RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 IGKV2-40A0A087WW87 121 aaPredicted RBP6.86□□□□□ -1.31
PTPRE-207ENST00000471218 IGHV3-49A0A0A0MS15 119 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 TRAV8-1A0A0A6YYK1 113 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 IGHV3-74A0A0B4J1X5 117 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 OR4C46A6NHA9 309 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 A8MTW9 85 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 ADARB2-AS1A8MUL3 147 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 ZNF705GA8MUZ8 300 aaPredicted RBP6.86□□□□□ -1.31
PTPRE-207ENST00000471218 K7EIL1 84 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 DUSP14O95147 198 aaKnown RBP6.86□□□□□ -1.31
PTPRE-207ENST00000471218 IGKV2D-40P01614 121 aaPredicted RBP6.86□□□□□ -1.31
PTPRE-207ENST00000471218 SNRPCP09234 159 aaKnown RBP6.86□□□□□ -1.31
PTPRE-207ENST00000471218 INSL3P51460 131 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 SLURP1P55000 103 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 WDR73Q6P4I2 378 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 FOXI2Q6ZQN5 318 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 NUDT10Q8NFP7 164 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 DYNLRB2Q8TF09 96 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 DLX4Q92988 240 aaPredicted RBP6.86□□□□□ -1.31
PTPRE-207ENST00000471218 NUDT11Q96G61 164 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 NAT8BQ9UHF3 227 aa6.86□□□□□ -1.31
PTPRE-207ENST00000471218 A0A1W2PPQ1 181 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 FABP5P3A8MUU1 101 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 C1orf196B1AJZ1 125 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 C3orf84H3BNL1 204 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 S100A8P05109 93 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 TSPOP30536 169 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 RAB5BP61020 215 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 OR5I1Q13606 314 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 DEFB136Q30KP8 78 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 DEFB114Q30KQ6 69 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 ADAMTSL5Q6ZMM2 481 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 RBPMS2Q6ZRY4 209 aaKnown RBP6.85□□□□□ -1.31
PTPRE-207ENST00000471218 RNF182Q8N6D2 247 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.85□□□□□ -1.31
PTPRE-207ENST00000471218 ZC2HC1AQ96GY0 325 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 FAM19A4Q96LR4 140 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 VGLL1Q99990 258 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
PTPRE-207ENST00000471218 RNASE7Q9H1E1 156 aaKnown RBP6.85□□□□□ -1.31
PTPRE-207ENST00000471218 COL7A1Q02388 2944 aa6.84□□□□□ -1.31
PTPRE-207ENST00000471218 A0A1W2PRX2 142 aa6.84□□□□□ -1.31
PTPRE-207ENST00000471218 IZUMO1RA6ND01 250 aa6.84□□□□□ -1.31
PTPRE-207ENST00000471218 LINC01559Q495D7 138 aa6.84□□□□□ -1.31
PTPRE-207ENST00000471218 EBLN2Q6P2I7 272 aa6.84□□□□□ -1.31
PTPRE-207ENST00000471218 C18orf65Q6ZTR6 163 aa6.84□□□□□ -1.31
PTPRE-207ENST00000471218 GNB1LQ9BYB4 327 aa6.84□□□□□ -1.31
PTPRE-207ENST00000471218 URGCP-MRPS24S4R325 110 aa6.84□□□□□ -1.31
PTPRE-207ENST00000471218 TRAV21A0A0B4J279 112 aa6.83□□□□□ -1.32
PTPRE-207ENST00000471218 A0A0J9YX75 114 aa6.83□□□□□ -1.32
PTPRE-207ENST00000471218 ZNF705FA8MVS1 300 aaPredicted RBP6.83□□□□□ -1.32
PTPRE-207ENST00000471218 PRAC2D3DTV9 90 aa6.83□□□□□ -1.32
PTPRE-207ENST00000471218 SH2D1AO60880 128 aa6.83□□□□□ -1.32
PTPRE-207ENST00000471218 LEPP41159 167 aa6.83□□□□□ -1.32
PTPRE-207ENST00000471218 PRR27Q6MZM9 219 aa6.83□□□□□ -1.32
PTPRE-207ENST00000471218 NHLRC2Q8NBF2 726 aa6.83□□□□□ -1.32
PTPRE-207ENST00000471218 OR2D3Q8NGH3 330 aa6.83□□□□□ -1.32
PTPRE-207ENST00000471218 C20orf173Q96LM9 149 aa6.83□□□□□ -1.32
PTPRE-207ENST00000471218 NEU1Q99519 415 aa6.83□□□□□ -1.32
PTPRE-207ENST00000471218 U3KQK5 164 aa6.83□□□□□ -1.32
PTPRE-207ENST00000471218 TGIF2-C20orf24A0A0A6YYL0 155 aa6.82□□□□□ -1.32
PTPRE-207ENST00000471218 HIGD1CA8MV81 97 aa6.82□□□□□ -1.32
PTPRE-207ENST00000471218 KLLNB2CW77 178 aa6.82□□□□□ -1.32
PTPRE-207ENST00000471218 F2Z2F3 143 aa6.82□□□□□ -1.32
PTPRE-207ENST00000471218 IGLV1-51P01701 117 aa6.82□□□□□ -1.32
PTPRE-207ENST00000471218 HLA-DQA1P01909 254 aa6.82□□□□□ -1.32
PTPRE-207ENST00000471218 AMBPP02760 352 aa6.82□□□□□ -1.32
PTPRE-207ENST00000471218 MED14OSP0DP75 135 aa6.82□□□□□ -1.32
PTPRE-207ENST00000471218 HLA-DMBP28068 263 aa6.82□□□□□ -1.32
PTPRE-207ENST00000471218 RPS10P46783 165 aaKnown RBP6.82□□□□□ -1.32
PTPRE-207ENST00000471218 TMEM61Q8N0U2 210 aa6.82□□□□□ -1.32
PTPRE-207ENST00000471218 CNFNQ9BYD5 112 aa6.82□□□□□ -1.32
PTPRE-207ENST00000471218 A0A1B0GXF2 115 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 TMEM189A5PLL7 270 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 HLA-DRB4P13762 266 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 CTRLP40313 264 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 CRIP1P50238 77 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 PSMG4Q5JS54 123 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 ACTL10Q5JWF8 245 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 DNLZQ5SXM8 178 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 DMRTA1Q5VZB9 504 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 IGFL4Q6B9Z1 124 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 LINC00322Q6ZN03 302 aaPredicted RBP6.81□□□□□ -1.32
PTPRE-207ENST00000471218 ZFAND2AQ8N6M9 145 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 LINC00482Q8N8I6 264 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 GATD1Q8NB37 220 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 NUP35Q8NFH5 326 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 Q8TAT8 98 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 BORCS7Q96B45 105 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 C20orf144Q9BQM9 153 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 HLA-DRB4X5D2U9 266 aa6.81□□□□□ -1.32
PTPRE-207ENST00000471218 DNAH9Q9NYC9 4486 aa6.8□□□□□ -1.32
PTPRE-207ENST00000471218 A0A1B0GUT8 65 aa6.8□□□□□ -1.32
PTPRE-207ENST00000471218 PHOX2AO14813 284 aa6.8□□□□□ -1.32
PTPRE-207ENST00000471218 ZNF688P0C7X2 276 aa6.8□□□□□ -1.32
PTPRE-207ENST00000471218 KRTAP10-11P60412 298 aa6.8□□□□□ -1.32
PTPRE-207ENST00000471218 HBBP68871 147 aa6.8□□□□□ -1.32
PTPRE-207ENST00000471218 ERCC8Q13216 396 aa6.8□□□□□ -1.32
PTPRE-207ENST00000471218 RIGQ13278 110 aa6.8□□□□□ -1.32
PTPRE-207ENST00000471218 TDRG1Q3Y452 100 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms