RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 A0A1W2PNM2 257 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 CCDC179H3BU77 68 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 J3QKU1 62 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 GEMIN2O14893 280 aaKnown RBP2.3□□□□□ -2.04
PTCD3-205ENST00000464541 CCL25O15444 150 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 CTSGP08311 255 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 CATR1Q13166 79 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 ZNF791Q3KP31 576 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-205ENST00000464541 COL5A1-AS1Q5SY13 56 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 Q6ZTI0 123 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 GKN2Q86XP6 184 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 SNX29P2Q8IUI4 249 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 C20orf166-AS1Q96NR2 134 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 NOP16Q9Y3C1 178 aaKnown RBP2.3□□□□□ -2.04
PTCD3-205ENST00000464541 CHCHD2Q9Y6H1 151 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-205ENST00000464541 SERP1Q9Y6X1 66 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 ZNF609O15014 1411 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 PTPRSQ13332 1948 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 POLEQ07864 2286 aa2.3□□□□□ -2.04
PTCD3-205ENST00000464541 LCTP09848 1927 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 MAPKBP1O60336 1514 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 A2ML1A8K2U0 1454 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 LOC107984156A0A0G2JMH3 177 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 TCRBV4S1A1TA0A5B7 111 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 J3QLW9 94 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 EDF1O60869 148 aaKnown RBP2.29□□□□□ -2.04
PTCD3-205ENST00000464541 ERC2-IT1O76042 136 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 IGLV1-51P01701 117 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 IFITM1P13164 125 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 RPL26P61254 145 aaKnown RBP2.29□□□□□ -2.04
PTCD3-205ENST00000464541 C1orf134Q5TEV5 83 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 CASC2Q6XLA1 102 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 ARL17AQ8IVW1 177 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 OTOGLQ3ZCN5 2332 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 GREB1Q4ZG55 1949 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 ANAPC1Q9H1A4 1944 aa2.29□□□□□ -2.04
PTCD3-205ENST00000464541 FRMPD1Q5SYB0 1578 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 CFTRP13569 1480 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 A0A087WSZ3 146 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 MCRIP1C9JLW8 97 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 PIPP12273 146 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-205ENST00000464541 SSR2P43308 183 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 NCMAPQ5T1S8 102 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 C9orf153Q5TBE3 101 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 OR2T2Q6IF00 324 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 Q8N2B8 174 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 VSTM2AQ8TAG5 236 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 SFT2D1Q8WV19 159 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 C4orf3Q8WVX3 66 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 Q9H521 79 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 LHFPL6Q9Y693 200 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 MYH7P12883 1935 aa2.28□□□□□ -2.04
PTCD3-205ENST00000464541 PHLPP1O60346 1717 aa2.28□□□□□ -2.05
PTCD3-205ENST00000464541 TRAV2A0A0B4J234 112 aa2.27□□□□□ -2.05
PTCD3-205ENST00000464541 TRAV10A0A0B4J240 114 aa2.27□□□□□ -2.05
PTCD3-205ENST00000464541 IBA57-AS1B1ANH7 110 aa2.27□□□□□ -2.05
PTCD3-205ENST00000464541 SNCGO76070 127 aa2.27□□□□□ -2.05
PTCD3-205ENST00000464541 SPINK8P0C7L1 97 aa2.27□□□□□ -2.05
PTCD3-205ENST00000464541 S100A10P60903 97 aa2.27□□□□□ -2.05
PTCD3-205ENST00000464541 MIC13Q5XKP0 118 aa2.27□□□□□ -2.05
PTCD3-205ENST00000464541 C12orf73Q69YU5 71 aa2.27□□□□□ -2.05
PTCD3-205ENST00000464541 SPTSSAQ969W0 71 aa2.27□□□□□ -2.05
PTCD3-205ENST00000464541 AQP10Q96PS8 301 aa2.27□□□□□ -2.05
PTCD3-205ENST00000464541 RB1CC1Q8TDY2 1594 aa2.27□□□□□ -2.05
PTCD3-205ENST00000464541 PZPP20742 1482 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 CECR2Q9BXF3 1484 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 SBF1O95248 1867 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 TRAV12-1A0A0B4J245 112 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 FAM24AA6NFZ4 105 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 NDUFB6O95139 128 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 IL5P05113 134 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 CXCL8P10145 99 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 ELOBQ15370 118 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 Q6AWC8 147 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 TTC9CQ8N5M4 171 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 LINC00526Q96FQ7 95 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 PRO2289Q9P1D8 64 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 AP4S1Q9Y587 144 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 CCDC88AQ3V6T2 1871 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 FOCADQ5VW36 1801 aa2.26□□□□□ -2.05
PTCD3-205ENST00000464541 HEATR5AQ86XA9 2040 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 MYO5AQ9Y4I1 1855 aaKnown RBP2.25□□□□□ -2.05
PTCD3-205ENST00000464541 TCRBV3S1A0A5B6 114 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 SDHAF1A6NFY7 115 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 A6NN06 94 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 B4DSR2 109 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 C5orf67F2Z3F1 127 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 NPC2P61916 151 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 SLC25A26Q70HW3 274 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 LINC00269Q8N2A0 174 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 TMEM242Q9NWH2 141 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 CCL26Q9Y258 94 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 SCN9AQ15858 1988 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 NSD3Q9BZ95 1437 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 MALRD1Q5VYJ5 2156 aa2.25□□□□□ -2.05
PTCD3-205ENST00000464541 SLX4Q8IY92 1834 aa2.24□□□□□ -2.05
PTCD3-205ENST00000464541 TRPM6Q9BX84 2022 aa2.24□□□□□ -2.05
PTCD3-205ENST00000464541 A0A1W2PRS3 328 aa2.24□□□□□ -2.05
PTCD3-205ENST00000464541 A6NIN4 97 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms