RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 C1orf100Q5SVJ3 147 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 Q6ZS52 159 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 SIGLECL1Q8N7X8 197 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 OR8B3Q8NGG8 313 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 C11orf52Q96A22 123 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 TVP23CQ96ET8 276 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 VSIG2Q96IQ7 327 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 RHNO1Q9BSD3 238 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 UPK3BQ9BT76 320 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 SLC25A22Q9H936 323 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 CCL26Q9Y258 94 aa4.15□□□□□ -1.75
LRCH3-212ENST00000466845 GVINP1Q7Z2Y8 2422 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 F5P12259 2224 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 OBSL1O75147 1896 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 WDFY4Q6ZS81 3184 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 IGHV3OR16-12A0A075B7B8 117 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 IGHV3-20A0A0C4DH32 117 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 IGLV2-11P01706 119 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 IGHV3-7P01780 117 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 SRP19P09132 144 aaKnown RBP4.14□□□□□ -1.75
LRCH3-212ENST00000466845 IGLL1P15814 213 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 AQP1P29972 269 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 SS18Q15532 418 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 KRTAP27-1Q3LI81 207 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 NFE4Q86UQ8 179 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 CEND1Q8N111 149 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 NKAPP1Q8N9T2 125 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 WFDC5Q8TCV5 224 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 ZNF492Q9P255 531 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 EPDR1Q9UM22 224 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 SCN8AQ9UQD0 1980 aa4.14□□□□□ -1.75
LRCH3-212ENST00000466845 MYO16Q9Y6X6 1858 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 ATOX1O00244 68 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 HLA-DPB1P04440 258 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 RNASE4P34096 147 aaKnown RBP4.13□□□□□ -1.75
LRCH3-212ENST00000466845 MPV17P39210 176 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 SYNJ2BPP57105 145 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 ZNF876PQ49A33 203 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 C7orf65Q6ZTY9 151 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 TMEM256Q8N2U0 113 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 LINC01555Q8NAE3 123 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 OPRPNQ99935 248 aaPredicted RBP4.13□□□□□ -1.75
LRCH3-212ENST00000466845 CYTL1Q9NRR1 136 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 EP300Q09472 2414 aaPredicted RBP4.13□□□□□ -1.75
LRCH3-212ENST00000466845 PTPRDP23468 1912 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 EML6Q6ZMW3 1958 aa4.13□□□□□ -1.75
LRCH3-212ENST00000466845 SPTBN4Q9H254 2564 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 MDFIC2A0A1B0GVS7 189 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 K7EQD1 137 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 ZNF324O75467 553 aaPredicted RBP4.12□□□□□ -1.75
LRCH3-212ENST00000466845 LTAP01374 205 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 HSPB1P04792 205 aaKnown RBP4.12□□□□□ -1.75
LRCH3-212ENST00000466845 SMIM13P0DJ93 91 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 SCGB1C2P0DMR2 95 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 KRTDAPP60985 99 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 CXCL6P80162 114 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 OR5AS1Q8N127 324 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 RNASE6Q93091 150 aaKnown RBP4.12□□□□□ -1.75
LRCH3-212ENST00000466845 DEC1Q9P2X7 70 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 OTOGLQ3ZCN5 2332 aa4.12□□□□□ -1.75
LRCH3-212ENST00000466845 GREB1Q4ZG55 1949 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 ANAPC1Q9H1A4 1944 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 ZNF292O60281 2723 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 HEATR5AQ86XA9 2040 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 FER1L5A0AVI2 2057 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 IGLV3-10A0A075B6K4 115 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 IGHV4OR15-8A0A075B7B6 117 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 TRAV14DV4A0A0A6YYC5 116 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 IGHV4-61A0A0C4DH41 118 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 UBE2L5PA0A1B0GUS4 154 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 SNRNP200O75643 2136 aaKnown RBP4.11□□□□□ -1.75
LRCH3-212ENST00000466845 SLC25A14O95258 325 aaPredicted RBP4.11□□□□□ -1.75
LRCH3-212ENST00000466845 IGHV4-59P01825 116 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 IGHV3-43DP0DP04 118 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 UBE2L3P68036 154 aaKnown RBP4.11□□□□□ -1.75
LRCH3-212ENST00000466845 CCL20P78556 96 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 CCL8P80075 99 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 CFAP126Q5VTH2 177 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 GUSBP11Q6P575 273 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 DIRC1Q969H9 104 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 ODF3Q96PU9 254 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 OR8B2Q96RD0 313 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 LINC00597Q9H2U6 94 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 SLC25A15Q9Y619 301 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 GPR179Q6PRD1 2367 aa4.11□□□□□ -1.75
LRCH3-212ENST00000466845 CEP250Q9BV73 2442 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 KIAA1549LQ6ZVL6 1849 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 IGHV1OR15-1A0A075B7D0 117 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 A0A087WYN8 130 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 TRAV2A0A0B4J234 112 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 TIMM17BO60830 172 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 IGLV2-8P01709 118 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 IGHV1-2P23083 117 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 HIST1H4AP62805 103 aaKnown RBP4.1□□□□□ -1.75
LRCH3-212ENST00000466845 RSPO1Q2MKA7 263 aaPredicted RBP4.1□□□□□ -1.75
LRCH3-212ENST00000466845 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 IGFL3Q6UXB1 125 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 TMEM136Q6ZRR5 245 aa4.1□□□□□ -1.75
LRCH3-212ENST00000466845 C2orf91Q6ZV80 131 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms