RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 C1orf158Q8N1D5 194 aa12.24□□□□□ -0.45
TRIM39-211ENST00000458516 RCHY1Q96PM5 261 aa12.24□□□□□ -0.45
TRIM39-211ENST00000458516 SPATA25Q9BR10 227 aa12.24□□□□□ -0.45
TRIM39-211ENST00000458516 OVOL2Q9BRP0 275 aa12.24□□□□□ -0.45
TRIM39-211ENST00000458516 GPX1P07203 203 aa12.23□□□□□ -0.45
TRIM39-211ENST00000458516 SRP19P09132 144 aaKnown RBP12.23□□□□□ -0.45
TRIM39-211ENST00000458516 TP53TG1Q9Y2A0 90 aa12.23□□□□□ -0.45
TRIM39-211ENST00000458516 C9JQL5 133 aa12.22□□□□□ -0.45
TRIM39-211ENST00000458516 SPRY2O43597 315 aa12.22□□□□□ -0.45
TRIM39-211ENST00000458516 RNASE4P34096 147 aaKnown RBP12.22□□□□□ -0.45
TRIM39-211ENST00000458516 TAS2R60P59551 318 aa12.22□□□□□ -0.45
TRIM39-211ENST00000458516 PEA15Q15121 130 aa12.22□□□□□ -0.45
TRIM39-211ENST00000458516 SAPCD1Q5SSQ6 148 aa12.22□□□□□ -0.45
TRIM39-211ENST00000458516 ZNF705AQ6ZN79 300 aaPredicted RBP12.22□□□□□ -0.45
TRIM39-211ENST00000458516 C20orf144Q9BQM9 153 aa12.22□□□□□ -0.45
TRIM39-211ENST00000458516 ZFP30Q9Y2G7 519 aa12.22□□□□□ -0.45
TRIM39-211ENST00000458516 TRAV12-3A0A0B4J271 114 aa12.21□□□□□ -0.45
TRIM39-211ENST00000458516 RAB19A4D1S5 217 aa12.21□□□□□ -0.45
TRIM39-211ENST00000458516 ZNF324O75467 553 aaPredicted RBP12.21□□□□□ -0.45
TRIM39-211ENST00000458516 Q6AWC8 147 aa12.21□□□□□ -0.45
TRIM39-211ENST00000458516 Q6ZQT7 251 aa12.21□□□□□ -0.45
TRIM39-211ENST00000458516 COX8CQ7Z4L0 72 aa12.21□□□□□ -0.45
TRIM39-211ENST00000458516 PARLQ9H300 379 aa12.21□□□□□ -0.45
TRIM39-211ENST00000458516 GOLT1BQ9Y3E0 138 aa12.21□□□□□ -0.45
TRIM39-211ENST00000458516 TRBV20OR9-2A0A075B6H5 130 aa12.2□□□□□ -0.46
TRIM39-211ENST00000458516 IGHV3OR16-12A0A075B7B8 117 aa12.2□□□□□ -0.46
TRIM39-211ENST00000458516 ZNF80P51504 273 aaPredicted RBP12.2□□□□□ -0.46
TRIM39-211ENST00000458516 SMUG1Q53HV7 270 aa12.2□□□□□ -0.46
TRIM39-211ENST00000458516 CENPWQ5EE01 88 aa12.2□□□□□ -0.46
TRIM39-211ENST00000458516 BAGE2Q86Y30 109 aa12.2□□□□□ -0.46
TRIM39-211ENST00000458516 TMEM183AQ8IXX5 376 aa12.2□□□□□ -0.46
TRIM39-211ENST00000458516 TMEM256Q8N2U0 113 aa12.2□□□□□ -0.46
TRIM39-211ENST00000458516 NHLRC2Q8NBF2 726 aa12.2□□□□□ -0.46
TRIM39-211ENST00000458516 SMDT1Q9H4I9 107 aa12.2□□□□□ -0.46
TRIM39-211ENST00000458516 ZMAT4Q9H898 229 aa12.2□□□□□ -0.46
TRIM39-211ENST00000458516 X6R8D5 127 aa12.2□□□□□ -0.46
TRIM39-211ENST00000458516 GCGP01275 180 aa12.19□□□□□ -0.46
TRIM39-211ENST00000458516 NHLRC4P0CG21 123 aaPredicted RBP12.19□□□□□ -0.46
TRIM39-211ENST00000458516 CEBPGP53567 150 aa12.19□□□□□ -0.46
TRIM39-211ENST00000458516 OR11H2Q8NH07 326 aa12.19□□□□□ -0.46
TRIM39-211ENST00000458516 ZC2HC1AQ96GY0 325 aa12.19□□□□□ -0.46
TRIM39-211ENST00000458516 NIPSNAP3BQ9BS92 247 aa12.19□□□□□ -0.46
TRIM39-211ENST00000458516 MLST8Q9BVC4 326 aa12.19□□□□□ -0.46
TRIM39-211ENST00000458516 LINC00862A6NCI5 91 aa12.18□□□□□ -0.46
TRIM39-211ENST00000458516 H7BYZ3 331 aa12.18□□□□□ -0.46
TRIM39-211ENST00000458516 IGLV2-8P01709 118 aa12.18□□□□□ -0.46
TRIM39-211ENST00000458516 ZNF674Q2M3X9 581 aa12.18□□□□□ -0.46
TRIM39-211ENST00000458516 LINC01587Q99440 93 aa12.18□□□□□ -0.46
TRIM39-211ENST00000458516 NEU1Q99519 415 aa12.18□□□□□ -0.46
TRIM39-211ENST00000458516 TMEM208Q9BTX3 173 aa12.18□□□□□ -0.46
TRIM39-211ENST00000458516 TENM3Q9P273 2699 aa12.17□□□□□ -0.46
TRIM39-211ENST00000458516 TRAV21A0A0B4J279 112 aa12.17□□□□□ -0.46
TRIM39-211ENST00000458516 C9JCJ5 164 aa12.17□□□□□ -0.46
TRIM39-211ENST00000458516 GNG4P50150 75 aa12.17□□□□□ -0.46
TRIM39-211ENST00000458516 NBEAL2Q6ZNJ1 2754 aa12.16□□□□□ -0.46
TRIM39-211ENST00000458516 PGPEP1LA6NFU8 196 aa12.16□□□□□ -0.46
TRIM39-211ENST00000458516 ZNF705GA8MUZ8 300 aaPredicted RBP12.16□□□□□ -0.46
TRIM39-211ENST00000458516 PRM2P04554 102 aa12.16□□□□□ -0.46
TRIM39-211ENST00000458516 PFN1P07737 140 aaKnown RBP12.16□□□□□ -0.46
TRIM39-211ENST00000458516 CRIP1P50238 77 aa12.16□□□□□ -0.46
TRIM39-211ENST00000458516 COMMD7Q86VX2 200 aa12.16□□□□□ -0.46
TRIM39-211ENST00000458516 SMIM12Q96EX1 92 aa12.16□□□□□ -0.46
TRIM39-211ENST00000458516 PYGO2Q9BRQ0 406 aa12.16□□□□□ -0.46
TRIM39-211ENST00000458516 SMIM9A6NGZ8 99 aa12.15□□□□□ -0.46
TRIM39-211ENST00000458516 Q8NAQ8 132 aa12.15□□□□□ -0.46
TRIM39-211ENST00000458516 SMIM7Q9BQ49 75 aa12.15□□□□□ -0.46
TRIM39-211ENST00000458516 LINC00467Q9BRT7 94 aa12.15□□□□□ -0.46
TRIM39-211ENST00000458516 C11orf21Q9P2W6 132 aa12.15□□□□□ -0.46
TRIM39-211ENST00000458516 IGHV1OR15-1A0A075B7D0 117 aa12.14□□□□□ -0.47
TRIM39-211ENST00000458516 IGHV4-28A0A0C4DH34 117 aa12.14□□□□□ -0.47
TRIM39-211ENST00000458516 ZNF727A8MUV8 499 aa12.14□□□□□ -0.47
TRIM39-211ENST00000458516 SH2D1AO60880 128 aa12.14□□□□□ -0.47
TRIM39-211ENST00000458516 MIFP14174 115 aa12.14□□□□□ -0.47
TRIM39-211ENST00000458516 MUC21Q5SSG8 566 aa12.14□□□□□ -0.47
TRIM39-211ENST00000458516 UQCC3Q6UW78 93 aa12.14□□□□□ -0.47
TRIM39-211ENST00000458516 FABP5P3A8MUU1 101 aa12.13□□□□□ -0.47
TRIM39-211ENST00000458516 HTN1P15515 57 aa12.13□□□□□ -0.47
TRIM39-211ENST00000458516 AZU1P20160 251 aa12.13□□□□□ -0.47
TRIM39-211ENST00000458516 RRN3P1Q2M238 152 aa12.13□□□□□ -0.47
TRIM39-211ENST00000458516 FAM162BQ5T6X4 162 aa12.13□□□□□ -0.47
TRIM39-211ENST00000458516 EIF4E3Q8N5X7 224 aaKnown RBP12.13□□□□□ -0.47
TRIM39-211ENST00000458516 OCC1Q8TAD7 63 aa12.13□□□□□ -0.47
TRIM39-211ENST00000458516 NAGKQ9UJ70 344 aa12.13□□□□□ -0.47
TRIM39-211ENST00000458516 COL7A1Q02388 2944 aa12.12□□□□□ -0.47
TRIM39-211ENST00000458516 K7EN84 100 aa12.12□□□□□ -0.47
TRIM39-211ENST00000458516 SFTA3P0C7M3 94 aa12.12□□□□□ -0.47
TRIM39-211ENST00000458516 MGST1P10620 155 aaKnown RBP12.12□□□□□ -0.47
TRIM39-211ENST00000458516 TDRG1Q3Y452 100 aa12.12□□□□□ -0.47
TRIM39-211ENST00000458516 ANXA2RQ3ZCQ2 193 aa12.12□□□□□ -0.47
TRIM39-211ENST00000458516 FAM74A3Q4VXF1 159 aa12.12□□□□□ -0.47
TRIM39-211ENST00000458516 PRR27Q6MZM9 219 aa12.12□□□□□ -0.47
TRIM39-211ENST00000458516 TP53TG3Q9ULZ0 132 aa12.12□□□□□ -0.47
TRIM39-211ENST00000458516 LY96Q9Y6Y9 160 aa12.12□□□□□ -0.47
TRIM39-211ENST00000458516 U3KQK5 164 aa12.12□□□□□ -0.47
TRIM39-211ENST00000458516 OR5I1Q13606 314 aa12.11□□□□□ -0.47
TRIM39-211ENST00000458516 SOHLH1Q5JUK2 328 aa12.11□□□□□ -0.47
TRIM39-211ENST00000458516 FAM159AQ6UWV7 190 aa12.11□□□□□ -0.47
TRIM39-211ENST00000458516 RNASE8Q8TDE3 154 aaKnown RBP12.11□□□□□ -0.47
TRIM39-211ENST00000458516 C11orf68Q9H3H3 251 aaKnown RBP12.11□□□□□ -0.47
TRIM39-211ENST00000458516 IGKV3D-20A0A0C4DH25 116 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms