RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 F8W1H4 67 aa12.52□□□□□ -0.41
BRAT1-204ENST00000469750 MALRD1Q5VYJ5 2156 aa12.52□□□□□ -0.41
BRAT1-204ENST00000469750 H3BUA1 57 aa12.52□□□□□ -0.41
BRAT1-204ENST00000469750 C11orf53Q8IXP5 236 aa12.52□□□□□ -0.41
BRAT1-204ENST00000469750 Q8N8P6 123 aa12.52□□□□□ -0.41
BRAT1-204ENST00000469750 MED13LQ71F56 2210 aa12.51□□□□□ -0.41
BRAT1-204ENST00000469750 TRBV25-1A0A075B6N4 114 aa12.51□□□□□ -0.41
BRAT1-204ENST00000469750 RNF138Q8WVD3 245 aa12.51□□□□□ -0.41
BRAT1-204ENST00000469750 I3L3M4 83 aa12.51□□□□□ -0.41
BRAT1-204ENST00000469750 PCNX2A6NKB5 2137 aa12.51□□□□□ -0.41
BRAT1-204ENST00000469750 IGLC2P0DOY2 106 aa12.51□□□□□ -0.41
BRAT1-204ENST00000469750 IGLC3P0DOY3 106 aa12.51□□□□□ -0.41
BRAT1-204ENST00000469750 HOXB4P17483 251 aaPredicted RBP12.51□□□□□ -0.41
BRAT1-204ENST00000469750 TRAV12-2A0A075B6T6 113 aa12.51□□□□□ -0.41
BRAT1-204ENST00000469750 Q71RC1 249 aaPredicted RBP12.51□□□□□ -0.41
BRAT1-204ENST00000469750 TMEM141Q96I45 108 aa12.51□□□□□ -0.41
BRAT1-204ENST00000469750 WIPF3A6NGB9 483 aa12.5□□□□□ -0.41
BRAT1-204ENST00000469750 CHAC1Q9BUX1 264 aa12.5□□□□□ -0.41
BRAT1-204ENST00000469750 ZFHX2Q9C0A1 2572 aaPredicted RBP12.5□□□□□ -0.41
BRAT1-204ENST00000469750 PPDPFLQ8WWR9 84 aa12.5□□□□□ -0.41
BRAT1-204ENST00000469750 LAMTOR3Q9UHA4 124 aa12.5□□□□□ -0.41
BRAT1-204ENST00000469750 APOC4P55056 127 aa12.5□□□□□ -0.41
BRAT1-204ENST00000469750 FRMPD3Q5JV73 1810 aa12.5□□□□□ -0.41
BRAT1-204ENST00000469750 SDHAF1A6NFY7 115 aa12.49□□□□□ -0.41
BRAT1-204ENST00000469750 GAGE7O76087 117 aa12.49□□□□□ -0.41
BRAT1-204ENST00000469750 GAGE12FP0CL80 117 aa12.49□□□□□ -0.41
BRAT1-204ENST00000469750 GAGE12GP0CL81 117 aa12.49□□□□□ -0.41
BRAT1-204ENST00000469750 GAGE12IP0CL82 117 aa12.49□□□□□ -0.41
BRAT1-204ENST00000469750 V9GYV3 84 aa12.49□□□□□ -0.41
BRAT1-204ENST00000469750 OVOL2Q9BRP0 275 aa12.49□□□□□ -0.41
BRAT1-204ENST00000469750 KLF2Q9Y5W3 355 aaPredicted RBP12.49□□□□□ -0.41
BRAT1-204ENST00000469750 FXYD5Q96DB9 178 aa12.49□□□□□ -0.41
BRAT1-204ENST00000469750 DOCK9Q9BZ29 2069 aa12.49□□□□□ -0.41
BRAT1-204ENST00000469750 DEFB112Q30KQ8 113 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 MRPL51Q4U2R6 128 aaKnown RBP12.48□□□□□ -0.41
BRAT1-204ENST00000469750 ZNF491Q8N8L2 437 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 NUP210Q8TEM1 1887 aaPredicted RBP12.48□□□□□ -0.41
BRAT1-204ENST00000469750 ZGRF1Q86YA3 2104 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 STPG4Q8N801 248 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 VPREB3Q9UKI3 123 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 TTC28Q96AY4 2481 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 GAGE6Q13070 117 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 C10orf91Q5T1B1 145 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 PRR20EP86478 221 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 PRR20CP86479 221 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 PRR20DP86480 221 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 PRR20BP86481 221 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 PRR20AP86496 221 aa12.48□□□□□ -0.41
BRAT1-204ENST00000469750 C11orf52Q96A22 123 aa12.47□□□□□ -0.41
BRAT1-204ENST00000469750 IGLC7A0M8Q6 106 aa12.47□□□□□ -0.41
BRAT1-204ENST00000469750 PRSS57Q6UWY2 283 aa12.47□□□□□ -0.41
BRAT1-204ENST00000469750 SS18L2Q9UHA2 77 aa12.47□□□□□ -0.41
BRAT1-204ENST00000469750 PMVKQ15126 192 aa12.47□□□□□ -0.41
BRAT1-204ENST00000469750 NEGR1Q7Z3B1 354 aa12.47□□□□□ -0.41
BRAT1-204ENST00000469750 ZNRF2Q8NHG8 242 aa12.47□□□□□ -0.41
BRAT1-204ENST00000469750 INS-IGF2F8WCM5 200 aa12.47□□□□□ -0.41
BRAT1-204ENST00000469750 OR11H6Q8NGC7 330 aa12.47□□□□□ -0.41
BRAT1-204ENST00000469750 DKK4Q9UBT3 224 aa12.47□□□□□ -0.41
BRAT1-204ENST00000469750 F8WEM9 126 aa12.46□□□□□ -0.41
BRAT1-204ENST00000469750 IGHV4-59P01825 116 aa12.46□□□□□ -0.41
BRAT1-204ENST00000469750 ZC2HC1AQ96GY0 325 aa12.46□□□□□ -0.41
BRAT1-204ENST00000469750 SMIM27A0A1W2PRY6 76 aa12.46□□□□□ -0.41
BRAT1-204ENST00000469750 SHANK1Q9Y566 2161 aa12.46□□□□□ -0.41
BRAT1-204ENST00000469750 LHBP01229 141 aa12.46□□□□□ -0.41
BRAT1-204ENST00000469750 ZNF114Q8NC26 417 aa12.46□□□□□ -0.41
BRAT1-204ENST00000469750 C9JAW5 83 aa12.46□□□□□ -0.42
BRAT1-204ENST00000469750 TMEM243Q9BU79 118 aa12.46□□□□□ -0.42
BRAT1-204ENST00000469750 ZNF561-AS1K7EIQ3 104 aa12.45□□□□□ -0.42
BRAT1-204ENST00000469750 ZNF625Q96I27 306 aaPredicted RBP12.45□□□□□ -0.42
BRAT1-204ENST00000469750 FAM208BQ5VWN6 2430 aa12.45□□□□□ -0.42
BRAT1-204ENST00000469750 MUC6Q6W4X9 2439 aa12.45□□□□□ -0.42
BRAT1-204ENST00000469750 A0A1B0GUS0 222 aa12.45□□□□□ -0.42
BRAT1-204ENST00000469750 TRACP01848 142 aa12.45□□□□□ -0.42
BRAT1-204ENST00000469750 TRAV26-2A0A0B4J265 109 aa12.45□□□□□ -0.42
BRAT1-204ENST00000469750 SLAQ13239 276 aa12.45□□□□□ -0.42
BRAT1-204ENST00000469750 ETDBQ3ZM63 59 aa12.45□□□□□ -0.42
BRAT1-204ENST00000469750 PLXND1Q9Y4D7 1925 aa12.44□□□□□ -0.42
BRAT1-204ENST00000469750 CENPVL3A0A0U1RRI6 287 aa12.44□□□□□ -0.42
BRAT1-204ENST00000469750 IL15RAQ13261 267 aa12.44□□□□□ -0.42
BRAT1-204ENST00000469750 SPRNQ5BIV9 151 aa12.44□□□□□ -0.42
BRAT1-204ENST00000469750 GAGE2AQ6NT46 116 aa12.44□□□□□ -0.42
BRAT1-204ENST00000469750 FGF23Q9GZV9 251 aaPredicted RBP12.44□□□□□ -0.42
BRAT1-204ENST00000469750 BDP1A6H8Y1 2624 aa12.44□□□□□ -0.42
BRAT1-204ENST00000469750 TRBV20-1A0A075B6N2 111 aa12.44□□□□□ -0.42
BRAT1-204ENST00000469750 IGHV4-61A0A0C4DH41 118 aa12.44□□□□□ -0.42
BRAT1-204ENST00000469750 BOD1L2Q8IYS8 172 aa12.44□□□□□ -0.42
BRAT1-204ENST00000469750 TRAV8-3A0A0A6YYJ7 113 aa12.43□□□□□ -0.42
BRAT1-204ENST00000469750 KRTAP27-1Q3LI81 207 aa12.43□□□□□ -0.42
BRAT1-204ENST00000469750 IGHV3-38A0A0C4DH36 116 aa12.43□□□□□ -0.42
BRAT1-204ENST00000469750 H3BMM0 161 aa12.43□□□□□ -0.42
BRAT1-204ENST00000469750 UBE2WQ96B02 151 aa12.43□□□□□ -0.42
BRAT1-204ENST00000469750 DEFB113Q30KQ7 82 aa12.43□□□□□ -0.42
BRAT1-204ENST00000469750 FOXI2Q6ZQN5 318 aa12.43□□□□□ -0.42
BRAT1-204ENST00000469750 DNAJC30Q96LL9 226 aa12.42□□□□□ -0.42
BRAT1-204ENST00000469750 A0A1W2PPM0 123 aa12.42□□□□□ -0.42
BRAT1-204ENST00000469750 B5MCH6 92 aa12.42□□□□□ -0.42
BRAT1-204ENST00000469750 SRSF2Q01130 221 aaKnown RBP12.42□□□□□ -0.42
BRAT1-204ENST00000469750 SMIM2Q9BVW6 85 aa12.42□□□□□ -0.42
BRAT1-204ENST00000469750 HOXD3P31249 432 aaPredicted RBP12.42□□□□□ -0.42
BRAT1-204ENST00000469750 Q6ZWC4 215 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 324.6 ms