RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 GTSF1Q8WW33 167 aa13.06□□□□□ -0.32
CDK11A-209ENST00000460465 GZMBP10144 247 aa13.06□□□□□ -0.32
CDK11A-209ENST00000460465 PROK1P58294 105 aa13.06□□□□□ -0.32
CDK11A-209ENST00000460465 OR10J6PQ8NGY7 276 aa13.06□□□□□ -0.32
CDK11A-209ENST00000460465 GFRA4Q9GZZ7 299 aa13.06□□□□□ -0.32
CDK11A-209ENST00000460465 F6UB75 175 aa13.05□□□□□ -0.32
CDK11A-209ENST00000460465 CRLF1O75462 422 aa13.05□□□□□ -0.32
CDK11A-209ENST00000460465 K7EQG2 157 aa13.04□□□□□ -0.32
CDK11A-209ENST00000460465 FHL3Q13643 280 aa13.04□□□□□ -0.32
CDK11A-209ENST00000460465 SNURFLB1AK76 121 aa13.04□□□□□ -0.32
CDK11A-209ENST00000460465 CCL24O00175 119 aa13.04□□□□□ -0.32
CDK11A-209ENST00000460465 HIST1H1AQ02539 215 aaPredicted RBP13.04□□□□□ -0.32
CDK11A-209ENST00000460465 OR8A1Q8NGG7 326 aa13.04□□□□□ -0.32
CDK11A-209ENST00000460465 PGLYRP4Q96LB8 373 aa13.04□□□□□ -0.32
CDK11A-209ENST00000460465 FAM231BA6NCW3 169 aa13.03□□□□□ -0.32
CDK11A-209ENST00000460465 CSN3P07498 182 aa13.03□□□□□ -0.32
CDK11A-209ENST00000460465 LINC00477Q96M19 166 aa13.03□□□□□ -0.32
CDK11A-209ENST00000460465 HIVEP1P15822 2718 aa13.03□□□□□ -0.32
CDK11A-209ENST00000460465 TMEM189A5PLL7 270 aa13.02□□□□□ -0.32
CDK11A-209ENST00000460465 ZNF688P0C7X2 276 aa13.02□□□□□ -0.32
CDK11A-209ENST00000460465 NDUFA6P56556 154 aa13.02□□□□□ -0.32
CDK11A-209ENST00000460465 RBPMS2Q6ZRY4 209 aaKnown RBP13.02□□□□□ -0.32
CDK11A-209ENST00000460465 GNB1LQ9BYB4 327 aa13.02□□□□□ -0.32
CDK11A-209ENST00000460465 MRPL18Q9H0U6 180 aaKnown RBP13.02□□□□□ -0.32
CDK11A-209ENST00000460465 WDR73Q6P4I2 378 aa13.02□□□□□ -0.33
CDK11A-209ENST00000460465 TMEM136Q6ZRR5 245 aa13.02□□□□□ -0.33
CDK11A-209ENST00000460465 TMSB15BA0A087X1C1 80 aa13.01□□□□□ -0.33
CDK11A-209ENST00000460465 FABP5P3A8MUU1 101 aa13.01□□□□□ -0.33
CDK11A-209ENST00000460465 COX19Q49B96 90 aa13.01□□□□□ -0.33
CDK11A-209ENST00000460465 PSMG4Q5JS54 123 aa13.01□□□□□ -0.33
CDK11A-209ENST00000460465 LENEPQ9Y5L5 61 aa13.01□□□□□ -0.33
CDK11A-209ENST00000460465 RAB4BP61018 213 aa13.01□□□□□ -0.33
CDK11A-209ENST00000460465 SNRPD3P62318 126 aaKnown RBP13.01□□□□□ -0.33
CDK11A-209ENST00000460465 FOXA3P55318 350 aaPredicted RBP13□□□□□ -0.33
CDK11A-209ENST00000460465 PAFAH1B2P68402 229 aa13□□□□□ -0.33
CDK11A-209ENST00000460465 RASL11AQ6T310 242 aa13□□□□□ -0.33
CDK11A-209ENST00000460465 ATP5L2Q7Z4Y8 100 aa13□□□□□ -0.33
CDK11A-209ENST00000460465 DYNLRB2Q8TF09 96 aa13□□□□□ -0.33
CDK11A-209ENST00000460465 FN1P02751 2386 aaKnown RBP12.99□□□□□ -0.33
CDK11A-209ENST00000460465 A0A1B0GXF2 115 aa12.99□□□□□ -0.33
CDK11A-209ENST00000460465 ADARB2-AS1A8MUL3 147 aa12.99□□□□□ -0.33
CDK11A-209ENST00000460465 MT-ND6P03923 174 aa12.99□□□□□ -0.33
CDK11A-209ENST00000460465 PRR9Q5T870 116 aa12.99□□□□□ -0.33
CDK11A-209ENST00000460465 NSD1Q96L73 2696 aaPredicted RBP12.99□□□□□ -0.33
CDK11A-209ENST00000460465 XKRY2A2RUG3 117 aa12.99□□□□□ -0.33
CDK11A-209ENST00000460465 ORM1P02763 201 aa12.99□□□□□ -0.33
CDK11A-209ENST00000460465 KRTAP10-3P60369 221 aa12.99□□□□□ -0.33
CDK11A-209ENST00000460465 MAJINQ3KP22 176 aa12.99□□□□□ -0.33
CDK11A-209ENST00000460465 GDF5OSQ5U4N7 250 aa12.99□□□□□ -0.33
CDK11A-209ENST00000460465 FAM19A4Q96LR4 140 aa12.99□□□□□ -0.33
CDK11A-209ENST00000460465 J3KRW8 73 aa12.98□□□□□ -0.33
CDK11A-209ENST00000460465 HLA-DQA1P01909 254 aa12.98□□□□□ -0.33
CDK11A-209ENST00000460465 CAMPP49913 170 aa12.98□□□□□ -0.33
CDK11A-209ENST00000460465 NSUN5P1Q3KNT7 163 aa12.98□□□□□ -0.33
CDK11A-209ENST00000460465 TMEM61Q8N0U2 210 aa12.98□□□□□ -0.33
CDK11A-209ENST00000460465 ZFAND2AQ8N6M9 145 aa12.98□□□□□ -0.33
CDK11A-209ENST00000460465 RPS20P60866 119 aaKnown RBP12.97□□□□□ -0.33
CDK11A-209ENST00000460465 HBBP68871 147 aa12.97□□□□□ -0.33
CDK11A-209ENST00000460465 DEFB114Q30KQ6 69 aa12.97□□□□□ -0.33
CDK11A-209ENST00000460465 TPPP3Q9BW30 176 aa12.97□□□□□ -0.33
CDK11A-209ENST00000460465 CD33P20138 364 aa12.97□□□□□ -0.33
CDK11A-209ENST00000460465 LINC01559Q495D7 138 aa12.97□□□□□ -0.33
CDK11A-209ENST00000460465 Q6AWC8 147 aa12.97□□□□□ -0.33
CDK11A-209ENST00000460465 Q6ZQT7 251 aa12.96□□□□□ -0.33
CDK11A-209ENST00000460465 ZNF575Q86XF7 245 aa12.96□□□□□ -0.33
CDK11A-209ENST00000460465 C11orf21Q9P2W6 132 aa12.96□□□□□ -0.33
CDK11A-209ENST00000460465 ARMS2P0C7Q2 107 aa12.96□□□□□ -0.34
CDK11A-209ENST00000460465 A0A0J9YX75 114 aa12.95□□□□□ -0.34
CDK11A-209ENST00000460465 HOXA5P20719 270 aa12.95□□□□□ -0.34
CDK11A-209ENST00000460465 CD300EQ496F6 205 aaPredicted RBP12.95□□□□□ -0.34
CDK11A-209ENST00000460465 TRAV2A0A0B4J234 112 aa12.95□□□□□ -0.34
CDK11A-209ENST00000460465 IGKV3D-20A0A0C4DH25 116 aa12.95□□□□□ -0.34
CDK11A-209ENST00000460465 TRBV7-9A0A0J9YWB2 115 aa12.95□□□□□ -0.34
CDK11A-209ENST00000460465 A0A1B0GUT8 65 aa12.95□□□□□ -0.34
CDK11A-209ENST00000460465 SLAQ13239 276 aa12.95□□□□□ -0.34
CDK11A-209ENST00000460465 KIAA1644Q3SXP7 199 aa12.95□□□□□ -0.34
CDK11A-209ENST00000460465 LYZL1Q6UWQ5 148 aa12.95□□□□□ -0.34
CDK11A-209ENST00000460465 SSBP4Q9BWG4 385 aaPredicted RBP12.95□□□□□ -0.34
CDK11A-209ENST00000460465 SETXQ7Z333 2677 aaKnown RBP12.95□□□□□ -0.34
CDK11A-209ENST00000460465 GRIFINA4D1Z8 144 aa12.94□□□□□ -0.34
CDK11A-209ENST00000460465 APCSP02743 223 aa12.94□□□□□ -0.34
CDK11A-209ENST00000460465 GPX1P07203 203 aa12.94□□□□□ -0.34
CDK11A-209ENST00000460465 CRISP2P16562 243 aa12.94□□□□□ -0.34
CDK11A-209ENST00000460465 EBLN2Q6P2I7 272 aa12.94□□□□□ -0.34
CDK11A-209ENST00000460465 KIR3DS1Q14943 382 aa12.94□□□□□ -0.34
CDK11A-209ENST00000460465 PRR31Q5SQ13 230 aa12.94□□□□□ -0.34
CDK11A-209ENST00000460465 GFI1BQ5VTD9 330 aa12.94□□□□□ -0.34
CDK11A-209ENST00000460465 NDUFA11Q86Y39 141 aa12.94□□□□□ -0.34
CDK11A-209ENST00000460465 APRG1Q8IVJ8 170 aa12.94□□□□□ -0.34
CDK11A-209ENST00000460465 FER1L6-AS1Q8NA97 138 aa12.94□□□□□ -0.34
CDK11A-209ENST00000460465 IGLC6P0CF74 106 aa12.93□□□□□ -0.34
CDK11A-209ENST00000460465 RIGQ13278 110 aa12.93□□□□□ -0.34
CDK11A-209ENST00000460465 BORCS7Q96B45 105 aa12.93□□□□□ -0.34
CDK11A-209ENST00000460465 IFITM10A6NMD0 228 aa12.93□□□□□ -0.34
CDK11A-209ENST00000460465 RNASE4P34096 147 aaKnown RBP12.93□□□□□ -0.34
CDK11A-209ENST00000460465 C21orf62-AS1Q17RA5 79 aa12.93□□□□□ -0.34
CDK11A-209ENST00000460465 SIGLEC8Q9NYZ4 499 aa12.93□□□□□ -0.34
CDK11A-209ENST00000460465 TRAV21A0A0B4J279 112 aa12.92□□□□□ -0.34
CDK11A-209ENST00000460465 A0A1B0GUS0 222 aa12.92□□□□□ -0.34
CDK11A-209ENST00000460465 CTRLP40313 264 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms