RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 MEGF8Q7Z7M0 2845 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 DUXBA0A1W2PPF3 345 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 CCDC160A6NGH7 325 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 DEGS1O15121 323 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 C1QCP02747 245 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 RBP1P09455 135 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 COX6A1P12074 109 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 HRES1P13985 223 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 CRYGSP22914 178 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 PPIBP23284 216 aaKnown RBP1.5□□□□□ -2.17
XRN1-210ENST00000472697 RBM11P57052 281 aaKnown RBP1.5□□□□□ -2.17
XRN1-210ENST00000472697 LYRM7Q5U5X0 104 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 GLT8D1Q68CQ7 371 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 SMARCD3Q6STE5 483 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 OR4E2Q8NGC2 313 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 OR10P1Q8NGE3 313 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 CCL4L1Q8NHW4 92 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 SMCR5Q8TEV8 140 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 OR5P3Q8WZ94 311 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 CHST6Q9GZX3 395 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 AICDAQ9GZX7 198 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 POPDC3Q9HBV1 291 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 MRPL16Q9NX20 251 aaKnown RBP1.5□□□□□ -2.17
XRN1-210ENST00000472697 TP53TG3Q9ULZ0 132 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 NCKAP5O14513 1909 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 RYR2Q92736 4967 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 A0A1W2PNM2 257 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 NDUFC2O95298 119 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 CPSF4O95639 269 aaKnown RBP1.5□□□□□ -2.17
XRN1-210ENST00000472697 IGHV3-7P01780 117 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 IGLV7-43P04211 117 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 G6PCP35575 357 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 RPL27AP46776 148 aaKnown RBP1.5□□□□□ -2.17
XRN1-210ENST00000472697 GABRA4P48169 554 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 Q8N9L7 120 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 OR8D4Q8NGM9 314 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 BRK1Q8WUW1 75 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 PSMF1Q92530 271 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 PFDN5Q99471 154 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 CCDC32Q9BV29 185 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 KRTAP4-3Q9BYR4 195 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 C20orf27Q9GZN8 174 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 FAIMQ9NVQ4 179 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 FKBP11Q9NYL4 201 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 EPDR1Q9UM22 224 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 HSPB11Q9Y547 144 aa1.5□□□□□ -2.17
XRN1-210ENST00000472697 WDFY3Q8IZQ1 3526 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 SDHAF1A6NFY7 115 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 FABP5P3A8MUU1 101 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 J3QRK9 145 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 KPNA4O00629 521 aaPredicted RBP1.49□□□□□ -2.17
XRN1-210ENST00000472697 OR10J4P0C629 311 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 CMPK1P30085 196 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 PDZD9Q8IXQ8 264 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 Q8NDZ9 215 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 PATE1Q8WXA2 126 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 MRPL32Q9BYC8 188 aaKnown RBP1.49□□□□□ -2.17
XRN1-210ENST00000472697 TNFSF18Q9UNG2 199 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 HEY1Q9Y5J3 304 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 SPENQ96T58 3664 aaKnown RBP1.49□□□□□ -2.17
XRN1-210ENST00000472697 PRRC2CQ9Y520 2896 aaKnown RBP1.49□□□□□ -2.17
XRN1-210ENST00000472697 UBFD1O14562 309 aaKnown RBP1.49□□□□□ -2.17
XRN1-210ENST00000472697 PIN1P1O15428 100 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 SNRNP200O75643 2136 aaKnown RBP1.49□□□□□ -2.17
XRN1-210ENST00000472697 LY6EQ16553 131 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 CCDC58Q4VC31 144 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 ZNF561Q8N587 486 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 OR4D11Q8NGI4 311 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 OR5A1Q8NGJ0 315 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 PYURFQ96I23 114 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 VPS25Q9BRG1 176 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 MIEN1Q9BRT3 115 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 LPAR5Q9H1C0 372 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 KLK5Q9Y337 293 aaPredicted RBP1.49□□□□□ -2.17
XRN1-210ENST00000472697 USF3Q68DE3 2245 aa1.49□□□□□ -2.17
XRN1-210ENST00000472697 IGKV1D-42A0A075B6H8 117 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 IGLV3-9A0A075B6K5 115 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 J3QQQ9 107 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 IGHV3-53P01767 116 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 STATHP02808 62 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 HTR1AP08908 422 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 CASP1P29466 404 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 PEBP1P30086 187 aaKnown RBP1.48□□□□□ -2.17
XRN1-210ENST00000472697 CAV1Q03135 178 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 RTL8BQ17RB0 113 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 PYDC2Q56P42 97 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 FAM27BQ5VT28 67 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 DEFB106AQ8N104 65 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 LYG1Q8N1E2 194 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 LZICQ8WZA0 190 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 PLEKHB2Q96CS7 222 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 RMI2Q96E14 147 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 GPER1Q99527 375 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 RTL8AQ9BWD3 113 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 SMAD5-AS1Q9Y6J3 95 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 U3KQ87 197 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 CNTRLQ7Z7A1 2325 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 SCN3AQ9NY46 2000 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 CCDC88CQ9P219 2028 aa1.48□□□□□ -2.17
XRN1-210ENST00000472697 ARFGEF3Q5TH69 2177 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms