RNA–Protein interactions for RNA: ENST00000460231.5

PCNP-202, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 1 (best)

Gene PCNP, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-202ENST00000460231 MUC21A0A0G2JKD1 596 aa10.6□□□□□ -0.71
PCNP-202ENST00000460231 MUC21A0A140T8X8 626 aa10.6□□□□□ -0.71
PCNP-202ENST00000460231 A0A1W2PPQ1 181 aa10.6□□□□□ -0.71
PCNP-202ENST00000460231 S100A9P06702 114 aaKnown RBP10.6□□□□□ -0.71
PCNP-202ENST00000460231 IGLL1P15814 213 aa10.6□□□□□ -0.71
PCNP-202ENST00000460231 ID1P41134 155 aa10.6□□□□□ -0.71
PCNP-202ENST00000460231 MUC21Q5SSG8 566 aa10.6□□□□□ -0.71
PCNP-202ENST00000460231 ARL6IP6Q8N6S5 226 aa10.6□□□□□ -0.71
PCNP-202ENST00000460231 OR10J6PQ8NGY7 276 aa10.6□□□□□ -0.71
PCNP-202ENST00000460231 C19orf73Q9NVV2 129 aa10.6□□□□□ -0.71
PCNP-202ENST00000460231 MGAM2Q2M2H8 2515 aa10.6□□□□□ -0.71
PCNP-202ENST00000460231 SERTM2A0A1B0GWG4 89 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 AMTNQ6UX39 209 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 ANAPC16Q96DE5 110 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 SAV1Q9H4B6 383 aaPredicted RBP10.59□□□□□ -0.71
PCNP-202ENST00000460231 IGKV3D-20A0A0C4DH25 116 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 RBMY1A1P0DJD3 496 aaKnown RBP10.59□□□□□ -0.71
PCNP-202ENST00000460231 RBMY1CP0DJD4 496 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 SSTP61278 116 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 PAFAH1B2P68402 229 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 RBMY1FQ15415 496 aaKnown RBP10.59□□□□□ -0.71
PCNP-202ENST00000460231 SPINK13Q1W4C9 94 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 FAM231DQ6ZW35 169 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 COX8CQ7Z4L0 72 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 SPAG8Q99932 426 aaPredicted RBP10.59□□□□□ -0.71
PCNP-202ENST00000460231 ZNF747Q9BV97 191 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 CTDSP1Q9GZU7 261 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 CLEC5AQ9NY25 188 aa10.59□□□□□ -0.71
PCNP-202ENST00000460231 C3orf56Q8N813 242 aa10.58□□□□□ -0.72
PCNP-202ENST00000460231 NEU1Q99519 415 aa10.58□□□□□ -0.72
PCNP-202ENST00000460231 TUBA4BQ9H853 241 aa10.58□□□□□ -0.72
PCNP-202ENST00000460231 H3BMM0 161 aa10.58□□□□□ -0.72
PCNP-202ENST00000460231 GATCO43716 136 aaKnown RBP10.58□□□□□ -0.72
PCNP-202ENST00000460231 P01737 135 aa10.58□□□□□ -0.72
PCNP-202ENST00000460231 RNASE4P34096 147 aaKnown RBP10.58□□□□□ -0.72
PCNP-202ENST00000460231 OR2D3Q8NGH3 330 aa10.58□□□□□ -0.72
PCNP-202ENST00000460231 RPP21Q9H633 154 aaKnown RBP10.58□□□□□ -0.72
PCNP-202ENST00000460231 IL36BQ9NZH7 164 aa10.58□□□□□ -0.72
PCNP-202ENST00000460231 GRIFINA4D1Z8 144 aa10.57□□□□□ -0.72
PCNP-202ENST00000460231 SMUG1Q53HV7 270 aa10.57□□□□□ -0.72
PCNP-202ENST00000460231 FAM162BQ5T6X4 162 aa10.57□□□□□ -0.72
PCNP-202ENST00000460231 SMIM12Q96EX1 92 aa10.57□□□□□ -0.72
PCNP-202ENST00000460231 SMIM27A0A1W2PRY6 76 aa10.56□□□□□ -0.72
PCNP-202ENST00000460231 OXLD1Q5BKU9 147 aa10.56□□□□□ -0.72
PCNP-202ENST00000460231 SAPCD1Q5SSQ6 148 aa10.56□□□□□ -0.72
PCNP-202ENST00000460231 C15orf54Q8N8G6 183 aa10.56□□□□□ -0.72
PCNP-202ENST00000460231 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
PCNP-202ENST00000460231 HIGD1CA8MV81 97 aa10.56□□□□□ -0.72
PCNP-202ENST00000460231 CRXO43186 299 aaPredicted RBP10.56□□□□□ -0.72
PCNP-202ENST00000460231 BEAN1Q3B7T3 259 aa10.56□□□□□ -0.72
PCNP-202ENST00000460231 NUP35Q8NFH5 326 aa10.56□□□□□ -0.72
PCNP-202ENST00000460231 PPP1R14DQ9NXH3 145 aa10.56□□□□□ -0.72
PCNP-202ENST00000460231 CXorf65A6NEN9 183 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 OR4C46A6NHA9 309 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 GFI1BQ5VTD9 330 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 MRPL54Q6P161 138 aaKnown RBP10.55□□□□□ -0.72
PCNP-202ENST00000460231 FOXI2Q6ZQN5 318 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 PYGO2Q9BRQ0 406 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 TRAV12-3A0A0B4J271 114 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 KLLNB2CW77 178 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 RAB5AP20339 215 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 PGLYRP4Q96LB8 373 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 NAGKQ9UJ70 344 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 TP53TG3Q9ULZ0 132 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 HLA-DRB4X5D2U9 266 aa10.55□□□□□ -0.72
PCNP-202ENST00000460231 TRAV25A0A0B4J276 109 aa10.54□□□□□ -0.72
PCNP-202ENST00000460231 ORM1P02763 201 aa10.54□□□□□ -0.72
PCNP-202ENST00000460231 GPX1P07203 203 aa10.54□□□□□ -0.72
PCNP-202ENST00000460231 CRISP2P16562 243 aa10.54□□□□□ -0.72
PCNP-202ENST00000460231 EBLN2Q6P2I7 272 aa10.54□□□□□ -0.72
PCNP-202ENST00000460231 C12orf54Q6X4T0 127 aa10.54□□□□□ -0.72
PCNP-202ENST00000460231 ZFP82Q8N141 532 aa10.54□□□□□ -0.72
PCNP-202ENST00000460231 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
PCNP-202ENST00000460231 DAZAP1Q96EP5 407 aaKnown RBP10.54□□□□□ -0.72
PCNP-202ENST00000460231 FAM210BQ96KR6 192 aa10.54□□□□□ -0.72
PCNP-202ENST00000460231 TPPP3Q9BW30 176 aa10.54□□□□□ -0.72
PCNP-202ENST00000460231 MUC4Q99102 2169 aa10.54□□□□□ -0.72
PCNP-202ENST00000460231 TRAV2A0A0B4J234 112 aa10.53□□□□□ -0.72
PCNP-202ENST00000460231 PPP1R2P9O14990 202 aa10.53□□□□□ -0.72
PCNP-202ENST00000460231 ZNF324O75467 553 aaPredicted RBP10.53□□□□□ -0.72
PCNP-202ENST00000460231 DEFB125Q8N687 156 aa10.53□□□□□ -0.72
PCNP-202ENST00000460231 WFDC9Q8NEX5 89 aa10.53□□□□□ -0.72
PCNP-202ENST00000460231 TRBV24-1A0A075B6N3 115 aa10.53□□□□□ -0.72
PCNP-202ENST00000460231 GNRH2O43555 120 aa10.53□□□□□ -0.72
PCNP-202ENST00000460231 FOXA3P55318 350 aaPredicted RBP10.53□□□□□ -0.72
PCNP-202ENST00000460231 NDFIP1Q9BT67 221 aa10.53□□□□□ -0.72
PCNP-202ENST00000460231 FABP5P3A8MUU1 101 aa10.52□□□□□ -0.72
PCNP-202ENST00000460231 GIG44P09565 113 aaPredicted RBP10.52□□□□□ -0.72
PCNP-202ENST00000460231 LURAP1LQ8IV03 231 aa10.52□□□□□ -0.72
PCNP-202ENST00000460231 IMMP2LQ96T52 175 aa10.52□□□□□ -0.72
PCNP-202ENST00000460231 OR11H12B2RN74 326 aa10.52□□□□□ -0.73
PCNP-202ENST00000460231 PHOX2AO14813 284 aa10.52□□□□□ -0.73
PCNP-202ENST00000460231 ARMS2P0C7Q2 107 aa10.52□□□□□ -0.73
PCNP-202ENST00000460231 RPS10P46783 165 aaKnown RBP10.52□□□□□ -0.73
PCNP-202ENST00000460231 ANXA2RQ3ZCQ2 193 aa10.52□□□□□ -0.73
PCNP-202ENST00000460231 SAMD13Q5VXD3 122 aa10.52□□□□□ -0.73
PCNP-202ENST00000460231 TMEM158Q8WZ71 300 aa10.52□□□□□ -0.73
PCNP-202ENST00000460231 MSRB1Q9NZV6 116 aa10.52□□□□□ -0.73
PCNP-202ENST00000460231 TMEM189A5PLL7 270 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms