RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 TMEM242Q9NWH2 141 aa16.08■□□□□ 0.17
ITGA4-204ENST00000465522 J3KRW8 73 aa16.08■□□□□ 0.16
ITGA4-204ENST00000465522 WIPF1O43516 503 aa16.08■□□□□ 0.16
ITGA4-204ENST00000465522 PRR31Q5SQ13 230 aa16.08■□□□□ 0.16
ITGA4-204ENST00000465522 FAM162BQ5T6X4 162 aa16.08■□□□□ 0.16
ITGA4-204ENST00000465522 TMEM88Q6PEY1 159 aa16.08■□□□□ 0.16
ITGA4-204ENST00000465522 C19orf71A6NCJ1 209 aa16.07■□□□□ 0.16
ITGA4-204ENST00000465522 ZNF705GA8MUZ8 300 aaPredicted RBP16.07■□□□□ 0.16
ITGA4-204ENST00000465522 GPX1P07203 203 aa16.07■□□□□ 0.16
ITGA4-204ENST00000465522 ZNF80P51504 273 aaPredicted RBP16.07■□□□□ 0.16
ITGA4-204ENST00000465522 GTSCR1Q86UQ5 136 aa16.07■□□□□ 0.16
ITGA4-204ENST00000465522 ZFAND2AQ8N6M9 145 aa16.07■□□□□ 0.16
ITGA4-204ENST00000465522 FABP5P3A8MUU1 101 aa16.06■□□□□ 0.16
ITGA4-204ENST00000465522 GATCO43716 136 aaKnown RBP16.06■□□□□ 0.16
ITGA4-204ENST00000465522 P01737 135 aa16.06■□□□□ 0.16
ITGA4-204ENST00000465522 CRISP2P16562 243 aa16.06■□□□□ 0.16
ITGA4-204ENST00000465522 BTN1A1Q13410 526 aa16.06■□□□□ 0.16
ITGA4-204ENST00000465522 ODF3Q96PU9 254 aa16.06■□□□□ 0.16
ITGA4-204ENST00000465522 ANK2Q01484 3957 aa16.06■□□□□ 0.16
ITGA4-204ENST00000465522 LEPP41159 167 aa16.05■□□□□ 0.16
ITGA4-204ENST00000465522 CBLN2Q8IUK8 224 aa16.05■□□□□ 0.16
ITGA4-204ENST00000465522 STHQ8IWL8 128 aa16.05■□□□□ 0.16
ITGA4-204ENST00000465522 SMCO4Q9NRQ5 59 aa16.05■□□□□ 0.16
ITGA4-204ENST00000465522 C19orf73Q9NVV2 129 aa16.05■□□□□ 0.16
ITGA4-204ENST00000465522 V9GYV3 84 aa16.05■□□□□ 0.16
ITGA4-204ENST00000465522 SH2D1AO60880 128 aa16.05■□□□□ 0.16
ITGA4-204ENST00000465522 TSPOP30536 169 aa16.05■□□□□ 0.16
ITGA4-204ENST00000465522 PFN1P07737 140 aaKnown RBP16.04■□□□□ 0.16
ITGA4-204ENST00000465522 RNASE4P34096 147 aaKnown RBP16.04■□□□□ 0.16
ITGA4-204ENST00000465522 OXLD1Q5BKU9 147 aa16.04■□□□□ 0.16
ITGA4-204ENST00000465522 AMTNQ6UX39 209 aa16.04■□□□□ 0.16
ITGA4-204ENST00000465522 CXorf65A6NEN9 183 aa16.03■□□□□ 0.16
ITGA4-204ENST00000465522 A8MTW9 85 aa16.03■□□□□ 0.16
ITGA4-204ENST00000465522 CDKN1BP46527 198 aa16.03■□□□□ 0.16
ITGA4-204ENST00000465522 PRR9Q5T870 116 aa16.03■□□□□ 0.16
ITGA4-204ENST00000465522 WFDC10AQ9H1F0 79 aa16.03■□□□□ 0.16
ITGA4-204ENST00000465522 M0R2Z0 102 aa16.02■□□□□ 0.16
ITGA4-204ENST00000465522 RIPPLY3P57055 190 aa16.02■□□□□ 0.16
ITGA4-204ENST00000465522 KIR3DS1Q14943 382 aa16.02■□□□□ 0.16
ITGA4-204ENST00000465522 RPP21Q9H633 154 aaKnown RBP16.02■□□□□ 0.16
ITGA4-204ENST00000465522 KLLNB2CW77 178 aa16.02■□□□□ 0.15
ITGA4-204ENST00000465522 SPINK13Q1W4C9 94 aa16.02■□□□□ 0.15
ITGA4-204ENST00000465522 CLUHP3Q96NS8 147 aa16.02■□□□□ 0.15
ITGA4-204ENST00000465522 OR2D3Q8NGH3 330 aa16.01■□□□□ 0.15
ITGA4-204ENST00000465522 TUBA4BQ9H853 241 aa16.01■□□□□ 0.15
ITGA4-204ENST00000465522 URGCP-MRPS24S4R325 110 aa16.01■□□□□ 0.15
ITGA4-204ENST00000465522 TRAV21A0A0B4J279 112 aa16■□□□□ 0.15
ITGA4-204ENST00000465522 CA1P00915 261 aaPredicted RBP16■□□□□ 0.15
ITGA4-204ENST00000465522 ORM1P02763 201 aa16■□□□□ 0.15
ITGA4-204ENST00000465522 FXYD7P58549 80 aa16■□□□□ 0.15
ITGA4-204ENST00000465522 IL36BQ9NZH7 164 aa16■□□□□ 0.15
ITGA4-204ENST00000465522 CMYA5Q8N3K9 4069 aa16■□□□□ 0.15
ITGA4-204ENST00000465522 TRAV12-2A0A075B6T6 113 aa15.99■□□□□ 0.15
ITGA4-204ENST00000465522 RBMY1BA6NDE4 496 aaKnown RBP15.99■□□□□ 0.15
ITGA4-204ENST00000465522 RBMY1EA6NEQ0 496 aaKnown RBP15.99■□□□□ 0.15
ITGA4-204ENST00000465522 RBMY1DP0C7P1 496 aaKnown RBP15.99■□□□□ 0.15
ITGA4-204ENST00000465522 Q6AWC8 147 aa15.99■□□□□ 0.15
ITGA4-204ENST00000465522 TRPT1Q86TN4 253 aaKnown RBP15.99■□□□□ 0.15
ITGA4-204ENST00000465522 DEFB125Q8N687 156 aa15.99■□□□□ 0.15
ITGA4-204ENST00000465522 TMEM189A5PLL7 270 aa15.99■□□□□ 0.15
ITGA4-204ENST00000465522 S100PP25815 95 aa15.99■□□□□ 0.15
ITGA4-204ENST00000465522 RPL19P84098 196 aaKnown RBP15.99■□□□□ 0.15
ITGA4-204ENST00000465522 CT83Q5H943 113 aa15.99■□□□□ 0.15
ITGA4-204ENST00000465522 Q6ZQT7 251 aa15.99■□□□□ 0.15
ITGA4-204ENST00000465522 IMMP2LQ96T52 175 aa15.99■□□□□ 0.15
ITGA4-204ENST00000465522 C7orf71A4D174 169 aa15.98■□□□□ 0.15
ITGA4-204ENST00000465522 A8MWL6 223 aa15.98■□□□□ 0.15
ITGA4-204ENST00000465522 NUTF2P61970 127 aaKnown RBP15.98■□□□□ 0.15
ITGA4-204ENST00000465522 GFI1BQ5VTD9 330 aa15.98■□□□□ 0.15
ITGA4-204ENST00000465522 KCNIP4Q6PIL6 250 aa15.98■□□□□ 0.15
ITGA4-204ENST00000465522 TRAV12-3A0A0B4J271 114 aa15.97■□□□□ 0.15
ITGA4-204ENST00000465522 FAM3BP58499 235 aaPredicted RBP15.97■□□□□ 0.15
ITGA4-204ENST00000465522 TSKUQ8WUA8 353 aa15.97■□□□□ 0.15
ITGA4-204ENST00000465522 TMSB15BA0A087X1C1 80 aa15.97■□□□□ 0.15
ITGA4-204ENST00000465522 C11orf21Q9P2W6 132 aa15.97■□□□□ 0.15
ITGA4-204ENST00000465522 XKRY2A2RUG3 117 aa15.96■□□□□ 0.15
ITGA4-204ENST00000465522 ELOBQ15370 118 aa15.96■□□□□ 0.15
ITGA4-204ENST00000465522 LINC01559Q495D7 138 aa15.96■□□□□ 0.15
ITGA4-204ENST00000465522 ZMAT5Q9UDW3 170 aaKnown RBP15.96■□□□□ 0.15
ITGA4-204ENST00000465522 SMIM27A0A1W2PRY6 76 aa15.95■□□□□ 0.14
ITGA4-204ENST00000465522 ZNF324O75467 553 aaPredicted RBP15.95■□□□□ 0.14
ITGA4-204ENST00000465522 GZMBP10144 247 aa15.95■□□□□ 0.14
ITGA4-204ENST00000465522 TCL1AP56279 114 aa15.95■□□□□ 0.14
ITGA4-204ENST00000465522 Q8N1Y9 231 aa15.95■□□□□ 0.14
ITGA4-204ENST00000465522 NAGKQ9UJ70 344 aa15.95■□□□□ 0.14
ITGA4-204ENST00000465522 CRXO43186 299 aaPredicted RBP15.94■□□□□ 0.14
ITGA4-204ENST00000465522 RPL35AP18077 110 aaKnown RBP15.94■□□□□ 0.14
ITGA4-204ENST00000465522 RPS20P60866 119 aaKnown RBP15.94■□□□□ 0.14
ITGA4-204ENST00000465522 IGKV3D-20A0A0C4DH25 116 aa15.94■□□□□ 0.14
ITGA4-204ENST00000465522 EGFEM1PQ0D2K5 195 aa15.94■□□□□ 0.14
ITGA4-204ENST00000465522 NEU1Q99519 415 aa15.94■□□□□ 0.14
ITGA4-204ENST00000465522 GFRA4Q9GZZ7 299 aa15.94■□□□□ 0.14
ITGA4-204ENST00000465522 A0A1W2PPQ1 181 aa15.93■□□□□ 0.14
ITGA4-204ENST00000465522 AMBPP02760 352 aa15.93■□□□□ 0.14
ITGA4-204ENST00000465522 MUC21Q5SSG8 566 aa15.93■□□□□ 0.14
ITGA4-204ENST00000465522 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.93■□□□□ 0.14
ITGA4-204ENST00000465522 SRD5A3Q9H8P0 318 aa15.93■□□□□ 0.14
ITGA4-204ENST00000465522 XCL2Q9UBD3 114 aa15.93■□□□□ 0.14
ITGA4-204ENST00000465522 NAT8BQ9UHF3 227 aa15.93■□□□□ 0.14
ITGA4-204ENST00000465522 FAM231BA6NCW3 169 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms