RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 PARLQ9H300 379 aa9.06□□□□□ -0.96
HDAC4-206ENST00000460235 PKD1L1Q8TDX9 2849 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 M0R2Z0 102 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 IGLV2-11P01706 119 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 RNASE4P34096 147 aaKnown RBP9.05□□□□□ -0.96
HDAC4-206ENST00000460235 CENPWQ5EE01 88 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 FAM162BQ5T6X4 162 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 COX8CQ7Z4L0 72 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 Q8TAT8 98 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 KCNS1Q96KK3 526 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 LINC00479Q96M42 142 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 B9D2Q9BPU9 175 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 PYGO2Q9BRQ0 406 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 NOTCH1P46531 2555 aa9.05□□□□□ -0.96
HDAC4-206ENST00000460235 SPRY2O43597 315 aa9.04□□□□□ -0.96
HDAC4-206ENST00000460235 PFN1P07737 140 aaKnown RBP9.04□□□□□ -0.96
HDAC4-206ENST00000460235 TMEM241Q24JQ0 296 aa9.04□□□□□ -0.96
HDAC4-206ENST00000460235 FAM159AQ6UWV7 190 aa9.04□□□□□ -0.96
HDAC4-206ENST00000460235 ZFAND2AQ8N6M9 145 aa9.04□□□□□ -0.96
HDAC4-206ENST00000460235 SGK494Q96LW2 274 aa9.04□□□□□ -0.96
HDAC4-206ENST00000460235 LINC01587Q99440 93 aa9.04□□□□□ -0.96
HDAC4-206ENST00000460235 XKRY2A2RUG3 117 aa9.03□□□□□ -0.96
HDAC4-206ENST00000460235 J3KRW8 73 aa9.03□□□□□ -0.96
HDAC4-206ENST00000460235 GCGP01275 180 aa9.03□□□□□ -0.96
HDAC4-206ENST00000460235 MGST1P10620 155 aaKnown RBP9.03□□□□□ -0.96
HDAC4-206ENST00000460235 FXYD7P58549 80 aa9.03□□□□□ -0.96
HDAC4-206ENST00000460235 GFI1BQ5VTD9 330 aa9.03□□□□□ -0.96
HDAC4-206ENST00000460235 Q6AWC8 147 aa9.03□□□□□ -0.96
HDAC4-206ENST00000460235 RNF183Q96D59 192 aa9.03□□□□□ -0.96
HDAC4-206ENST00000460235 NEU1Q99519 415 aa9.03□□□□□ -0.96
HDAC4-206ENST00000460235 NAT8Q9UHE5 227 aa9.03□□□□□ -0.96
HDAC4-206ENST00000460235 TRAV12-3A0A0B4J271 114 aa9.02□□□□□ -0.97
HDAC4-206ENST00000460235 TMEM189A5PLL7 270 aa9.02□□□□□ -0.97
HDAC4-206ENST00000460235 SFTA3P0C7M3 94 aa9.02□□□□□ -0.97
HDAC4-206ENST00000460235 PNRC1Q12796 327 aaPredicted RBP9.02□□□□□ -0.97
HDAC4-206ENST00000460235 RRN3P1Q2M238 152 aa9.02□□□□□ -0.97
HDAC4-206ENST00000460235 ZNF493Q6ZR52 646 aa9.02□□□□□ -0.97
HDAC4-206ENST00000460235 LINC00467Q9BRT7 94 aa9.02□□□□□ -0.97
HDAC4-206ENST00000460235 DERL1Q9BUN8 251 aa9.02□□□□□ -0.97
HDAC4-206ENST00000460235 TRGV11A0A075B6L2 103 aa9.01□□□□□ -0.97
HDAC4-206ENST00000460235 TRAV12-2A0A075B6T6 113 aa9.01□□□□□ -0.97
HDAC4-206ENST00000460235 IGHV3OR16-12A0A075B7B8 117 aa9.01□□□□□ -0.97
HDAC4-206ENST00000460235 MIFP14174 115 aa9.01□□□□□ -0.97
HDAC4-206ENST00000460235 RPS20P60866 119 aaKnown RBP9.01□□□□□ -0.97
HDAC4-206ENST00000460235 DEFB135Q30KP9 77 aa9.01□□□□□ -0.97
HDAC4-206ENST00000460235 C15orf54Q8N8G6 183 aa9.01□□□□□ -0.97
HDAC4-206ENST00000460235 MLST8Q9BVC4 326 aa9.01□□□□□ -0.97
HDAC4-206ENST00000460235 SDF2L1Q9HCN8 221 aa9.01□□□□□ -0.97
HDAC4-206ENST00000460235 NBEAL1Q6ZS30 2694 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 AGRNO00468 2067 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 IGHV1OR15-1A0A075B7D0 117 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 TEX48A0A1B0GUV7 120 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 TMEM218A2RU14 115 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 CRXO43186 299 aaPredicted RBP9□□□□□ -0.97
HDAC4-206ENST00000460235 PRB4P10163 310 aaPredicted RBP9□□□□□ -0.97
HDAC4-206ENST00000460235 BTN1A1Q13410 526 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 ZNF705AQ6ZN79 300 aaPredicted RBP9□□□□□ -0.97
HDAC4-206ENST00000460235 SBSPONQ8IVN8 264 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 CSNK1G2-AS1Q8NCQ2 148 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 OR11H2Q8NH07 326 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 TVP23CQ96ET8 276 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 C8orf49Q96NF6 230 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 TM2D3Q9BRN9 247 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 SEC11CQ9BY50 192 aa9□□□□□ -0.97
HDAC4-206ENST00000460235 CBY3A6NI87 242 aa8.99□□□□□ -0.97
HDAC4-206ENST00000460235 KRBOX1C9JBD0 128 aa8.99□□□□□ -0.97
HDAC4-206ENST00000460235 F8W036 122 aa8.99□□□□□ -0.97
HDAC4-206ENST00000460235 ZNF324O75467 553 aaPredicted RBP8.99□□□□□ -0.97
HDAC4-206ENST00000460235 P01737 135 aa8.99□□□□□ -0.97
HDAC4-206ENST00000460235 ORM1P02763 201 aa8.99□□□□□ -0.97
HDAC4-206ENST00000460235 GIG44P09565 113 aaPredicted RBP8.99□□□□□ -0.97
HDAC4-206ENST00000460235 SRSF3P84103 164 aaKnown RBP8.99□□□□□ -0.97
HDAC4-206ENST00000460235 TDRG1Q3Y452 100 aa8.99□□□□□ -0.97
HDAC4-206ENST00000460235 ANXA2RQ3ZCQ2 193 aa8.99□□□□□ -0.97
HDAC4-206ENST00000460235 PRR27Q6MZM9 219 aa8.99□□□□□ -0.97
HDAC4-206ENST00000460235 OCC1Q8TAD7 63 aa8.99□□□□□ -0.97
HDAC4-206ENST00000460235 C16orf74Q96GX8 76 aa8.99□□□□□ -0.97
HDAC4-206ENST00000460235 ZC2HC1AQ96GY0 325 aa8.99□□□□□ -0.97
HDAC4-206ENST00000460235 SH2D1AO60880 128 aa8.98□□□□□ -0.97
HDAC4-206ENST00000460235 HTN1P15515 57 aa8.98□□□□□ -0.97
HDAC4-206ENST00000460235 OR5I1Q13606 314 aa8.98□□□□□ -0.97
HDAC4-206ENST00000460235 C1orf158Q8N1D5 194 aa8.98□□□□□ -0.97
HDAC4-206ENST00000460235 NHLRC2Q8NBF2 726 aa8.98□□□□□ -0.97
HDAC4-206ENST00000460235 TMEM263Q8WUH6 116 aaKnown RBP8.98□□□□□ -0.97
HDAC4-206ENST00000460235 NAGKQ9UJ70 344 aa8.98□□□□□ -0.97
HDAC4-206ENST00000460235 SNURFLB1AK76 121 aa8.97□□□□□ -0.97
HDAC4-206ENST00000460235 B4DEV8 164 aa8.97□□□□□ -0.97
HDAC4-206ENST00000460235 C9JQL5 133 aa8.97□□□□□ -0.97
HDAC4-206ENST00000460235 PPP1R2P9O14990 202 aa8.97□□□□□ -0.97
HDAC4-206ENST00000460235 CXCL1P09341 107 aa8.97□□□□□ -0.97
HDAC4-206ENST00000460235 S100A4P26447 101 aaKnown RBP8.97□□□□□ -0.97
HDAC4-206ENST00000460235 ERVFC1-1P60608 527 aa8.97□□□□□ -0.97
HDAC4-206ENST00000460235 ZNF415Q09FC8 603 aa8.97□□□□□ -0.97
HDAC4-206ENST00000460235 ADIRFQ15847 76 aa8.97□□□□□ -0.97
HDAC4-206ENST00000460235 IBA57Q5T440 356 aaKnown RBP8.97□□□□□ -0.97
HDAC4-206ENST00000460235 FAM231DQ6ZW35 169 aa8.97□□□□□ -0.97
HDAC4-206ENST00000460235 LINC01551Q86U37 167 aa8.97□□□□□ -0.97
HDAC4-206ENST00000460235 OVOL2Q9BRP0 275 aa8.97□□□□□ -0.97
HDAC4-206ENST00000460235 TRBV20OR9-2A0A075B6H5 130 aa8.96□□□□□ -0.98
HDAC4-206ENST00000460235 MT-ND4LP03901 98 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms