RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 ATP5L2Q7Z4Y8 100 aa12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 DAZAP1Q96EP5 407 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 SLC50A1Q9BRV3 221 aa12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 MRPL18Q9H0U6 180 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 ZNF331Q9NQX6 463 aaPredicted RBP12.7□□□□□ -0.38
EXOSC3-203ENST00000465229 NOTCH1P46531 2555 aa12.69□□□□□ -0.38
EXOSC3-203ENST00000465229 IGKV3-7A0A075B6H7 116 aa12.69□□□□□ -0.38
EXOSC3-203ENST00000465229 M0R3E3 92 aa12.69□□□□□ -0.38
EXOSC3-203ENST00000465229 WIPF1O43516 503 aa12.69□□□□□ -0.38
EXOSC3-203ENST00000465229 RBPMS2Q6ZRY4 209 aaKnown RBP12.69□□□□□ -0.38
EXOSC3-203ENST00000465229 NBEAL1Q6ZS30 2694 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 TRAV25A0A0B4J276 109 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 ZNF785A8K8V0 405 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 SNURFLB1AK76 121 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 CA1P00915 261 aaPredicted RBP12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 HLA-DQA1P01909 254 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 TCL1AP56279 114 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 OXLD1Q5BKU9 147 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 GFI1BQ5VTD9 330 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 LINC00322Q6ZN03 302 aaPredicted RBP12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 TMEM136Q6ZRR5 245 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 GBGT1Q8N5D6 347 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 NUP35Q8NFH5 326 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 GPR61Q9BZJ8 451 aa12.68□□□□□ -0.38
EXOSC3-203ENST00000465229 OR2K2Q8NGT1 345 aa12.67□□□□□ -0.38
EXOSC3-203ENST00000465229 NEU1Q99519 415 aa12.67□□□□□ -0.38
EXOSC3-203ENST00000465229 MS4A6AQ9H2W1 248 aa12.67□□□□□ -0.38
EXOSC3-203ENST00000465229 CLEC5AQ9NY25 188 aa12.67□□□□□ -0.38
EXOSC3-203ENST00000465229 SAPCD1Q5SSQ6 148 aa12.66□□□□□ -0.38
EXOSC3-203ENST00000465229 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.66□□□□□ -0.38
EXOSC3-203ENST00000465229 MRPL53Q96EL3 112 aaKnown RBP12.66□□□□□ -0.38
EXOSC3-203ENST00000465229 NRN1Q9NPD7 142 aa12.66□□□□□ -0.38
EXOSC3-203ENST00000465229 RBAKDNA6NC62 111 aa12.66□□□□□ -0.38
EXOSC3-203ENST00000465229 HIGD1CA8MV81 97 aa12.66□□□□□ -0.38
EXOSC3-203ENST00000465229 LCN12Q6JVE5 192 aa12.66□□□□□ -0.38
EXOSC3-203ENST00000465229 DCANP1Q8TF63 244 aa12.66□□□□□ -0.38
EXOSC3-203ENST00000465229 ZC2HC1AQ96GY0 325 aa12.66□□□□□ -0.38
EXOSC3-203ENST00000465229 TFPI2P48307 235 aa12.65□□□□□ -0.38
EXOSC3-203ENST00000465229 FOXA3P55318 350 aaPredicted RBP12.65□□□□□ -0.38
EXOSC3-203ENST00000465229 PAFAH1B2P68402 229 aa12.65□□□□□ -0.38
EXOSC3-203ENST00000465229 MRPL54Q6P161 138 aaKnown RBP12.65□□□□□ -0.38
EXOSC3-203ENST00000465229 WFDC3Q8IUB2 231 aa12.65□□□□□ -0.38
EXOSC3-203ENST00000465229 HIST1H2BLQ99880 126 aa12.65□□□□□ -0.38
EXOSC3-203ENST00000465229 SPAG8Q99932 426 aaPredicted RBP12.65□□□□□ -0.38
EXOSC3-203ENST00000465229 A0A1B0GXF2 115 aa12.64□□□□□ -0.39
EXOSC3-203ENST00000465229 FRMD6-AS1P0C7T7 363 aa12.64□□□□□ -0.39
EXOSC3-203ENST00000465229 ZNF256Q9Y2P7 627 aaPredicted RBP12.64□□□□□ -0.39
EXOSC3-203ENST00000465229 K7EQG2 157 aa12.63□□□□□ -0.39
EXOSC3-203ENST00000465229 SOCS3O14543 225 aa12.63□□□□□ -0.39
EXOSC3-203ENST00000465229 SPINK4O60575 86 aa12.63□□□□□ -0.39
EXOSC3-203ENST00000465229 CT45A10P0DMU9 189 aa12.63□□□□□ -0.39
EXOSC3-203ENST00000465229 Q0VG73 95 aa12.63□□□□□ -0.39
EXOSC3-203ENST00000465229 TRAV2A0A0B4J234 112 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 G3V4G9 280 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 FABP4P15090 132 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 CRISP2P16562 243 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 OR10D4PQ8NGN7 298 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 GTSF1Q8WW33 167 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 PRR25Q96S07 402 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 IGKV2-40A0A087WW87 121 aaPredicted RBP12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 IGKV2D-40P01614 121 aaPredicted RBP12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 BEAN1Q3B7T3 259 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 PDZD11Q5EBL8 140 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 DNLZQ5SXM8 178 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 SAMD5Q5TGI4 173 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 IGFL4Q6B9Z1 124 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 OR2D3Q8NGH3 330 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 C16orf92Q96LL3 132 aa12.62□□□□□ -0.39
EXOSC3-203ENST00000465229 TRAV8-2A0A0B4J237 113 aa12.61□□□□□ -0.39
EXOSC3-203ENST00000465229 OR4C46A6NHA9 309 aa12.61□□□□□ -0.39
EXOSC3-203ENST00000465229 AMBPP02760 352 aa12.61□□□□□ -0.39
EXOSC3-203ENST00000465229 ESDP10768 282 aa12.61□□□□□ -0.39
EXOSC3-203ENST00000465229 CRIP1P50238 77 aa12.61□□□□□ -0.39
EXOSC3-203ENST00000465229 RAB4BP61018 213 aa12.61□□□□□ -0.39
EXOSC3-203ENST00000465229 OR10J3Q5JRS4 329 aa12.61□□□□□ -0.39
EXOSC3-203ENST00000465229 Q6AWC8 147 aa12.61□□□□□ -0.39
EXOSC3-203ENST00000465229 TMEM18Q96B42 140 aa12.61□□□□□ -0.39
EXOSC3-203ENST00000465229 PACRGQ96M98 296 aaPredicted RBP12.61□□□□□ -0.39
EXOSC3-203ENST00000465229 APCSP02743 223 aa12.6□□□□□ -0.39
EXOSC3-203ENST00000465229 HBBP68871 147 aa12.6□□□□□ -0.39
EXOSC3-203ENST00000465229 EGFEM1PQ0D2K5 195 aa12.6□□□□□ -0.39
EXOSC3-203ENST00000465229 FAM162BQ5T6X4 162 aa12.6□□□□□ -0.39
EXOSC3-203ENST00000465229 HLA-DMBP28068 263 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 KRTAP10-11P60412 298 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 SAMD13Q5VXD3 122 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 C8orf49Q96NF6 230 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 VGLL1Q99990 258 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 NDFIP1Q9BT67 221 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 PPP1R14DQ9NXH3 145 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 ZNF705FA8MVS1 300 aaPredicted RBP12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 ZNF688P0C7X2 276 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 ID1P41134 155 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 PYY3Q5JQD4 70 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 RNF182Q8N6D2 247 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 C20orf173Q96LM9 149 aa12.59□□□□□ -0.39
EXOSC3-203ENST00000465229 A0A1B0GW15 77 aa12.58□□□□□ -0.4
EXOSC3-203ENST00000465229 CD7P09564 240 aa12.58□□□□□ -0.4
EXOSC3-203ENST00000465229 GDF5OSQ5U4N7 250 aa12.58□□□□□ -0.4
EXOSC3-203ENST00000465229 GRIFINA4D1Z8 144 aa12.57□□□□□ -0.4
EXOSC3-203ENST00000465229 RPS20P60866 119 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms