RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 SRP9P49458 86 aaKnown RBP0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 CAV3P56539 151 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 FXYD6P3P58550 94 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 TFAMQ00059 246 aaKnown RBP0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 Q86TA4 180 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 OR51A4Q8NGJ6 313 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 DDA1Q9BW61 102 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 CBLN4Q9NTU7 201 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 MEGF8Q7Z7M0 2845 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 PTPRGP23470 1445 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 A2MP01023 1474 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 ARAP1Q96P48 1450 aa0.1□□□□□ -2.39
NUCKS1-202ENST00000464938 BDP1A6H8Y1 2624 aa0.09□□□□□ -2.39
NUCKS1-202ENST00000464938 A0A1B0GV72 72 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 LOC107986453A0A1B0GWG9 222 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 PRORSD1PA6NEY8 169 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 IFITM5A6NNB3 132 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 C5orf58C9J3I9 102 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 SULT1C4O75897 302 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 LY6G6CO95867 125 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 EVI2AP22794 236 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 CRYGSP22914 178 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 DNAJB13P59910 316 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 RPL37P61927 97 aaKnown RBP0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 FXYD3Q14802 87 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 ASB16-AS1Q495Z4 193 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 GLYATL3Q5SZD4 288 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 TEX29Q8N6K0 151 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 C5orf56Q8N8D9 126 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 C5orf17Q8NAS9 161 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 TMEM229BQ8NBD8 167 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 LXNQ9BS40 222 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 FKBP11Q9NYL4 201 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 ANK1P16157 1881 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 CACNA1EQ15878 2313 aa0.09□□□□□ -2.4
NUCKS1-202ENST00000464938 MED23Q9ULK4 1368 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 FER1L6Q2WGJ9 1857 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 A0A1W2PPB8 328 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 A0A1W2PRS3 328 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 ARL5CA6NH57 179 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 KIR3DP1A8MWS1 328 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 H3BMG7 143 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 PFDN1O60925 122 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 SLC25A4P12235 298 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 RPL22P35268 128 aaKnown RBP0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 QRFPP83859 136 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 SPINK13Q1W4C9 94 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 C3orf62Q6ZUJ4 267 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 OR5A2Q8NGI9 324 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 OR9Q1Q8NGQ5 310 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 LINC00208Q96KT6 92 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 CCDC115Q96NT0 180 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 AP1S3Q96PC3 154 aa0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 CDK12Q9NYV4 1490 aaPredicted RBP0.08□□□□□ -2.4
NUCKS1-202ENST00000464938 SPTBP11277 2137 aa0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 BLMP54132 1417 aaPredicted RBP0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 HBDP02042 147 aa0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 SNRPD3P62318 126 aaKnown RBP0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 BLCAPP62952 87 aa0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 TMEM128Q5BJH2 165 aa0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 Q5XG85 94 aa0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 TRAPPC2LQ9UL33 140 aa0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 V9GYQ6 96 aa0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 NAV2Q8IVL1 2488 aa0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 BCORL1Q5H9F3 1711 aa0.07□□□□□ -2.4
NUCKS1-202ENST00000464938 CPDO75976 1380 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 GPR98Q8WXG9 6306 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 ARHGAP31Q2M1Z3 1444 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 ZCCHC6Q5VYS8 1495 aaKnown RBP0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 A0A096LNT2 108 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 LOC101927531A0A1B0GV80 90 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 TMEM30CPA0ZSE6 113 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 TMEM189A5PLL7 270 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 BBIP1A8MTZ0 92 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 M0QZK8 103 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 PGRMC1O00264 195 aaKnown RBP0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 CDC42EP2O14613 210 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 UQCRQO14949 82 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 EDF1O60869 148 aaKnown RBP0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 IFNA21P01568 189 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 ETV6P41212 452 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 GTF2A1P52655 376 aaPredicted RBP0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 RPS28P62857 69 aaKnown RBP0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 SAMD13Q5VXD3 122 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 LYPD5Q6UWN5 251 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 OR4S1Q8NGB4 309 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 OTOSQ8NHW6 89 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 DMAC1Q96GE9 116 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 MRPL36Q9P0J6 103 aaKnown RBP0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 COMMD3Q9UBI1 195 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 LOC285556D6RIA3 1793 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 KIDINS220Q9ULH0 1771 aa0.06□□□□□ -2.4
NUCKS1-202ENST00000464938 LRP5O75197 1615 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 OVOS2A0A0G2JMS6 1433 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 TNCP24821 2201 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 PIEZO1Q92508 2521 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 LOC107984156A0A0G2JMH3 177 aa0.05□□□□□ -2.4
NUCKS1-202ENST00000464938 HIGD1CA8MV81 97 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms