RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 DPM2O94777 84 aa11.18□□□□□ -0.62
SEC16A-208ENST00000467838 ERCC8Q13216 396 aa11.18□□□□□ -0.62
SEC16A-208ENST00000467838 C11orf71Q6IPW1 123 aa11.18□□□□□ -0.62
SEC16A-208ENST00000467838 PHLDA1Q8WV24 401 aaPredicted RBP11.18□□□□□ -0.62
SEC16A-208ENST00000467838 CHAC1Q9BUX1 264 aa11.18□□□□□ -0.62
SEC16A-208ENST00000467838 PKD1L2Q7Z442 2459 aa11.18□□□□□ -0.62
SEC16A-208ENST00000467838 IGHV4-4A0A075B6R2 117 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 SMIM17P0DL12 118 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 FABP2P12104 132 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 TMEM11P17152 192 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 FXYD2P54710 66 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 SRSF1Q07955 248 aaKnown RBP eCLIP11.17□□□□□ -0.62
SEC16A-208ENST00000467838 Q8N9W7 124 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 TMEM158Q8WZ71 300 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 NAA38Q9BRA0 125 aaKnown RBP11.17□□□□□ -0.62
SEC16A-208ENST00000467838 TM2D2Q9BX73 214 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 CLPSL1A2RUU4 121 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 SMIM13P0DJ93 91 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 NRACQ8N912 160 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 HIF1ANQ9NWT6 349 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 C11orf21Q9P2W6 132 aa11.17□□□□□ -0.62
SEC16A-208ENST00000467838 IGHV7-4-1A0A0J9YVY3 117 aa11.16□□□□□ -0.62
SEC16A-208ENST00000467838 LY6HO94772 140 aa11.16□□□□□ -0.62
SEC16A-208ENST00000467838 GATA1P15976 413 aaPredicted RBP11.16□□□□□ -0.62
SEC16A-208ENST00000467838 GRNP28799 593 aaKnown RBP11.16□□□□□ -0.62
SEC16A-208ENST00000467838 RAB37Q96AX2 223 aa11.16□□□□□ -0.62
SEC16A-208ENST00000467838 ACACBO00763 2458 aa11.16□□□□□ -0.62
SEC16A-208ENST00000467838 TRBV25-1A0A075B6N4 114 aa11.16□□□□□ -0.62
SEC16A-208ENST00000467838 C15orf32Q32M92 178 aa11.16□□□□□ -0.62
SEC16A-208ENST00000467838 SAMD5Q5TGI4 173 aa11.16□□□□□ -0.62
SEC16A-208ENST00000467838 FOXC2Q99958 501 aa11.16□□□□□ -0.62
SEC16A-208ENST00000467838 TRAV8-2A0A0B4J237 113 aa11.15□□□□□ -0.62
SEC16A-208ENST00000467838 FAM90A27PA6NNH2 459 aa11.15□□□□□ -0.62
SEC16A-208ENST00000467838 PRSS1P07477 247 aa11.15□□□□□ -0.62
SEC16A-208ENST00000467838 RNF182Q8N6D2 247 aa11.15□□□□□ -0.62
SEC16A-208ENST00000467838 AGPAT4-IT1Q9H0P7 198 aa11.15□□□□□ -0.62
SEC16A-208ENST00000467838 COL6A6A6NMZ7 2263 aa11.15□□□□□ -0.62
SEC16A-208ENST00000467838 ITPR1Q14643 2758 aa11.15□□□□□ -0.63
SEC16A-208ENST00000467838 CCL21O00585 134 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 TRGV3P03979 118 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 GCSHP23434 173 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 TAL2Q16559 108 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 CCDC140Q96MF4 163 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 GOSR1O95249 250 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 ZC2HC1BQ5TFG8 222 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 C9orf47Q6ZRZ4 202 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 CEND1Q8N111 149 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 TTTY13Q9BZ97 58 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 U3KQE9 123 aa11.14□□□□□ -0.63
SEC16A-208ENST00000467838 IGHV3OR16-8A0A075B7F1 116 aa11.13□□□□□ -0.63
SEC16A-208ENST00000467838 LAGE3Q14657 143 aa11.13□□□□□ -0.63
SEC16A-208ENST00000467838 TM4SF20Q53R12 229 aa11.13□□□□□ -0.63
SEC16A-208ENST00000467838 AJUBAQ96IF1 538 aa11.13□□□□□ -0.63
SEC16A-208ENST00000467838 A0A087WX48 190 aa11.12□□□□□ -0.63
SEC16A-208ENST00000467838 LINC01619G3V211 115 aa11.12□□□□□ -0.63
SEC16A-208ENST00000467838 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
SEC16A-208ENST00000467838 GTSCR1Q86UQ5 136 aa11.12□□□□□ -0.63
SEC16A-208ENST00000467838 NBASA2RRP1 2371 aa11.12□□□□□ -0.63
SEC16A-208ENST00000467838 IGHV3-35A0A0C4DH35 117 aa11.12□□□□□ -0.63
SEC16A-208ENST00000467838 CLEC3BP05452 202 aa11.12□□□□□ -0.63
SEC16A-208ENST00000467838 TMEM78Q5T7P6 136 aa11.12□□□□□ -0.63
SEC16A-208ENST00000467838 MRPL35Q9NZE8 188 aaKnown RBP11.12□□□□□ -0.63
SEC16A-208ENST00000467838 ABCA4P78363 2273 aa11.11□□□□□ -0.63
SEC16A-208ENST00000467838 TRAV12-1A0A0B4J245 112 aa11.11□□□□□ -0.63
SEC16A-208ENST00000467838 E9PLD3 99 aa11.11□□□□□ -0.63
SEC16A-208ENST00000467838 ATP6V0E1O15342 81 aa11.11□□□□□ -0.63
SEC16A-208ENST00000467838 PLNP26678 52 aa11.11□□□□□ -0.63
SEC16A-208ENST00000467838 MRAP2Q96G30 205 aa11.11□□□□□ -0.63
SEC16A-208ENST00000467838 ATP6V0BQ99437 205 aa11.11□□□□□ -0.63
SEC16A-208ENST00000467838 TACC2O95359 2948 aa11.11□□□□□ -0.63
SEC16A-208ENST00000467838 ZFP36P26651 326 aaKnown RBP11.1□□□□□ -0.63
SEC16A-208ENST00000467838 ECSCRQ19T08 205 aa11.1□□□□□ -0.63
SEC16A-208ENST00000467838 C8orf86Q6ZUL3 223 aa11.1□□□□□ -0.63
SEC16A-208ENST00000467838 MYOZ3Q8TDC0 251 aa11.1□□□□□ -0.63
SEC16A-208ENST00000467838 LENEPQ9Y5L5 61 aa11.1□□□□□ -0.63
SEC16A-208ENST00000467838 RELNP78509 3460 aa11.1□□□□□ -0.63
SEC16A-208ENST00000467838 TRAV40A0A0B4J280 105 aa11.1□□□□□ -0.63
SEC16A-208ENST00000467838 K7ERJ3 54 aa11.1□□□□□ -0.63
SEC16A-208ENST00000467838 RIPPLY3P57055 190 aa11.1□□□□□ -0.63
SEC16A-208ENST00000467838 METTL26Q96S19 204 aa11.1□□□□□ -0.63
SEC16A-208ENST00000467838 TRBV7-1A0A0A6YYK4 115 aa11.09□□□□□ -0.63
SEC16A-208ENST00000467838 ADORA2A-AS1P86434 159 aa11.09□□□□□ -0.63
SEC16A-208ENST00000467838 EEF1AKMT3Q96AZ1 226 aa11.09□□□□□ -0.63
SEC16A-208ENST00000467838 SMIM2Q9BVW6 85 aa11.09□□□□□ -0.63
SEC16A-208ENST00000467838 SLC25A16P16260 332 aa11.08□□□□□ -0.64
SEC16A-208ENST00000467838 UBE2E1P51965 193 aa11.08□□□□□ -0.64
SEC16A-208ENST00000467838 DCHS2Q6V1P9 2916 aa11.08□□□□□ -0.64
SEC16A-208ENST00000467838 MAPKAPK5-AS1Q8N8E1 139 aa11.08□□□□□ -0.64
SEC16A-208ENST00000467838 TMEM160Q9NX00 188 aa11.08□□□□□ -0.64
SEC16A-208ENST00000467838 NHP2Q9NX24 153 aaKnown RBP11.08□□□□□ -0.64
SEC16A-208ENST00000467838 TRAV26-2A0A0B4J265 109 aa11.08□□□□□ -0.64
SEC16A-208ENST00000467838 A0A1B0GWB2 263 aa11.08□□□□□ -0.64
SEC16A-208ENST00000467838 CLEC19AQ6UXS0 136 aa11.08□□□□□ -0.64
SEC16A-208ENST00000467838 ITLN2Q8WWU7 325 aaPredicted RBP11.08□□□□□ -0.64
SEC16A-208ENST00000467838 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.64
SEC16A-208ENST00000467838 IGHV3-66A0A0C4DH42 116 aa11.07□□□□□ -0.64
SEC16A-208ENST00000467838 CENPVL3A0A0U1RRI6 287 aa11.07□□□□□ -0.64
SEC16A-208ENST00000467838 IGLL5B9A064 214 aa11.07□□□□□ -0.64
SEC16A-208ENST00000467838 F8VRH5 84 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms