RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 KLKP1Q107X0 134 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 CCSMST1Q4G0I0 132 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 TRIQKQ629K1 86 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 C3orf33Q6P1S2 294 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 DHRS4L2Q6PKH6 230 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 IZUMO2Q6UXV1 221 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 LINC00305Q7Z4B0 112 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 LINC00269Q8N2A0 174 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 DMAC1Q96GE9 116 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 LINC00208Q96KT6 92 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 LXNQ9BS40 222 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 ATG5Q9H1Y0 275 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 C19orf12Q9NSK7 152 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 NUBP2Q9Y5Y2 271 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 FGD6Q6ZV73 1430 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 TRAPPC8Q9Y2L5 1435 aa0.04□□□□□ -2.4
CHMP2B-202ENST00000466696 TNCP24821 2201 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 SPAG17Q6Q759 2223 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 DLC1Q96QB1 1528 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 MYLKQ15746 1914 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 PTPN13Q12923 2485 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 PIK3C2AO00443 1686 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 TRAV13-1A0A0B4J241 112 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 TRAV17A0A0B4J275 112 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 IGHV1-24A0A0C4DH33 117 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 PNMA8CA0A1B0GUJ8 204 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 TRDV1A0A1B0GX56 115 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 E7EQ34 232 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 CFDP00746 253 aaPredicted RBP0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 IGF2P01344 180 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 CSN2P05814 226 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 S100A11P31949 105 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 LTC4SQ16873 150 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 CSAG1Q6PB30 78 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 PHF5AQ7RTV0 110 aaKnown RBP0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 SMIM20Q8N5G0 67 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 TEX29Q8N6K0 151 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 DIRC1Q969H9 104 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 TMEM141Q96I45 108 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 FKBP11Q9NYL4 201 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 MPC1Q9Y5U8 109 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 U3KQA8 63 aa0.03□□□□□ -2.4
CHMP2B-202ENST00000466696 UBR5O95071 2799 aaPredicted RBP0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 MYO5AQ9Y4I1 1855 aaKnown RBP0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 F8P00451 2351 aa0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 YTHDC2Q9H6S0 1430 aaKnown RBP0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 MYH7BA7E2Y1 1941 aa0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 CDK12Q9NYV4 1490 aaPredicted RBP0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 FANCMQ8IYD8 2048 aa0.03□□□□□ -2.41
CHMP2B-202ENST00000466696 NSD1Q96L73 2696 aaPredicted RBP0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 KDM6BO15054 1643 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 MYO7AQ13402 2215 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 CACNA1CQ13936 2221 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 ABCA4P78363 2273 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 COL24A1Q17RW2 1714 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 NUP98P52948 1817 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 TCRBV3S1A0A5B6 114 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 PPP5D1E7EU14 171 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 PGRMC1O00264 195 aaKnown RBP0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 CDC42EP2O14613 210 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 MFSD11O43934 449 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 IGKCP01834 107 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 APODP05090 189 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 CCKP06307 115 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 MPC1LP0DKB6 136 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 PCBD1P61457 104 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 PSPHP78330 225 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 RHOHQ15669 191 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 DCUN1D2Q6PH85 259 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 LYPD5Q6UWN5 251 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 STX12Q86Y82 276 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 C5orf56Q8N8D9 126 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 OR51A4Q8NGJ6 313 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 BRK1Q8WUW1 75 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 BPESC1Q9GZL8 116 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 OTORQ9NRC9 128 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 GID8Q9NWU2 228 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 BET1LQ9NYM9 111 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 IL20Q9NYY1 176 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 COMMD3Q9UBI1 195 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 UFC1Q9Y3C8 167 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 POLQO75417 2590 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 UNC79Q9P2D8 2635 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 TECPR2O15040 1411 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 COL7A1Q02388 2944 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 ASXL3Q9C0F0 2248 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 TRPM1Q7Z4N2 1603 aa0.02□□□□□ -2.41
CHMP2B-202ENST00000466696 PTPRFP10586 1907 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 ABCA2Q9BZC7 2435 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 TRAV12-2A0A075B6T6 113 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 BORCS7-ASMTA0A0B4J1R7 106 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 TRBV10-1A0A0K0K1A3 114 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 TRBV27A0A0K0K1C4 114 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 TEX49A0A1B0GTD5 131 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 C10orf142B7Z368 130 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 E5RI56 91 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 H3BMG7 143 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 COX4I1P13073 169 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 CRYGSP22914 178 aa0.01□□□□□ -2.41
CHMP2B-202ENST00000466696 BLCAPP62952 87 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms