RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 DLX4Q92988 240 aaPredicted RBP3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 TMEM18Q96B42 140 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 C2CD3Q4AC94 2353 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 TACC2O95359 2948 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 MUC21A0A0G2JKD1 596 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 MUC21A0A140T8X8 626 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 PCP4L1A6NKN8 68 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 OR11H12B2RN74 326 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 F6UB75 175 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 CRLF1O75462 422 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 IGLV2-8P01709 118 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 NTF3P20783 257 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 SRIP30626 198 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 RASL11AQ6T310 242 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 C18orf65Q6ZTR6 163 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 STHQ8IWL8 128 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 RNF152Q8N8N0 203 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 KCNS1Q96KK3 526 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 SPAG8Q99932 426 aaPredicted RBP3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 GNB1LQ9BYB4 327 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 GPR61Q9BZJ8 451 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 GFRA4Q9GZZ7 299 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 ITPR2Q14571 2701 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 GCN1Q92616 2671 aaKnown RBP3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 SMIM27A0A1W2PRY6 76 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 F2Z2F3 143 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 KLF5Q13887 457 aaPredicted RBP3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 RNASEKQ6P5S7 137 aaKnown RBP3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 FA2HQ7L5A8 372 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 TMEM61Q8N0U2 210 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 PYGO2Q9BRQ0 406 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 MLST8Q9BVC4 326 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 C16orf95Q9H693 158 aa3.13□□□□□ -1.91
ATP13A3-206ENST00000461660 APCP25054 2843 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 UTP20O75691 2785 aaKnown RBP3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 CR1P17927 2039 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 M0R381 172 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST1H2BKO60814 126 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST1H2BJP06899 126 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 PMCHP20382 165 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST1H2BOP23527 126 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST1H2BBP33778 126 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST1H2BDP58876 126 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST1H2BCP62807 126 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST2H2BEQ16778 126 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 FOXI2Q6ZQN5 318 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 C9orf47Q6ZRZ4 202 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 SYT8Q8NBV8 401 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST1H2BHQ93079 126 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST1H2BNQ99877 126 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST1H2BMQ99879 126 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 TRAV8-2A0A0B4J237 113 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 TRAV12-3A0A0B4J271 114 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 TRAV25A0A0B4J276 109 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 F5H697 171 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 H3BVH4 76 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 K7EQG2 157 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 CSN3P07498 182 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 CD7P09564 240 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 FABP4P15090 132 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 AMTP48728 403 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 SRSF2Q01130 221 aaKnown RBP3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 LYZL1Q6UWQ5 148 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 NDUFA11Q86Y39 141 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 C3orf56Q8N813 242 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 PRSS3P2Q8NHM4 247 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 MYOZ3Q8TDC0 251 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 SORL1Q92673 2214 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
ATP13A3-206ENST00000461660 IGHV3OR16-12A0A075B7B8 117 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 C19orf71A6NCJ1 209 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 KNCNA6PVL3 124 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 NPIPB6E9PJ23 425 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 IGLV2-11P01706 119 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 MGPP08493 103 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 ARMS2P0C7Q2 107 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 CKS2P33552 79 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 FOXA3P55318 350 aaPredicted RBP3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 DEFB1P60022 68 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 CACNG7P62955 275 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 S100A12P80511 92 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 SPINK13Q1W4C9 94 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 CD300EQ496F6 205 aaPredicted RBP3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 HIST2H2BDQ6DRA6 164 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 OR10D4PQ8NGN7 298 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 SSBP4Q9BWG4 385 aaPredicted RBP3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 DCHS2Q6V1P9 2916 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 TRGV11A0A075B6L2 103 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 C7orf71A4D174 169 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 CBY3A6NI87 242 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 CDKN1BP46527 198 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 GTSCR1Q86UQ5 136 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 C20orf173Q96LM9 149 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 TRBV7-9A0A0J9YWB2 115 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 M0R2Z0 102 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 AMBPP02760 352 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 PROK1P58294 105 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 FXYD7P58549 80 aa3.11□□□□□ -1.91
ATP13A3-206ENST00000461660 DEFB114Q30KQ6 69 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms