RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-209	ENST00000460731	DEFA6	Q01524	100 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	CLLU1	Q5K131	121 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	EBLN2	Q6P2I7	272 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	MORN3	Q6PF18	240 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	C2CD4C	Q8TF44	421 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	LINC00052	Q96N35	136 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	VGLL1	Q99990	258 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	B9D2	Q9BPU9	175 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	TM2D3	Q9BRN9	247 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	ATG101	Q9BSB4	218 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	CSTL1	Q9H114	145 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	WFDC10A	Q9H1F0	79 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	SMDT1	Q9H4I9	107 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	SRD5A3	Q9H8P0	318 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	MANBAL	Q9NQG1	85 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	MED9	Q9NWA0	146 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	ZNF492	Q9P255	531 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	UBQLN2	Q9UHD9	624 aa		4.1	□□□□□ -1.75
PTPN12-209	ENST00000460731	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	AMBP	P02760	352 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	PRB2	P02812	416 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	S100A9	P06702	114 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	BCL2	P10415	239 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	CSN1S1	P47710	185 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	HAGH	Q16775	308 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	ZNF506	Q5JVG8	444 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	ACTL10	Q5JWF8	245 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	STH	Q8IWL8	128 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	ZFAND2A	Q8N6M9	145 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	TMEM75	Q8N9X5	138 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	ZNF738	Q8NE65	137 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	OR10J6P	Q8NGY7	276 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	TVP23C	Q96ET8	276 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	FAM210A	Q96ND0	272 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	C20orf144	Q9BQM9	153 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	VAX2	Q9UIW0	290 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	TP53TG1	Q9Y2A0	90 aa		4.09	□□□□□ -1.75
PTPN12-209	ENST00000460731	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	TRGV11	A0A075B6L2	103 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	LOC102723971	A0A1B0GUV8	181 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	RBFOX3	A6NFN3	312 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	C11orf94	C9JXX5	98 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731		F6UZH7	168 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	TMEM250	H0YL14	139 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	PEX7	O00628	323 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	PDE6D	O43924	150 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	ZNF324	O75467	553 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	NHLRC4	P0CG21	123 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	ZNF705D	P0CH99	300 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	ZNF705B	P0CI00	300 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	ATP5G3	P48201	142 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	ZNF138	P52744	262 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	APOC4	P55056	127 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	NUTF2	P61970	127 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	MEF2B	Q02080	365 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	TMEM183B	Q1AE95	376 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	KRTAP5-1	Q6L8H4	278 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	SBSPON	Q8IVN8	264 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	EIF4E3	Q8N5X7	224 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	CYB561D1	Q8N8Q1	229 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	CMTM2	Q8TAZ6	248 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	RNF183	Q96D59	192 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	IGF2BP2-AS1	Q96M15	143 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	RARRES2	Q99969	163 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	LINC00467	Q9BRT7	94 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	TUBA4B	Q9H853	241 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	GNG13	Q9P2W3	67 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	TP53TG3	Q9ULZ0	132 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	ZFP30	Q9Y2G7	519 aa		4.08	□□□□□ -1.76
PTPN12-209	ENST00000460731	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	RAB19	A4D1S5	217 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	LINC00862	A6NCI5	91 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	LTA	P01374	205 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	IFNA1	P01562	189 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	IGKV2D-40	P01614	121 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	TSPO	P30536	169 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	CDKN1B	P46527	198 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	TAS2R60	P59551	318 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	UBE2G2	P60604	165 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	GNG5	P63218	68 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	HIST1H1A	Q02539	215 aa	Predicted RBP	4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	ERCC8	Q13216	396 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	TDRG1	Q3Y452	100 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	SAPCD1	Q5SSQ6	148 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	CST9LP1	Q5W188	147 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731		Q6AWC8	147 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	GOLT1A	Q6ZVE7	132 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	C1orf158	Q8N1D5	194 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	MRAP	Q8TCY5	172 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	SMIM12	Q96EX1	92 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	FMC1	Q96HJ9	113 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	LINC00479	Q96M42	142 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	OVOL2	Q9BRP0	275 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	C1QTNF4	Q9BXJ3	329 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	SLC35B3	Q9H1N7	401 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	PSG8	Q9UQ74	426 aa		4.07	□□□□□ -1.76
PTPN12-209	ENST00000460731	TRBV20OR9-2	A0A075B6H5	130 aa		4.06	□□□□□ -1.76
PTPN12-209	ENST00000460731	TRAV8-1	A0A0A6YYK1	113 aa		4.06	□□□□□ -1.76
PTPN12-209	ENST00000460731	SMIM9	A6NGZ8	99 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 93 ms