCDC171-205ENST00000472806 MRPL51Q4U2R6 128 aaKnown RBP5.82□□□□□ -1.48
CCDC171-205ENST00000472806 IGFL4Q6B9Z1 124 aa5.82□□□□□ -1.48
CCDC171-205ENST00000472806 GPHB5Q86YW7 130 aa5.82□□□□□ -1.48
CCDC171-205ENST00000472806 AMN1Q8IY45 258 aa5.82□□□□□ -1.48
CCDC171-205ENST00000472806 ZNF843Q8N446 348 aa5.82□□□□□ -1.48
CCDC171-205ENST00000472806 MS4A6AQ9H2W1 248 aa5.82□□□□□ -1.48
CCDC171-205ENST00000472806 NXT2Q9NPJ8 142 aaKnown RBP5.82□□□□□ -1.48
CCDC171-205ENST00000472806 IGHV4-4A0A075B6R2 117 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 IGHV3OR16-13A0A075B7E8 117 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 IGHV3-49A0A0A0MS15 119 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 IGHV3-74A0A0B4J1X5 117 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 OR4C46A6NHA9 309 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 TCF21O43680 179 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 IGHV3-11P01762 117 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 HBDP02042 147 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 ELANEP08246 267 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 RPL11P62913 178 aaKnown RBP5.81□□□□□ -1.48
CCDC171-205ENST00000472806 DEFB113Q30KQ7 82 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 PRSS57Q6UWY2 283 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 Q6ZN92 141 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 Q71RC1 249 aaPredicted RBP5.81□□□□□ -1.48
CCDC171-205ENST00000472806 SPATA12Q7Z6I5 190 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 PMCHL2Q9BQD1 86 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 RHPN1-AS1Q9BWJ2 59 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 SMPXQ9UHP9 88 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 VPREB3Q9UKI3 123 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 ATMQ13315 3056 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 DMXL2Q8TDJ6 3036 aa5.81□□□□□ -1.48
CCDC171-205ENST00000472806 ATRXP46100 2492 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 A0A096LNT2 108 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 M0QZ24 198 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 SOCS3O14543 225 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 SMAD7O15105 426 aaKnown RBP5.8□□□□□ -1.48
CCDC171-205ENST00000472806 SNAI2O43623 268 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 PF4P02776 101 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 RNF224P0DH78 156 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 PSMB8P28062 276 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 NUTF2P61970 127 aaKnown RBP5.8□□□□□ -1.48
CCDC171-205ENST00000472806 TDRG1Q3Y452 100 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 SPANXN1Q5VSR9 72 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 UNQ9165/PRO28630Q6UXU0 137 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 Q6YL49 198 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 OR8A1Q8NGG7 326 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 SNHG12Q9BXW3 62 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 SIGLEC8Q9NYZ4 499 aa5.8□□□□□ -1.48
CCDC171-205ENST00000472806 MRPS16Q9Y3D3 137 aaKnown RBP5.8□□□□□ -1.48
CCDC171-205ENST00000472806 SPTBN1Q01082 2364 aaKnown RBP5.79□□□□□ -1.48
CCDC171-205ENST00000472806 IGKV3D-20A0A0C4DH25 116 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 LOC389332A0A1B0GUA5 103 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 A0A1B0GV90 55 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 LINC01546A6NGU7 62 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 PPP1R17O96001 155 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 FSHBP01225 129 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 TRBV12-3P01733 135 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 IGHV4-59P01825 116 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 IGHV4-31P0DP07 118 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 S100A4P26447 101 aaKnown RBP5.79□□□□□ -1.48
CCDC171-205ENST00000472806 IFI27P40305 119 aaPredicted RBP5.79□□□□□ -1.48
CCDC171-205ENST00000472806 LEPP41159 167 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 ASIPP42127 132 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 LGALS9BQ3B8N2 356 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 TM4SF20Q53R12 229 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 COL5A1-AS1Q5SY13 56 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 LINC01545Q5VT33 79 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 LGALS9CQ6DKI2 356 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 APRG1Q8IVJ8 170 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 DPF1Q92782 380 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 MRAP2Q96G30 205 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 ODF3Q96PU9 254 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 ZNF747Q9BV97 191 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 KLK15Q9H2R5 256 aa5.79□□□□□ -1.48
CCDC171-205ENST00000472806 WNK2Q9Y3S1 2297 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 NBASA2RRP1 2371 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 PRSS47A8MTI9 375 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 LGALS9O00182 355 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 PRB1P04280 392 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 LGALS1P09382 135 aaKnown RBP5.78□□□□□ -1.48
CCDC171-205ENST00000472806 SNRPD3P62318 126 aaKnown RBP5.78□□□□□ -1.48
CCDC171-205ENST00000472806 Q5PR19 223 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 ATOH7Q8N100 152 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 TMEM86BQ8N661 226 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 DEFB125Q8N687 156 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 NRGNQ92686 78 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 RNF185Q96GF1 192 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 FAM19A4Q96LR4 140 aa5.78□□□□□ -1.48
CCDC171-205ENST00000472806 UBE2E2Q96LR5 201 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms