RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 HLA-DRB4P13762 266 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 RRAS2P62070 204 aaPredicted RBP0.78□□□□□ -2.28
SSB-209ENST00000470621 MRPS36P82909 103 aaKnown RBP0.78□□□□□ -2.28
SSB-209ENST00000470621 CCSMST1Q4G0I0 132 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 RPL13AP3Q6NVV1 102 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 HAGHLQ6PII5 290 aaPredicted RBP0.78□□□□□ -2.28
SSB-209ENST00000470621 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.78□□□□□ -2.28
SSB-209ENST00000470621 LINC00471Q8N535 108 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 OR4B1Q8NGF8 309 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 OTOSQ8NHW6 89 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 PATE1Q8WXA2 126 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 MUCL1Q96DR8 90 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 AP1S3Q96PC3 154 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 MCEEQ96PE7 176 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 TP53RKQ96S44 253 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 TPRKBQ9Y3C4 175 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 HLA-DRB4X5D2U9 266 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 IBTKQ9P2D0 1353 aaPredicted RBP0.78□□□□□ -2.28
SSB-209ENST00000470621 MBD5Q9P267 1494 aa0.78□□□□□ -2.28
SSB-209ENST00000470621 ADGRB1O14514 1584 aa0.78□□□□□ -2.29
SSB-209ENST00000470621 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.78□□□□□ -2.29
SSB-209ENST00000470621 EML5Q05BV3 1969 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 HEATR1Q9H583 2144 aaKnown RBP0.77□□□□□ -2.29
SSB-209ENST00000470621 SPAARA0A1B0GVQ0 90 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 TPT1P13693 172 aaKnown RBP0.77□□□□□ -2.29
SSB-209ENST00000470621 BRS3P32247 399 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 NCS1P62166 190 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 MIR22HGQ0VDD5 57 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 SPCS2Q15005 226 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 NEDD8Q15843 81 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 SPRNQ5BIV9 151 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 CLLU1Q5K131 121 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 GLIPR1L1Q6UWM5 242 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 FOXI2Q6ZQN5 318 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 CTAGE3PQ8IX95 158 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 TMEM254Q8TBM7 123 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 C2orf88Q9BSF0 95 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 LINC00470Q9BZP3 86 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 CALML5Q9NZT1 146 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 DISP2A7MBM2 1401 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 FGD6Q6ZV73 1430 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 KIF13AQ9H1H9 1805 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 TNRC6BQ9UPQ9 1833 aaKnown RBP0.77□□□□□ -2.29
SSB-209ENST00000470621 TRPM7Q96QT4 1865 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 MYH6P13533 1939 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 HELZP42694 1942 aaKnown RBP0.77□□□□□ -2.29
SSB-209ENST00000470621 MCM3APO60318 1980 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 FREM3P0C091 2139 aa0.77□□□□□ -2.29
SSB-209ENST00000470621 UNC13CQ8NB66 2214 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 ALPK3Q96L96 1907 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 KIDINS220Q9ULH0 1771 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 ERCC6Q03468 1493 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 CECR2Q9BXF3 1484 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 KDM6AO15550 1401 aaPredicted RBP0.76□□□□□ -2.29
SSB-209ENST00000470621 MYOM3Q5VTT5 1437 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 ROCK2O75116 1388 aaKnown RBP0.76□□□□□ -2.29
SSB-209ENST00000470621 TRAV14DV4A0A0A6YYC5 116 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.76□□□□□ -2.29
SSB-209ENST00000470621 ZNF736B4DX44 427 aaPredicted RBP0.76□□□□□ -2.29
SSB-209ENST00000470621 GEMIN2O14893 280 aaKnown RBP0.76□□□□□ -2.29
SSB-209ENST00000470621 CCL16O15467 120 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 ERC2-IT1O76042 136 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 SAA1P0DJI8 122 aaPredicted RBP0.76□□□□□ -2.29
SSB-209ENST00000470621 CXCL8P10145 99 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 OR5AS1Q8N127 324 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 LINC00052Q96N35 136 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 LIMD2Q9BT23 127 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 CST11Q9H112 138 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 SLC35B3Q9H1N7 401 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 METTL1Q9UBP6 276 aaKnown RBP0.76□□□□□ -2.29
SSB-209ENST00000470621 MYH13Q9UKX3 1938 aa0.76□□□□□ -2.29
SSB-209ENST00000470621 KIAA1549LQ6ZVL6 1849 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 CASZ1Q86V15 1759 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 CTTNBP2Q8WZ74 1663 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 GRIN2AQ12879 1464 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 LOC107984156A0A0G2JMH3 177 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 C3orf85A0A1B0GTC6 90 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 LOC107986453A0A1B0GWG9 222 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 K7ERU9 68 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 CDC42EP2O14613 210 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 LYRM1O43325 122 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 SULT1C4O75897 302 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 NCR2O95944 276 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 TRACP01848 142 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 PCBD1P61457 104 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 COPZ1P61923 177 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 ARL17AQ8IVW1 177 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 OR10AC1Q8NH08 325 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 OR5AK2Q8NH90 309 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 MPC1Q9Y5U8 109 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 SNURFQ9Y675 71 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 TNRC6AQ8NDV7 1962 aaKnown RBP0.75□□□□□ -2.29
SSB-209ENST00000470621 PTPRFP10586 1907 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 LRP5O75197 1615 aa0.75□□□□□ -2.29
SSB-209ENST00000470621 PHRF1Q9P1Y6 1649 aaKnown RBP0.75□□□□□ -2.29
SSB-209ENST00000470621 ADGRB2O60241 1585 aa0.74□□□□□ -2.29
SSB-209ENST00000470621 BCL9LQ86UU0 1499 aa0.74□□□□□ -2.29
SSB-209ENST00000470621 ATG2AQ2TAZ0 1938 aa0.74□□□□□ -2.29
SSB-209ENST00000470621 ANK1P16157 1881 aa0.74□□□□□ -2.29
SSB-209ENST00000470621 SIP14410 1827 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 240.4 ms