RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 TPST1O60507 370 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 OR2H2O95918 312 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 RBP4P02753 201 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 NBEAP1P0C6P0 100 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 HIST1H1BP16401 226 aaKnown RBP0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 SPINT3P49223 89 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 SRP9P49458 86 aaKnown RBP0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 POLR2JP52435 117 aaKnown RBP0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 DNAJB13P59910 316 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 HIST1H1AQ02539 215 aaPredicted RBP0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 LYPD5Q6UWN5 251 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 TOMM20LQ6UXN7 152 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 Q6ZQY7 126 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 SNX29P2Q8IUI4 249 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 Q8N6K4 173 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 TCTEX1D1Q8N7M0 179 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 OR5A2Q8NGI9 324 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 CCL19Q99731 98 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 FAM107BQ9H098 131 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 LPAR5Q9H1C0 372 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 C19orf12Q9NSK7 152 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 HSPB8Q9UJY1 196 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 STRCQ7RTU9 1775 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 POLEQ07864 2286 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 OVOS2A0A0G2JMS6 1433 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 FGD6Q6ZV73 1430 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 TRAPPC8Q9Y2L5 1435 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 EML5Q05BV3 1969 aa0.36□□□□□ -2.35
NDUFA4-202ENST00000463308 DENND4CQ5VZ89 1909 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 NAV2Q8IVL1 2488 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 BORCS7-ASMTA0A0B4J1R7 106 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 A0A0G2JMM0 328 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 CCKP06307 115 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 DBIP07108 87 aaKnown RBP0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 COX4I1P13073 169 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 NCS1P62166 190 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 SMCO1Q147U7 214 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 RHOHQ15669 191 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 C6orf52Q5T4I8 152 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 LINC00299Q6ZSB3 139 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 SBSPONQ8IVN8 264 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 CTAGE3PQ8IX95 158 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 CCL4L1Q8NHW4 92 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 LINC00208Q96KT6 92 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 SLC35B3Q9H1N7 401 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 ATG5Q9H1Y0 275 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 TPT1P8Q9HAU6 139 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 JPT1Q9UK76 154 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 NOP16Q9Y3C1 178 aaKnown RBP0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 MPC1Q9Y5U8 109 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 ZFC3H1O60293 1989 aaKnown RBP0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 TNRC6AQ8NDV7 1962 aaKnown RBP0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 SBF1O95248 1867 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 BRWD1Q9NSI6 2320 aa0.35□□□□□ -2.35
NDUFA4-202ENST00000463308 PTPRFP10586 1907 aa0.34□□□□□ -2.35
NDUFA4-202ENST00000463308 ARHGEF10O15013 1369 aa0.34□□□□□ -2.35
NDUFA4-202ENST00000463308 E9PCH4 1651 aa0.34□□□□□ -2.35
NDUFA4-202ENST00000463308 TNRC6BQ9UPQ9 1833 aaKnown RBP0.34□□□□□ -2.35
NDUFA4-202ENST00000463308 SNRNP200O75643 2136 aaKnown RBP0.34□□□□□ -2.35
NDUFA4-202ENST00000463308 TRBV7-6A0A0J9YX20 115 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 PNMA8CA0A1B0GUJ8 204 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 LOC105371267A0A1B0GV96 52 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 A6NIN4 97 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 IFITM5A6NNB3 132 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 HIGD1CA8MV81 97 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 LY6G6CO95867 125 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 IGHV3-33P01772 117 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 APOC1P02654 83 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 CD3DP04234 171 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 GYPBP06028 91 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 IGLC6P0CF74 106 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 HLA-DRB4P13762 266 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 ADCYAP1P18509 176 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 PDE6GP18545 87 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 AKR1D1P51857 326 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 CAV3P56539 151 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 RRAS2P62070 204 aaPredicted RBP0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 RPS28P62857 69 aaKnown RBP0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 CHD3Q12873 2000 aaKnown RBP0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 FAM135BQ49AJ0 1406 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 S100A7L2Q5SY68 101 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 RPL7L1Q6DKI1 246 aaKnown RBP0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 SLC25A26Q70HW3 274 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 MMGT1Q8N4V1 131 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 NUP210Q8TEM1 1887 aaPredicted RBP0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 NAT14Q8WUY8 206 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 PFDN5Q99471 154 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 PSMG3Q9BT73 122 aaPredicted RBP0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 COPZ2Q9P299 210 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 DNAJC15Q9Y5T4 150 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 HLA-DRB4X5D2U9 266 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 CCDC171Q6TFL3 1326 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 TANC2Q9HCD6 1990 aa0.34□□□□□ -2.36
NDUFA4-202ENST00000463308 COL4A5P29400 1685 aa0.33□□□□□ -2.36
NDUFA4-202ENST00000463308 MED23Q9ULK4 1368 aa0.33□□□□□ -2.36
NDUFA4-202ENST00000463308 COL24A1Q17RW2 1714 aa0.33□□□□□ -2.36
NDUFA4-202ENST00000463308 SYNJ1O43426 1573 aa0.33□□□□□ -2.36
NDUFA4-202ENST00000463308 KIAA1107Q9UPP5 1409 aa0.33□□□□□ -2.36
NDUFA4-202ENST00000463308 A0A0J9YY99 117 aa0.33□□□□□ -2.36
NDUFA4-202ENST00000463308 FAM236AA0A1B0GUQ0 79 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms