RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 FMC1Q96HJ9 113 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 RCHY1Q96PM5 261 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 C20orf144Q9BQM9 153 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 C2orf88Q9BSF0 95 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 SHANK2-AS3Q9BTD1 123 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 CHRDL1Q9BU40 450 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 SLC25A39Q9BZJ4 359 aaPredicted RBP2.91□□□□□ -1.94
CFHR3-204ENST00000461558 Q9H3A6 140 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 OTORQ9NRC9 128 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 CBLN4Q9NTU7 201 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 ZNF586Q9NXT0 402 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 DPM3Q9P2X0 92 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 ONECUT1Q9UBC0 465 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 ZMAT5Q9UDW3 170 aaKnown RBP2.91□□□□□ -1.94
CFHR3-204ENST00000461558 NAT8BQ9UHF3 227 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 HIGD1AQ9Y241 93 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 LRBAP50851 2863 aa2.91□□□□□ -1.94
CFHR3-204ENST00000461558 DMXL2Q8TDJ6 3036 aa2.9□□□□□ -1.94
CFHR3-204ENST00000461558 ZZEF1O43149 2961 aa2.9□□□□□ -1.94
CFHR3-204ENST00000461558 ACACAQ13085 2346 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 PTPRQQ9UMZ3 2332 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 IGLV11-55A0A075B6I3 123 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 IGLV4-3A0A075B6K6 122 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 TRBV19A0A075B6N1 114 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 OOSP1A8MZH6 123 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 H3BTX0 84 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 NBR2O15453 112 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 ZNF324O75467 553 aaPredicted RBP2.9□□□□□ -1.95
CFHR3-204ENST00000461558 APCSP02743 223 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 IGLC2P0DOY2 106 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 SRIP30626 198 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 BRS3P32247 399 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 CEACAM3P40198 252 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 CTRLP40313 264 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 UBE2G1P62253 170 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 ARF6P62330 175 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 RPL19P84098 196 aaKnown RBP2.9□□□□□ -1.95
CFHR3-204ENST00000461558 KLF5Q13887 457 aaPredicted RBP2.9□□□□□ -1.95
CFHR3-204ENST00000461558 MMDQ15546 238 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 USF2Q15853 346 aaPredicted RBP2.9□□□□□ -1.95
CFHR3-204ENST00000461558 C5orf64Q2M2E5 130 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 KLK9Q2XQG4 91 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 TDRG1Q3Y452 100 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 ATP5L2Q7Z4Y8 100 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 Q86TA4 180 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 BAGE3Q86Y29 109 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 LINC00469Q8N7U9 141 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 ZNF491Q8N8L2 437 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 C18orf32Q8TCD1 76 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 BLNKQ8WV28 456 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 GTSF1Q8WW33 167 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 KCNS1Q96KK3 526 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 GPR82Q96P67 336 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 TBX15Q96SF7 602 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 HSPB9Q9BQS6 159 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 RAB1BQ9H0U4 201 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 SIRPDQ9H106 197 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 RPP21Q9H633 154 aaKnown RBP2.9□□□□□ -1.95
CFHR3-204ENST00000461558 ZNF331Q9NQX6 463 aaPredicted RBP2.9□□□□□ -1.95
CFHR3-204ENST00000461558 KLK9Q9UKQ9 250 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 HILPDAQ9Y5L2 63 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 PKDREJQ9NTG1 2253 aa2.9□□□□□ -1.95
CFHR3-204ENST00000461558 TRAV30A0A087WSZ9 112 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 A0A1B0GV90 55 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 FAM231BA6NCW3 169 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 HIGD1CA8MV81 97 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 ZNF705FA8MVS1 300 aaPredicted RBP2.89□□□□□ -1.95
CFHR3-204ENST00000461558 A8MWL6 223 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 ZNF253O75346 499 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 CNIH1O95406 144 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 HLA-DRB1P01911 266 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 ROS1P08922 2347 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 C3orf79P0CE67 100 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 ZNF705DP0CH99 300 aaPredicted RBP2.89□□□□□ -1.95
CFHR3-204ENST00000461558 ZNF705BP0CI00 300 aaPredicted RBP2.89□□□□□ -1.95
CFHR3-204ENST00000461558 RAB4AP20338 218 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 CD24P25063 80 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 GPR6P46095 362 aaPredicted RBP2.89□□□□□ -1.95
CFHR3-204ENST00000461558 FOXA3P55318 350 aaPredicted RBP2.89□□□□□ -1.95
CFHR3-204ENST00000461558 PLGLAQ15195 96 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 FAM120AOSQ5T036 256 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 MINOS1Q5TGZ0 78 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 ZNF562Q6V9R5 426 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 TCF24Q7RTU0 167 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 VMO1Q7Z5L0 202 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 LYPD1Q8N2G4 141 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 EXOC3-AS1Q8N2X6 119 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 TTC9CQ8N5M4 171 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 SIGLECL1Q8N7X8 197 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 TMEM75Q8N9X5 138 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 GATD1Q8NB37 220 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 OR4B1Q8NGF8 309 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 VN1R17PQ8TDU5 208 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 MRPL53Q96EL3 112 aaKnown RBP2.89□□□□□ -1.95
CFHR3-204ENST00000461558 TIMD4Q96H15 378 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 RBM14Q96PK6 669 aaKnown RBP2.89□□□□□ -1.95
CFHR3-204ENST00000461558 RASL11BQ9BPW5 248 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 SPXQ9BT56 116 aa2.89□□□□□ -1.95
CFHR3-204ENST00000461558 FAM103A1Q9BTL3 118 aaKnown RBP2.89□□□□□ -1.95
CFHR3-204ENST00000461558 SNHG12Q9BXW3 62 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms