RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 C2orf50Q96LR7 162 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 NPVFQ9HCQ7 196 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 FSIP2Q5CZC0 6907 aa7.01□□□□□ -1.29
NEDD9-207ENST00000468612 TRBV7-9A0A0J9YWB2 115 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 GOSR2O14653 212 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 PHOX2AO14813 284 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 ANXA3P12429 323 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 RRAS2P62070 204 aaPredicted RBP7□□□□□ -1.29
NEDD9-207ENST00000468612 ZNF266Q14584 549 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 C10orf113Q5VZT2 155 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 DPPA3Q6W0C5 159 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 RAB2BQ8WUD1 216 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 SH3BGRL3Q9H299 93 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 OR51M1Q9H341 326 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 KLK12Q9UKR0 248 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 KIF25-AS1Q9Y6Z4 181 aa7□□□□□ -1.29
NEDD9-207ENST00000468612 PIGBOS1A0A0B4J2F0 54 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 FAM25AB3EWG3 89 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 FAM25CB3EWG5 89 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 FAM25GB3EWG6 89 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 AGPAT2O15120 278 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 PRSS1P07477 247 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 SEC11BP0C7V7 166 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 LINC00694P0DN24 101 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 HIST1H1EP10412 219 aaKnown RBP6.99□□□□□ -1.29
NEDD9-207ENST00000468612 LSM3P62310 102 aaKnown RBP6.99□□□□□ -1.29
NEDD9-207ENST00000468612 SSBP1Q04837 148 aaKnown RBP6.99□□□□□ -1.29
NEDD9-207ENST00000468612 Q6AWC8 147 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 NIT1Q86X76 327 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 EXOC3-AS1Q8N2X6 119 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 UBE2WQ96B02 151 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 PRRT1Q99946 306 aa6.99□□□□□ -1.29
NEDD9-207ENST00000468612 A0A087WYN8 130 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 USP17L23D6RBM5 183 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 CIDEAO60543 219 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 ZNF138P52744 262 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 RAB31Q13636 194 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 PDE6HQ13956 83 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 NEDD8Q15843 81 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 CFAP126Q5VTH2 177 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 FAM159AQ6UWV7 190 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 IZUMO2Q6UXV1 221 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 Q8TAT8 98 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 RNF185Q96GF1 192 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 EXTL2Q9UBQ6 330 aa6.98□□□□□ -1.29
NEDD9-207ENST00000468612 A0A087WWC5 75 aa6.97□□□□□ -1.29
NEDD9-207ENST00000468612 GNRH2O43555 120 aa6.97□□□□□ -1.29
NEDD9-207ENST00000468612 PRR3P79522 188 aaKnown RBP6.97□□□□□ -1.29
NEDD9-207ENST00000468612 RPL19P84098 196 aaKnown RBP6.97□□□□□ -1.29
NEDD9-207ENST00000468612 REG3GQ6UW15 175 aa6.97□□□□□ -1.29
NEDD9-207ENST00000468612 OR10G9Q8NGN4 311 aa6.97□□□□□ -1.29
NEDD9-207ENST00000468612 SCGB3A2Q96PL1 93 aa6.97□□□□□ -1.29
NEDD9-207ENST00000468612 MGST2Q99735 147 aa6.97□□□□□ -1.29
NEDD9-207ENST00000468612 PSENENQ9NZ42 101 aa6.97□□□□□ -1.29
NEDD9-207ENST00000468612 CCDC59Q9P031 241 aaKnown RBP6.97□□□□□ -1.29
NEDD9-207ENST00000468612 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
NEDD9-207ENST00000468612 RABL2BQ9UNT1 228 aa6.97□□□□□ -1.29
NEDD9-207ENST00000468612 IGHV3-73A0A0B4J1V6 119 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 AKAIN1P0CW23 69 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 ID3Q02535 119 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 TMEM14EPQ6UXP3 125 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 CLVS1Q8IUQ0 354 aaPredicted RBP6.96□□□□□ -1.3
NEDD9-207ENST00000468612 CYB561D1Q8N8Q1 229 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 C7orf33Q8WU49 177 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 C15orf40Q8WUR7 153 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 SOSTQ9BQB4 213 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 C1orf43Q9BWL3 253 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 TMEM14CQ9P0S9 112 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 MGAT4CQ9UBM8 478 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 RAB26Q9ULW5 256 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 TIMM9Q9Y5J7 89 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 URGCP-MRPS24S4R325 110 aa6.96□□□□□ -1.3
NEDD9-207ENST00000468612 C5orf51A6NDU8 294 aa6.95□□□□□ -1.3
NEDD9-207ENST00000468612 METTL15P1P0C7V9 234 aa6.95□□□□□ -1.3
NEDD9-207ENST00000468612 MGST1P10620 155 aaKnown RBP6.95□□□□□ -1.3
NEDD9-207ENST00000468612 INPP1P49441 399 aa6.95□□□□□ -1.3
NEDD9-207ENST00000468612 Q0VG73 95 aa6.95□□□□□ -1.3
NEDD9-207ENST00000468612 SPACA4Q8TDM5 124 aa6.95□□□□□ -1.3
NEDD9-207ENST00000468612 CHCHD7Q9BUK0 85 aa6.95□□□□□ -1.3
NEDD9-207ENST00000468612 PLAC8Q9NZF1 115 aa6.95□□□□□ -1.3
NEDD9-207ENST00000468612 GAGE12JA6NER3 117 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 TYMSP04818 313 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 HOXB5P09067 269 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 GAGE1Q13065 139 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 GAGE4Q13068 117 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 GAGE5Q13069 117 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 ELOBQ15370 118 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 GAGE13Q4V321 117 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 MZT2AQ6P582 158 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 SPINK6Q6UWN8 80 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 OR1L4Q8NGR5 311 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 SMIM8Q96KF7 97 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 VCX3BQ9H321 246 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 AAMDCQ9H7C9 122 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 NAGKQ9UJ70 344 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 SCP2D1Q9UJQ7 156 aa6.94□□□□□ -1.3
NEDD9-207ENST00000468612 CHTF8P0CG12 524 aa6.93□□□□□ -1.3
NEDD9-207ENST00000468612 PYYP10082 97 aa6.93□□□□□ -1.3
NEDD9-207ENST00000468612 MRPS10P82664 201 aaKnown RBP6.93□□□□□ -1.3
NEDD9-207ENST00000468612 ARL16Q0P5N6 197 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms