RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 MCM3APO60318 1980 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 SDK1Q7Z5N4 2213 aa1.35□□□□□ -2.19
SMC4-208ENST00000467468 FGD6Q6ZV73 1430 aa1.34□□□□□ -2.19
SMC4-208ENST00000467468 SIP14410 1827 aa1.34□□□□□ -2.19
SMC4-208ENST00000467468 PNMA8CA0A1B0GUJ8 204 aa1.34□□□□□ -2.19
SMC4-208ENST00000467468 MPC1LP0DKB6 136 aa1.34□□□□□ -2.19
SMC4-208ENST00000467468 EVI2AP22794 236 aa1.34□□□□□ -2.19
SMC4-208ENST00000467468 PCBD1P61457 104 aa1.34□□□□□ -2.19
SMC4-208ENST00000467468 NEDD8Q15843 81 aa1.34□□□□□ -2.19
SMC4-208ENST00000467468 KRTAP4-1Q9BYQ7 146 aa1.34□□□□□ -2.19
SMC4-208ENST00000467468 DNAJC15Q9Y5T4 150 aa1.34□□□□□ -2.19
SMC4-208ENST00000467468 FREM3P0C091 2139 aa1.34□□□□□ -2.2
SMC4-208ENST00000467468 ARHGAP31Q2M1Z3 1444 aa1.33□□□□□ -2.2
SMC4-208ENST00000467468 ALPK3Q96L96 1907 aa1.33□□□□□ -2.2
SMC4-208ENST00000467468 SNRPD3P62318 126 aaKnown RBP1.33□□□□□ -2.2
SMC4-208ENST00000467468 C10orf111Q8N326 155 aa1.33□□□□□ -2.2
SMC4-208ENST00000467468 TCTEX1D1Q8N7M0 179 aa1.33□□□□□ -2.2
SMC4-208ENST00000467468 SMIM7Q9BQ49 75 aa1.33□□□□□ -2.2
SMC4-208ENST00000467468 WFDC10AQ9H1F0 79 aa1.33□□□□□ -2.2
SMC4-208ENST00000467468 COPZ2Q9P299 210 aa1.33□□□□□ -2.2
SMC4-208ENST00000467468 RP1L1Q8IWN7 2480 aaPredicted RBP1.33□□□□□ -2.2
SMC4-208ENST00000467468 PTPRFP10586 1907 aa1.32□□□□□ -2.2
SMC4-208ENST00000467468 OVOS2A0A0J9YW53 1432 aa1.32□□□□□ -2.2
SMC4-208ENST00000467468 OVOS2Q6IE36 1432 aa1.32□□□□□ -2.2
SMC4-208ENST00000467468 IGHV1-24A0A0C4DH33 117 aa1.32□□□□□ -2.2
SMC4-208ENST00000467468 A6NN06 94 aa1.32□□□□□ -2.2
SMC4-208ENST00000467468 BBIP1A8MTZ0 92 aa1.32□□□□□ -2.2
SMC4-208ENST00000467468 EDF1O60869 148 aaKnown RBP1.32□□□□□ -2.2
SMC4-208ENST00000467468 IGLV3-1P01715 115 aa1.32□□□□□ -2.2
SMC4-208ENST00000467468 CD3DP04234 171 aa1.32□□□□□ -2.2
SMC4-208ENST00000467468 HMGN1P05114 100 aa1.32□□□□□ -2.2
SMC4-208ENST00000467468 SPATA45Q537H7 98 aa1.32□□□□□ -2.2
SMC4-208ENST00000467468 C22orf24Q9Y442 160 aa1.32□□□□□ -2.2
SMC4-208ENST00000467468 TNRC6AQ8NDV7 1962 aaKnown RBP1.32□□□□□ -2.2
SMC4-208ENST00000467468 TANC2Q9HCD6 1990 aa1.31□□□□□ -2.2
SMC4-208ENST00000467468 WDR97A6NE52 1622 aa1.31□□□□□ -2.2
SMC4-208ENST00000467468 SULT1C4O75897 302 aa1.31□□□□□ -2.2
SMC4-208ENST00000467468 GLYATL3Q5SZD4 288 aa1.31□□□□□ -2.2
SMC4-208ENST00000467468 MMGT1Q8N4V1 131 aa1.31□□□□□ -2.2
SMC4-208ENST00000467468 LIMD2Q9BT23 127 aa1.31□□□□□ -2.2
SMC4-208ENST00000467468 LPAR5Q9H1C0 372 aa1.31□□□□□ -2.2
SMC4-208ENST00000467468 COMMD3Q9UBI1 195 aa1.31□□□□□ -2.2
SMC4-208ENST00000467468 DIDO1Q9BTC0 2240 aaKnown RBP1.31□□□□□ -2.2
SMC4-208ENST00000467468 FBN3Q75N90 2809 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 TRAV23DV6A0A075B6W5 121 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 A0A1W2PPB8 328 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 A0A1W2PRS3 328 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 KIR3DP1A8MWS1 328 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 IGHV3-30P01768 117 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 TSPAN19P0C672 248 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 IGLC6P0CF74 106 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 IGHV3-30-5P0DP03 117 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 PDE6GP18545 87 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 KDELR1P24390 212 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 KRTAP10-4P60372 401 aaPredicted RBP1.3□□□□□ -2.2
SMC4-208ENST00000467468 TCEAL4Q96EI5 215 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 AMELYQ99218 206 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 SMIM3Q9BZL3 60 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 SLC35B3Q9H1N7 401 aa1.3□□□□□ -2.2
SMC4-208ENST00000467468 CACNA1BQ00975 2339 aa1.29□□□□□ -2.2
SMC4-208ENST00000467468 M0R2Z0 102 aa1.29□□□□□ -2.2
SMC4-208ENST00000467468 COX4I1P13073 169 aa1.29□□□□□ -2.2
SMC4-208ENST00000467468 PLGLB1Q02325 96 aa1.29□□□□□ -2.2
SMC4-208ENST00000467468 C3orf62Q6ZUJ4 267 aa1.29□□□□□ -2.2
SMC4-208ENST00000467468 SBSPONQ8IVN8 264 aa1.29□□□□□ -2.2
SMC4-208ENST00000467468 OR8J3Q8NGG0 315 aa1.29□□□□□ -2.2
SMC4-208ENST00000467468 OR10AC1Q8NH08 325 aa1.29□□□□□ -2.2
SMC4-208ENST00000467468 HEATR1Q9H583 2144 aaKnown RBP1.29□□□□□ -2.2
SMC4-208ENST00000467468 CPDO75976 1380 aa1.29□□□□□ -2.2
SMC4-208ENST00000467468 DISP2A7MBM2 1401 aa1.29□□□□□ -2.2
SMC4-208ENST00000467468 ZFC3H1O60293 1989 aaKnown RBP1.28□□□□□ -2.2
SMC4-208ENST00000467468 POLEQ07864 2286 aa1.28□□□□□ -2.2
SMC4-208ENST00000467468 J3QR89 54 aa1.28□□□□□ -2.2
SMC4-208ENST00000467468 CDC42EP2O14613 210 aa1.28□□□□□ -2.2
SMC4-208ENST00000467468 SARNPP82979 210 aaKnown RBP1.28□□□□□ -2.2
SMC4-208ENST00000467468 OCIAD2Q56VL3 154 aa1.28□□□□□ -2.2
SMC4-208ENST00000467468 CSAG1Q6PB30 78 aa1.28□□□□□ -2.2
SMC4-208ENST00000467468 IDO2Q6ZQW0 420 aa1.28□□□□□ -2.2
SMC4-208ENST00000467468 PAIP2BQ9ULR5 123 aaKnown RBP1.28□□□□□ -2.2
SMC4-208ENST00000467468 BOKQ9UMX3 212 aaPredicted RBP1.28□□□□□ -2.2
SMC4-208ENST00000467468 KDM5CP41229 1560 aa1.28□□□□□ -2.2
SMC4-208ENST00000467468 PHRF1Q9P1Y6 1649 aaKnown RBP1.28□□□□□ -2.2
SMC4-208ENST00000467468 E9PCH4 1651 aa1.28□□□□□ -2.2
SMC4-208ENST00000467468 KIAA1549LQ6ZVL6 1849 aa1.28□□□□□ -2.2
SMC4-208ENST00000467468 PTPRGP23470 1445 aa1.27□□□□□ -2.21
SMC4-208ENST00000467468 NCR3O14931 201 aa1.27□□□□□ -2.21
SMC4-208ENST00000467468 YPEL1O60688 119 aa1.27□□□□□ -2.21
SMC4-208ENST00000467468 NCR2O95944 276 aa1.27□□□□□ -2.21
SMC4-208ENST00000467468 RBP4P02753 201 aa1.27□□□□□ -2.21
SMC4-208ENST00000467468 LINC00694P0DN24 101 aa1.27□□□□□ -2.21
SMC4-208ENST00000467468 ADCYAP1P18509 176 aa1.27□□□□□ -2.21
SMC4-208ENST00000467468 NCS1P62166 190 aa1.27□□□□□ -2.21
SMC4-208ENST00000467468 RHOHQ15669 191 aa1.27□□□□□ -2.21
SMC4-208ENST00000467468 PFDN5Q99471 154 aa1.27□□□□□ -2.21
SMC4-208ENST00000467468 CASP8AP2Q9UKL3 1982 aa1.27□□□□□ -2.21
SMC4-208ENST00000467468 PEAK1Q9H792 1746 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.26□□□□□ -2.21
SMC4-208ENST00000467468 SYNJ1O43426 1573 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 UHRF1BP1LA0JNW5 1464 aa1.26□□□□□ -2.21
SMC4-208ENST00000467468 SOGA1O94964 1423 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms