RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ANKHD1Q8IWZ3 2542 aaKnown RBP9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 PRRG2O14669 202 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 IGFL3Q6UXB1 125 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 HIGD1BQ9P298 99 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 IGKV3D-20A0A0C4DH25 116 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 FABP5P3A8MUU1 101 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 CTSGP08311 255 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 RPL7P18124 248 aaKnown RBP9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 CLUHP3Q96NS8 147 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 KLK15Q9H2R5 256 aa9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 SPANXB1Q9NS25 103 aaPredicted RBP9.74□□□□□ -0.85
CLCNKA-204ENST00000464764 E9PLD3 99 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 CIDEAO60543 219 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 PIP4P1Q86T03 277 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 ZNF479Q96JC4 524 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 SIGMAR1Q99720 223 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 TM2D2Q9BX73 214 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 RAB1BQ9H0U4 201 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 UFC1Q9Y3C8 167 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 IGLV2-18A0A075B6J9 118 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 GAGE12HA6NDE8 117 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 C12orf74Q32Q52 190 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 FOXI2Q6ZQN5 318 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 SPAG8Q99932 426 aaPredicted RBP9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 NXT2Q9NPJ8 142 aaKnown RBP9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 CEP295Q9C0D2 2601 aa9.73□□□□□ -0.85
CLCNKA-204ENST00000464764 ATP5G2Q06055 141 aa9.72□□□□□ -0.85
CLCNKA-204ENST00000464764 C5orf64Q2M2E5 130 aa9.72□□□□□ -0.85
CLCNKA-204ENST00000464764 COX8CQ7Z4L0 72 aa9.72□□□□□ -0.85
CLCNKA-204ENST00000464764 PIFOQ8TCI5 191 aa9.72□□□□□ -0.85
CLCNKA-204ENST00000464764 VSTM5A8MXK1 200 aa9.72□□□□□ -0.85
CLCNKA-204ENST00000464764 HIST1H4GQ99525 98 aa9.72□□□□□ -0.85
CLCNKA-204ENST00000464764 COL6A6A6NMZ7 2263 aa9.72□□□□□ -0.85
CLCNKA-204ENST00000464764 DPM3Q9P2X0 92 aa9.71□□□□□ -0.85
CLCNKA-204ENST00000464764 Q8N8P6 123 aa9.71□□□□□ -0.85
CLCNKA-204ENST00000464764 LINC01560Q8TB33 94 aa9.71□□□□□ -0.85
CLCNKA-204ENST00000464764 CHTOPQ9Y3Y2 248 aaKnown RBP9.71□□□□□ -0.85
CLCNKA-204ENST00000464764 HRNRQ86YZ3 2850 aaPredicted RBP9.71□□□□□ -0.86
CLCNKA-204ENST00000464764 J3KRW8 73 aa9.71□□□□□ -0.86
CLCNKA-204ENST00000464764 CD300EQ496F6 205 aaPredicted RBP9.71□□□□□ -0.86
CLCNKA-204ENST00000464764 CNFNQ9BYD5 112 aa9.71□□□□□ -0.86
CLCNKA-204ENST00000464764 LINC01546A6NGU7 62 aa9.7□□□□□ -0.86
CLCNKA-204ENST00000464764 PRR30Q53SZ7 412 aaPredicted RBP9.7□□□□□ -0.86
CLCNKA-204ENST00000464764 MYOZ3Q8TDC0 251 aa9.7□□□□□ -0.86
CLCNKA-204ENST00000464764 RNF5Q99942 180 aa9.7□□□□□ -0.86
CLCNKA-204ENST00000464764 SRSF8Q9BRL6 282 aaKnown RBP9.7□□□□□ -0.86
CLCNKA-204ENST00000464764 COL12A1Q99715 3063 aa9.7□□□□□ -0.86
CLCNKA-204ENST00000464764 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.7□□□□□ -0.86
CLCNKA-204ENST00000464764 AGPAT4-IT1Q9H0P7 198 aa9.7□□□□□ -0.86
CLCNKA-204ENST00000464764 CEACAM3P40198 252 aa9.69□□□□□ -0.86
CLCNKA-204ENST00000464764 CCDC144NLQ6NUI1 221 aa9.69□□□□□ -0.86
CLCNKA-204ENST00000464764 NRACQ8N912 160 aa9.69□□□□□ -0.86
CLCNKA-204ENST00000464764 ATP5LO75964 103 aa9.69□□□□□ -0.86
CLCNKA-204ENST00000464764 CYSLTR1Q9Y271 337 aa9.69□□□□□ -0.86
CLCNKA-204ENST00000464764 LAGE3Q14657 143 aa9.69□□□□□ -0.86
CLCNKA-204ENST00000464764 NPBQ8NG41 125 aa9.69□□□□□ -0.86
CLCNKA-204ENST00000464764 F8W1H4 67 aa9.68□□□□□ -0.86
CLCNKA-204ENST00000464764 TGFAP01135 160 aa9.68□□□□□ -0.86
CLCNKA-204ENST00000464764 LINC01559Q495D7 138 aa9.68□□□□□ -0.86
CLCNKA-204ENST00000464764 IGF1P05019 195 aa9.68□□□□□ -0.86
CLCNKA-204ENST00000464764 CLEC3BP05452 202 aa9.68□□□□□ -0.86
CLCNKA-204ENST00000464764 GRNP28799 593 aaKnown RBP9.68□□□□□ -0.86
CLCNKA-204ENST00000464764 ZNF672Q499Z4 452 aaPredicted RBP9.68□□□□□ -0.86
CLCNKA-204ENST00000464764 TTC9CQ8N5M4 171 aa9.68□□□□□ -0.86
CLCNKA-204ENST00000464764 CREBBPQ92793 2442 aa9.68□□□□□ -0.86
CLCNKA-204ENST00000464764 A0A087WX48 190 aa9.67□□□□□ -0.86
CLCNKA-204ENST00000464764 GAGE13Q4V321 117 aa9.67□□□□□ -0.86
CLCNKA-204ENST00000464764 VPS13CQ709C8 3753 aa9.67□□□□□ -0.86
CLCNKA-204ENST00000464764 IGHV7-4-1A0A0J9YVY3 117 aa9.67□□□□□ -0.86
CLCNKA-204ENST00000464764 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.67□□□□□ -0.86
CLCNKA-204ENST00000464764 B9A039 149 aa9.67□□□□□ -0.86
CLCNKA-204ENST00000464764 C20orf78Q9BR46 151 aa9.67□□□□□ -0.86
CLCNKA-204ENST00000464764 SMPXQ9UHP9 88 aa9.67□□□□□ -0.86
CLCNKA-204ENST00000464764 PRO0461Q9UI25 63 aa9.67□□□□□ -0.86
CLCNKA-204ENST00000464764 RRN3P1Q2M238 152 aa9.66□□□□□ -0.86
CLCNKA-204ENST00000464764 C15orf32Q32M92 178 aa9.66□□□□□ -0.86
CLCNKA-204ENST00000464764 SPANXN1Q5VSR9 72 aa9.66□□□□□ -0.86
CLCNKA-204ENST00000464764 TRBV7-3A0A075B6L6 115 aa9.66□□□□□ -0.86
CLCNKA-204ENST00000464764 A0A1B0GWB2 263 aa9.66□□□□□ -0.86
CLCNKA-204ENST00000464764 H3BVH4 76 aa9.66□□□□□ -0.86
CLCNKA-204ENST00000464764 BUB3O43684 328 aa9.66□□□□□ -0.86
CLCNKA-204ENST00000464764 DEFB1P60022 68 aa9.66□□□□□ -0.86
CLCNKA-204ENST00000464764 ECSCRQ19T08 205 aa9.66□□□□□ -0.86
CLCNKA-204ENST00000464764 CD3EP07766 207 aa9.65□□□□□ -0.86
CLCNKA-204ENST00000464764 TMEM190Q8WZ59 177 aa9.65□□□□□ -0.86
CLCNKA-204ENST00000464764 ATRXP46100 2492 aa9.65□□□□□ -0.86
CLCNKA-204ENST00000464764 SRSF1Q07955 248 aaKnown RBP eCLIP9.65□□□□□ -0.86
CLCNKA-204ENST00000464764 MORN3Q6PF18 240 aaPredicted RBP9.65□□□□□ -0.86
CLCNKA-204ENST00000464764 OR11H6Q8NGC7 330 aa9.65□□□□□ -0.86
CLCNKA-204ENST00000464764 MSRB2Q9Y3D2 182 aa9.65□□□□□ -0.86
CLCNKA-204ENST00000464764 IGHV7-81A0A0B4J1V7 117 aa9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 LINC01548A6NM66 108 aa9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 PRR9Q5T870 116 aa9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 Q8NA96 180 aa9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 LY6G5BQ8NDX9 201 aa9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 ZNF48Q96MX3 618 aaPredicted RBP9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 TRAV8-2A0A0B4J237 113 aa9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 RAB9AP51151 201 aa9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 SCGB2A2Q13296 93 aa9.64□□□□□ -0.87
CLCNKA-204ENST00000464764 CLEC19AQ6UXS0 136 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms