RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 OR5AC2Q9NZP5 309 aa14.02□□□□□ -0.17
COL6A1-203ENST00000466285 ZNF492Q9P255 531 aa14.02□□□□□ -0.17
COL6A1-203ENST00000466285 PRELID1Q9Y255 219 aa14.02□□□□□ -0.17
COL6A1-203ENST00000466285 ICOSQ9Y6W8 199 aa14.02□□□□□ -0.17
COL6A1-203ENST00000466285 H0YIZ8 118 aa14.01□□□□□ -0.17
COL6A1-203ENST00000466285 SFTA3P0C7M3 94 aa14.01□□□□□ -0.17
COL6A1-203ENST00000466285 HBG1P69891 147 aa14.01□□□□□ -0.17
COL6A1-203ENST00000466285 HBG2P69892 147 aa14.01□□□□□ -0.17
COL6A1-203ENST00000466285 IBA57Q5T440 356 aaKnown RBP14.01□□□□□ -0.17
COL6A1-203ENST00000466285 OR5C1Q8NGR4 320 aa14.01□□□□□ -0.17
COL6A1-203ENST00000466285 MYCBP2O75592 4640 aa14.01□□□□□ -0.17
COL6A1-203ENST00000466285 RGS13O14921 159 aa14□□□□□ -0.17
COL6A1-203ENST00000466285 WFDC10BQ8IUB3 73 aa14□□□□□ -0.17
COL6A1-203ENST00000466285 MDFICQ9P1T7 246 aa14□□□□□ -0.17
COL6A1-203ENST00000466285 ALG5Q9Y673 324 aa14□□□□□ -0.17
COL6A1-203ENST00000466285 XGP55808 180 aa13.99□□□□□ -0.17
COL6A1-203ENST00000466285 TMEM78Q5T7P6 136 aa13.99□□□□□ -0.17
COL6A1-203ENST00000466285 LYPD5Q6UWN5 251 aa13.99□□□□□ -0.17
COL6A1-203ENST00000466285 AAMDCQ9H7C9 122 aa13.99□□□□□ -0.17
COL6A1-203ENST00000466285 NBEAP1P0C6P0 100 aa13.98□□□□□ -0.17
COL6A1-203ENST00000466285 KRTAP10-1P60331 282 aa13.98□□□□□ -0.17
COL6A1-203ENST00000466285 LRRC37A5PQ49AS3 106 aa13.98□□□□□ -0.17
COL6A1-203ENST00000466285 ZNF479Q96JC4 524 aa13.98□□□□□ -0.17
COL6A1-203ENST00000466285 ZNF138P52744 262 aa13.97□□□□□ -0.17
COL6A1-203ENST00000466285 ATP6V1FQ16864 119 aa13.97□□□□□ -0.17
COL6A1-203ENST00000466285 ARPC5LQ9BPX5 153 aa13.97□□□□□ -0.17
COL6A1-203ENST00000466285 OR51M1Q9H341 326 aa13.97□□□□□ -0.17
COL6A1-203ENST00000466285 PRO0255Q9UI72 69 aa13.97□□□□□ -0.17
COL6A1-203ENST00000466285 DNAH8Q96JB1 4490 aa13.97□□□□□ -0.17
COL6A1-203ENST00000466285 E5RGE8 158 aa13.96□□□□□ -0.17
COL6A1-203ENST00000466285 NMBP08949 121 aa13.96□□□□□ -0.17
COL6A1-203ENST00000466285 HAMPP81172 84 aa13.96□□□□□ -0.17
COL6A1-203ENST00000466285 ZNF415Q09FC8 603 aa13.96□□□□□ -0.17
COL6A1-203ENST00000466285 PAXXQ9BUH6 204 aa13.96□□□□□ -0.17
COL6A1-203ENST00000466285 WDR61Q9GZS3 305 aaKnown RBP13.96□□□□□ -0.17
COL6A1-203ENST00000466285 HHLA3Q9XRX5 114 aa13.96□□□□□ -0.17
COL6A1-203ENST00000466285 A0A087WTM6 91 aa13.95□□□□□ -0.18
COL6A1-203ENST00000466285 LOC100131303A0A0U1RQF7 123 aa13.95□□□□□ -0.18
COL6A1-203ENST00000466285 K7EQD1 137 aa13.95□□□□□ -0.18
COL6A1-203ENST00000466285 EPM2AB3EWF7 344 aa13.94□□□□□ -0.18
COL6A1-203ENST00000466285 ERVFC1-1P60608 527 aa13.94□□□□□ -0.18
COL6A1-203ENST00000466285 OR7C2O60412 319 aa13.93□□□□□ -0.18
COL6A1-203ENST00000466285 H2BFSP57053 126 aa13.93□□□□□ -0.18
COL6A1-203ENST00000466285 RANP62826 216 aaKnown RBP13.93□□□□□ -0.18
COL6A1-203ENST00000466285 ZNF266Q14584 549 aa13.93□□□□□ -0.18
COL6A1-203ENST00000466285 TMEM183BQ1AE95 376 aa13.93□□□□□ -0.18
COL6A1-203ENST00000466285 TMEM183AQ8IXX5 376 aa13.93□□□□□ -0.18
COL6A1-203ENST00000466285 LYPD1Q8N2G4 141 aa13.93□□□□□ -0.18
COL6A1-203ENST00000466285 MRPL32Q9BYC8 188 aaKnown RBP13.93□□□□□ -0.18
COL6A1-203ENST00000466285 MRPL23Q16540 153 aaKnown RBP13.92□□□□□ -0.18
COL6A1-203ENST00000466285 Q6ZNX1 250 aa13.92□□□□□ -0.18
COL6A1-203ENST00000466285 NEGR1Q7Z3B1 354 aa13.92□□□□□ -0.18
COL6A1-203ENST00000466285 DMBT1Q9UGM3 2413 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-203ENST00000466285 TRGV4A0A0C4DH28 118 aa13.91□□□□□ -0.18
COL6A1-203ENST00000466285 SSNA1O43805 119 aa13.91□□□□□ -0.18
COL6A1-203ENST00000466285 GYPEP15421 78 aa13.91□□□□□ -0.18
COL6A1-203ENST00000466285 UBE2L3P68036 154 aaKnown RBP13.91□□□□□ -0.18
COL6A1-203ENST00000466285 Q6AWC8 147 aa13.91□□□□□ -0.18
COL6A1-203ENST00000466285 OR10G4Q8NGN3 311 aa13.91□□□□□ -0.18
COL6A1-203ENST00000466285 NMES1Q9C002 83 aa13.91□□□□□ -0.18
COL6A1-203ENST00000466285 Q5VSD8 79 aa13.9□□□□□ -0.18
COL6A1-203ENST00000466285 NAGKQ9UJ70 344 aa13.9□□□□□ -0.18
COL6A1-203ENST00000466285 LY96Q9Y6Y9 160 aa13.9□□□□□ -0.18
COL6A1-203ENST00000466285 FLG2Q5D862 2391 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-203ENST00000466285 DIRC3C9JPN6 131 aa13.89□□□□□ -0.19
COL6A1-203ENST00000466285 F6UZH7 168 aa13.89□□□□□ -0.19
COL6A1-203ENST00000466285 SRIP30626 198 aa13.89□□□□□ -0.19
COL6A1-203ENST00000466285 TVP23CQ96ET8 276 aa13.89□□□□□ -0.19
COL6A1-203ENST00000466285 PGPEP1Q9NXJ5 209 aa13.89□□□□□ -0.19
COL6A1-203ENST00000466285 RPH3ALQ9UNE2 315 aa13.89□□□□□ -0.19
COL6A1-203ENST00000466285 TRBV7-9A0A0J9YWB2 115 aa13.88□□□□□ -0.19
COL6A1-203ENST00000466285 RBAKDNA6NC62 111 aa13.88□□□□□ -0.19
COL6A1-203ENST00000466285 FFAR4Q5NUL3 377 aa13.88□□□□□ -0.19
COL6A1-203ENST00000466285 RASL10AQ92737 203 aa13.88□□□□□ -0.19
COL6A1-203ENST00000466285 SMIM3Q9BZL3 60 aa13.88□□□□□ -0.19
COL6A1-203ENST00000466285 SLC25A31Q9H0C2 315 aa13.88□□□□□ -0.19
COL6A1-203ENST00000466285 MSRB1Q9NZV6 116 aa13.88□□□□□ -0.19
COL6A1-203ENST00000466285 TRAV8-1A0A0A6YYK1 113 aa13.87□□□□□ -0.19
COL6A1-203ENST00000466285 IGHV3-16A0A0C4DH30 117 aa13.87□□□□□ -0.19
COL6A1-203ENST00000466285 GNRH2O43555 120 aa13.87□□□□□ -0.19
COL6A1-203ENST00000466285 SMR3BP02814 79 aaPredicted RBP13.87□□□□□ -0.19
COL6A1-203ENST00000466285 INAFM2P0DMQ5 153 aa13.87□□□□□ -0.19
COL6A1-203ENST00000466285 CDPF1Q6NVV7 123 aa13.87□□□□□ -0.19
COL6A1-203ENST00000466285 HYLS1Q96M11 299 aa13.87□□□□□ -0.19
COL6A1-203ENST00000466285 ATP5SQ99766 215 aa13.87□□□□□ -0.19
COL6A1-203ENST00000466285 MED28Q9H204 178 aa13.87□□□□□ -0.19
COL6A1-203ENST00000466285 CYCSP99999 105 aaKnown RBP13.86□□□□□ -0.19
COL6A1-203ENST00000466285 SLAQ13239 276 aa13.86□□□□□ -0.19
COL6A1-203ENST00000466285 IQCF2Q8IXL9 164 aa13.86□□□□□ -0.19
COL6A1-203ENST00000466285 WFDC1Q9HC57 220 aa13.86□□□□□ -0.19
COL6A1-203ENST00000466285 SRRM2Q9UQ35 2752 aaKnown RBP13.85□□□□□ -0.19
COL6A1-203ENST00000466285 TYMSP04818 313 aa13.85□□□□□ -0.19
COL6A1-203ENST00000466285 GNG5P63218 68 aa13.85□□□□□ -0.19
COL6A1-203ENST00000466285 PPP1R1CQ8WVI7 109 aa13.85□□□□□ -0.19
COL6A1-203ENST00000466285 ASB13Q8WXK3 278 aa13.85□□□□□ -0.19
COL6A1-203ENST00000466285 KCNIP2Q9NS61 270 aa13.85□□□□□ -0.19
COL6A1-203ENST00000466285 HSPB11Q9Y547 144 aa13.85□□□□□ -0.19
COL6A1-203ENST00000466285 TRAV4A0A0B4J268 109 aa13.84□□□□□ -0.19
COL6A1-203ENST00000466285 EREGO14944 169 aa13.84□□□□□ -0.19
COL6A1-203ENST00000466285 CSN1S1P47710 185 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms