RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 TMEM8BA6NDV4 472 aa6.24□□□□□ -1.41
TPM3-215ENST00000469717 ZNF80P51504 273 aaPredicted RBP6.24□□□□□ -1.41
TPM3-215ENST00000469717 SUB1P53999 127 aaKnown RBP eCLIP6.24□□□□□ -1.414e-7■□□□□ 9
TPM3-215ENST00000469717 ZFHX3Q15911 3703 aa6.24□□□□□ -1.41
TPM3-215ENST00000469717 NPIPB5A8MRT5 1133 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 SH2D1AO60880 128 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 IGLV1-44P01699 117 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 HOXB4P17483 251 aaPredicted RBP6.23□□□□□ -1.41
TPM3-215ENST00000469717 C12orf74Q32Q52 190 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 SIGLEC15Q6ZMC9 328 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 PRO0461Q9UI25 63 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 NFE4Q86UQ8 179 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 TRGV9Q99603 122 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 MRPL35Q9NZE8 188 aaKnown RBP6.23□□□□□ -1.41
TPM3-215ENST00000469717 RNF7Q9UBF6 113 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 TRBV19A0A075B6N1 114 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 EGR2P11161 476 aaPredicted RBP6.23□□□□□ -1.41
TPM3-215ENST00000469717 HLA-DMBP28068 263 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 GAGE13Q4V321 117 aa6.23□□□□□ -1.41
TPM3-215ENST00000469717 KLF17Q5JT82 389 aaPredicted RBP6.23□□□□□ -1.41
TPM3-215ENST00000469717 WIPF1O43516 503 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 IGKV1-17P01599 117 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 CD3EP07766 207 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 TNFAIP6P98066 277 aaPredicted RBP6.22□□□□□ -1.41
TPM3-215ENST00000469717 TMEM200BQ69YZ2 307 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 ZNF493Q6ZR52 646 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 TMEM158Q8WZ71 300 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 CDIP1Q9H305 208 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 U3KQK5 164 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 COL12A1Q99715 3063 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 F8W1H4 67 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 IGHV1-46P01743 117 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 IGKCP01834 107 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 GNLYP22749 145 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 SMCPP49901 116 aaPredicted RBP6.22□□□□□ -1.41
TPM3-215ENST00000469717 TRAV26-2A0A0B4J265 109 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 NDUFA3O95167 84 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 APOMO95445 188 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 EFNA4P52798 201 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 XGP55808 180 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 ANXA2RQ3ZCQ2 193 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 LYPD2Q6UXB3 125 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 RNF183Q96D59 192 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 SPINK8P0C7L1 97 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 CT45A10P0DMU9 189 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 ZNF575Q86XF7 245 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 HIST1H4GQ99525 98 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 TM2D2Q9BX73 214 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 SPRY4Q9C004 299 aa6.22□□□□□ -1.41
TPM3-215ENST00000469717 CELSR1Q9NYQ6 3014 aa6.21□□□□□ -1.41
TPM3-215ENST00000469717 AKAP13Q12802 2813 aa6.21□□□□□ -1.41
TPM3-215ENST00000469717 RPL27AP46776 148 aaKnown RBP6.21□□□□□ -1.42
TPM3-215ENST00000469717 PLGLAQ15195 96 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 GATD1Q8NB37 220 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 ZNF418Q8TF45 676 aaPredicted RBP6.21□□□□□ -1.42
TPM3-215ENST00000469717 DEFB104AQ8WTQ1 72 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 RNF185Q96GF1 192 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 SLC25A15Q9Y619 301 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 IGHV3-35A0A0C4DH35 117 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 C8orf86Q6ZUL3 223 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 RASL11BQ9BPW5 248 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 FBXL15Q9H469 300 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 CYSLTR1Q9Y271 337 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 B5MCH6 92 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 K7ENP7 123 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 SPRY2O43597 315 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 IL4P05112 153 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 KLK15Q9H2R5 256 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 ERG28Q9UKR5 140 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 LINC00312Q9Y6C7 94 aa6.21□□□□□ -1.42
TPM3-215ENST00000469717 HES1Q14469 280 aa6.2□□□□□ -1.42
TPM3-215ENST00000469717 ZFP2Q6ZN57 461 aa6.2□□□□□ -1.42
TPM3-215ENST00000469717 ZMAT4Q9H898 229 aa6.2□□□□□ -1.42
TPM3-215ENST00000469717 COL27A1Q8IZC6 1860 aaPredicted RBP6.2□□□□□ -1.42
TPM3-215ENST00000469717 INS-IGF2F8WCM5 200 aa6.2□□□□□ -1.42
TPM3-215ENST00000469717 IGHV3-23P01764 117 aa6.2□□□□□ -1.42
TPM3-215ENST00000469717 MORN3Q6PF18 240 aaPredicted RBP6.2□□□□□ -1.42
TPM3-215ENST00000469717 HIGD1BQ9P298 99 aa6.2□□□□□ -1.42
TPM3-215ENST00000469717 TNFRSF6BO95407 300 aa6.2□□□□□ -1.42
TPM3-215ENST00000469717 RRN3P1Q2M238 152 aa6.2□□□□□ -1.42
TPM3-215ENST00000469717 VMA21Q3ZAQ7 101 aa6.2□□□□□ -1.42
TPM3-215ENST00000469717 Q6ZQT7 251 aa6.2□□□□□ -1.42
TPM3-215ENST00000469717 LYNX1G3V0Z9 82 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 ORM1P02763 201 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 TRGV3P03979 118 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 LYNX1P0DP58 116 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 MZT1Q08AG7 82 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 FOXI1Q12951 378 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 C1orf162Q8NEQ5 155 aaPredicted RBP6.19□□□□□ -1.42
TPM3-215ENST00000469717 KIR2DL4Q99706 377 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 MAP1LC3AQ9H492 121 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 TEX22C9J3V5 150 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 DPM2O94777 84 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 LINC00574Q9H8X3 128 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 RAB9BQ9NP90 201 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 ONECUT1Q9UBC0 465 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 DKK4Q9UBT3 224 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 FN1P02751 2386 aaKnown RBP6.19□□□□□ -1.42
TPM3-215ENST00000469717 LY6HO94772 140 aa6.19□□□□□ -1.42
TPM3-215ENST00000469717 MFAP4P55083 255 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms