RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 A8MWL6 223 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 SCRT1Q9BWW7 348 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 NOP10Q9NPE3 64 aaKnown RBP7.56□□□□□ -1.2
EPB41-208ENST00000460378 ZNF580Q9UK33 172 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 PMS2P5A8MQ11 134 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 LEPROTL1O95214 131 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 TRBV12-3P01733 135 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 HLA-DQA1P01909 254 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 PFN1P07737 140 aaKnown RBP7.56□□□□□ -1.2
EPB41-208ENST00000460378 PLP1P60201 277 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 SAMD5Q5TGI4 173 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 DMRTA1Q5VZB9 504 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 WFDC9Q8NEX5 89 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 OTORQ9NRC9 128 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 ZFP30Q9Y2G7 519 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 SORL1Q92673 2214 aa7.56□□□□□ -1.2
EPB41-208ENST00000460378 RPP25LQ8N5L8 163 aaKnown RBP7.55□□□□□ -1.2
EPB41-208ENST00000460378 NFE4Q86UQ8 179 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 Q8N6K4 173 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 CENPEQ02224 2701 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 M0R381 172 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 ARL14EPLP0DKL9 152 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 TAS2R60P59551 318 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 SPXQ9BT56 116 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 PRUNE2Q8WUY3 3088 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 CRYBB3P26998 211 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 ZNF506Q5JVG8 444 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 SGK494Q96LW2 274 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 C7orf71A4D174 169 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 GGTLC3B5MD39 225 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 HOXA5P20719 270 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 SLC25A34Q6PIV7 304 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 SMIM12Q96EX1 92 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 SHANK2-AS3Q9BTD1 123 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 Q9H3A6 140 aa7.55□□□□□ -1.2
EPB41-208ENST00000460378 DSPP15924 2871 aaKnown RBP7.54□□□□□ -1.2
EPB41-208ENST00000460378 TRAV2A0A0B4J234 112 aa7.54□□□□□ -1.2
EPB41-208ENST00000460378 C10orf126Q8N4M7 172 aa7.54□□□□□ -1.2
EPB41-208ENST00000460378 PYGO2Q9BRQ0 406 aa7.54□□□□□ -1.2
EPB41-208ENST00000460378 SRP19P09132 144 aaKnown RBP7.54□□□□□ -1.2
EPB41-208ENST00000460378 MYOZ3Q8TDC0 251 aa7.54□□□□□ -1.2
EPB41-208ENST00000460378 C1orf147Q96MC9 270 aaPredicted RBP7.54□□□□□ -1.2
EPB41-208ENST00000460378 FABP5P3A8MUU1 101 aa7.54□□□□□ -1.2
EPB41-208ENST00000460378 LYRM9A8MSI8 78 aa7.54□□□□□ -1.2
EPB41-208ENST00000460378 FABP2P12104 132 aa7.54□□□□□ -1.2
EPB41-208ENST00000460378 MALP21145 153 aa7.54□□□□□ -1.2
EPB41-208ENST00000460378 SFRP2Q96HF1 295 aa7.54□□□□□ -1.2
EPB41-208ENST00000460378 GCSHP23434 173 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 C14orf144Q96I85 54 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 IGLV2-18A0A075B6J9 118 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 PGLYRP4Q96LB8 373 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 TNCP24821 2201 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 TMEM250H0YL14 139 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 STAG3L2P0CL84 134 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 IMMP2LQ96T52 175 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 RTBDNQ9BSG5 229 aaPredicted RBP7.53□□□□□ -1.2
EPB41-208ENST00000460378 RNF126Q9BV68 326 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 IGHV1OR15-1A0A075B7D0 117 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 LOC107984156A0A0G2JMH3 177 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 IGKV1-5P01602 117 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 CTSGP08311 255 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 HERVK_113P61574 105 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 ARL17AQ8IVW1 177 aa7.53□□□□□ -1.2
EPB41-208ENST00000460378 Q9HAA7 133 aa7.52□□□□□ -1.21
EPB41-208ENST00000460378 RETNQ9HD89 108 aa7.52□□□□□ -1.21
EPB41-208ENST00000460378 BEAN1Q3B7T3 259 aa7.52□□□□□ -1.21
EPB41-208ENST00000460378 RHODO00212 210 aa7.52□□□□□ -1.21
EPB41-208ENST00000460378 ODF3L1Q8IXM7 274 aa7.52□□□□□ -1.21
EPB41-208ENST00000460378 GFI1Q99684 422 aa7.52□□□□□ -1.21
EPB41-208ENST00000460378 H0YIZ8 118 aa7.52□□□□□ -1.21
EPB41-208ENST00000460378 SLC17A3O00476 420 aa7.52□□□□□ -1.21
EPB41-208ENST00000460378 BTF3P20290 206 aaKnown RBP7.52□□□□□ -1.21
EPB41-208ENST00000460378 FOXA3P55318 350 aaPredicted RBP7.52□□□□□ -1.21
EPB41-208ENST00000460378 TWIST1Q15672 202 aa7.52□□□□□ -1.21
EPB41-208ENST00000460378 TRAV12-2A0A075B6T6 113 aa7.51□□□□□ -1.21
EPB41-208ENST00000460378 SNCGO76070 127 aa7.51□□□□□ -1.21
EPB41-208ENST00000460378 FHL3Q13643 280 aa7.51□□□□□ -1.21
EPB41-208ENST00000460378 M0R3E3 92 aa7.51□□□□□ -1.21
EPB41-208ENST00000460378 CKS2P33552 79 aa7.51□□□□□ -1.21
EPB41-208ENST00000460378 NANOS2P60321 138 aaKnown RBP7.51□□□□□ -1.21
EPB41-208ENST00000460378 C16orf54Q6UWD8 224 aa7.51□□□□□ -1.21
EPB41-208ENST00000460378 ARL6IP6Q8N6S5 226 aa7.51□□□□□ -1.21
EPB41-208ENST00000460378 KLK9Q9UKQ9 250 aa7.51□□□□□ -1.21
EPB41-208ENST00000460378 TP53TG1Q9Y2A0 90 aa7.51□□□□□ -1.21
EPB41-208ENST00000460378 PSMG3Q9BT73 122 aaPredicted RBP7.51□□□□□ -1.21
EPB41-208ENST00000460378 ZNF114Q8NC26 417 aa7.51□□□□□ -1.21
EPB41-208ENST00000460378 TMEM213A2RRL7 107 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 H7C2G1 150 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 IGLC1P0CG04 106 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 PDE6HQ13956 83 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 IGFL4Q6B9Z1 124 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 NPCDR1Q9BY65 106 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 K7EIL1 84 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 K7EIM0 57 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 MLANAQ16655 118 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 CENPWQ5EE01 88 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 UNQ9165/PRO28630Q6UXU0 137 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 NEGR1Q7Z3B1 354 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 IGHV4-28A0A0C4DH34 117 aa7.5□□□□□ -1.21
EPB41-208ENST00000460378 TEX22C9J3V5 150 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms