RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ACOT12Q8WYK0 555 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 ZNF2Q9BSG1 426 aaPredicted RBP2.85□□□□□ -1.95
UBR4-209ENST00000465036 SAMD10Q9BYL1 202 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 RYR2Q92736 4967 aa2.85□□□□□ -1.95
UBR4-209ENST00000465036 STARD9Q9P2P6 4700 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 IGHV6-1A0A0B4J1U7 121 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 LOC389332A0A1B0GUA5 103 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 PGLYRP1O75594 196 aaPredicted RBP2.84□□□□□ -1.95
UBR4-209ENST00000465036 S1PR2O95136 353 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 IGKV1-39P01597 117 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 TRGV3P03979 118 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 CD3DP04234 171 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 IGKV1D-39P04432 117 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 REG1AP05451 166 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 CXCL2P19875 107 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 CTRLP40313 264 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 RPL5P46777 297 aaKnown RBP2.84□□□□□ -1.95
UBR4-209ENST00000465036 H2BFSP57053 126 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 TPPP2P59282 170 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 IFITM2Q01629 132 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 VMA21Q3ZAQ7 101 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 AADACL3Q5VUY0 350 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 SPATA31B1PQ5VZV4 182 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 OR1L8Q8NGR8 309 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 OR5H2Q8NGV7 314 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 DCUN1D4Q92564 292 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 BTF3L4Q96K17 158 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 TIMM17AQ99595 171 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 HSD17B10Q99714 261 aaKnown RBP2.84□□□□□ -1.95
UBR4-209ENST00000465036 SIGMAR1Q99720 223 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 ZNF355PQ9NSJ1 428 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 SMPXQ9UHP9 88 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 S4R3C0 116 aa2.84□□□□□ -1.95
UBR4-209ENST00000465036 TRAV8-3A0A0A6YYJ7 113 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 TEX50A0A1B0GTY4 177 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 SMIM31A0A1B0GVY4 71 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 NDUFC2-KCTD14E9PQ53 114 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 DNASE2O00115 360 aaPredicted RBP2.83□□□□□ -1.96
UBR4-209ENST00000465036 RGS5O15539 181 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 OR2A4O95047 310 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 LGALS1P09382 135 aaKnown RBP2.83□□□□□ -1.96
UBR4-209ENST00000465036 SLC6A1P30531 599 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 G6PCP35575 357 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 LPAR6P43657 344 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 CRYBA4P53673 196 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 TMBIM6P55061 237 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 RAB5BP61020 215 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 RHOGP84095 191 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 RUNX1Q01196 453 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 TNFRSF9Q07011 255 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 ZNF616Q08AN1 781 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 TMEM267Q0VDI3 215 aaPredicted RBP2.83□□□□□ -1.96
UBR4-209ENST00000465036 SCGB1D4Q6XE38 83 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 LHFPL1Q86WI0 220 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 LINC00337Q8N6G1 96 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 TCTEX1D1Q8N7M0 179 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 SLC35G3Q8N808 338 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 TMEM167AQ8TBQ9 72 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 RAB2BQ8WUD1 216 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 ISOC1Q96CN7 298 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 FXYD5Q96DB9 178 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 KCNS1Q96KK3 526 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 OR2A7Q96R45 310 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 LINC01587Q99440 93 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 RTBDNQ9BSG5 229 aaPredicted RBP2.83□□□□□ -1.96
UBR4-209ENST00000465036 C6orf62Q9GZU0 229 aaPredicted RBP2.83□□□□□ -1.96
UBR4-209ENST00000465036 COA4Q9NYJ1 87 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 RBM12B-AS1Q9P1G2 102 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 PRELID3BQ9Y3B1 194 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
UBR4-209ENST00000465036 IGHV3-21A0A0B4J1V1 117 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 IGHV3-74A0A0B4J1X5 117 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 IGLC7A0M8Q6 106 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 PLAC8L1A1L4L8 177 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 CCDC160A6NGH7 325 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 ZNF705GA8MUZ8 300 aaPredicted RBP2.82□□□□□ -1.96
UBR4-209ENST00000465036 PPP5D1E7EU14 171 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 GPR31O00270 319 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 OVOL1O14753 267 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 RBFOX2O43251 390 aaKnown RBP eCLIP2.82□□□□□ -1.96
UBR4-209ENST00000465036 HRASP01112 189 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 KRASP01116 189 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 HSPB1P04792 205 aaKnown RBP2.82□□□□□ -1.96
UBR4-209ENST00000465036 ATP5G1P05496 136 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 RPL27AP46776 148 aaKnown RBP2.82□□□□□ -1.96
UBR4-209ENST00000465036 WT1-ASQ06250 92 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 CATR1Q13166 79 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 MSMO1Q15800 293 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 SP6Q3SY56 376 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 DEFB121Q5J5C9 76 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 CEMP1Q6PRD7 247 aaPredicted RBP2.82□□□□□ -1.96
UBR4-209ENST00000465036 IL34Q6ZMJ4 242 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 TTC9CQ8N5M4 171 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 OR4C16Q8NGL9 310 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 OR13C8Q8NGS7 320 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 MCFD2Q8NI22 146 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 DIRAS2Q96HU8 199 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 TP53RKQ96S44 253 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 PAXXQ9BUH6 204 aa2.82□□□□□ -1.96
UBR4-209ENST00000465036 BET1LQ9NYM9 111 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms