RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 HOXB4P17483 251 aaPredicted RBP15.57■□□□□ 0.08
SNX27-204ENST00000458013 YPEL3P61236 119 aaPredicted RBP15.57■□□□□ 0.08
SNX27-204ENST00000458013 DYNAPQ8N1N2 210 aa15.57■□□□□ 0.08
SNX27-204ENST00000458013 FXYD5Q96DB9 178 aa15.57■□□□□ 0.08
SNX27-204ENST00000458013 VWA8A3KMH1 1905 aa15.56■□□□□ 0.08
SNX27-204ENST00000458013 IGLV3-9A0A075B6K5 115 aa15.56■□□□□ 0.08
SNX27-204ENST00000458013 IGLV10-54A0A075B6I4 117 aa15.56■□□□□ 0.08
SNX27-204ENST00000458013 C22orf46C9J442 243 aa15.56■□□□□ 0.08
SNX27-204ENST00000458013 FNDC10F2Z333 226 aa15.56■□□□□ 0.08
SNX27-204ENST00000458013 IFITM1P13164 125 aa15.56■□□□□ 0.08
SNX27-204ENST00000458013 WDR81Q562E7 1941 aa15.56■□□□□ 0.08
SNX27-204ENST00000458013 MED12Q93074 2177 aa15.56■□□□□ 0.08
SNX27-204ENST00000458013 VOPP1Q96AW1 172 aa15.55■□□□□ 0.08
SNX27-204ENST00000458013 RITA1Q96K30 269 aa15.55■□□□□ 0.08
SNX27-204ENST00000458013 SDK2Q58EX2 2172 aa15.55■□□□□ 0.08
SNX27-204ENST00000458013 KIAA2026Q5HYC2 2103 aa15.55■□□□□ 0.08
SNX27-204ENST00000458013 K7ENP7 123 aa15.55■□□□□ 0.08
SNX27-204ENST00000458013 K7EP34 96 aa15.55■□□□□ 0.08
SNX27-204ENST00000458013 UBL5Q9BZL1 73 aa15.55■□□□□ 0.08
SNX27-204ENST00000458013 UBE2BP63146 152 aa15.54■□□□□ 0.08
SNX27-204ENST00000458013 APOC4P55056 127 aa15.54■□□□□ 0.08
SNX27-204ENST00000458013 U3KQE9 123 aa15.54■□□□□ 0.08
SNX27-204ENST00000458013 A0A1W2PPM0 123 aa15.54■□□□□ 0.08
SNX27-204ENST00000458013 NDUFA4O00483 81 aa15.54■□□□□ 0.08
SNX27-204ENST00000458013 TRACP01848 142 aa15.54■□□□□ 0.08
SNX27-204ENST00000458013 COX8AP10176 69 aa15.54■□□□□ 0.08
SNX27-204ENST00000458013 ZSWIM8A7E2V4 1837 aa15.54■□□□□ 0.08
SNX27-204ENST00000458013 C15orf65H3BRN8 121 aa15.54■□□□□ 0.08
SNX27-204ENST00000458013 IGHV4-59P01825 116 aa15.53■□□□□ 0.08
SNX27-204ENST00000458013 SLURP1P55000 103 aa15.53■□□□□ 0.08
SNX27-204ENST00000458013 TCF20Q9UGU0 1960 aaKnown RBP15.53■□□□□ 0.08
SNX27-204ENST00000458013 IGHV7-4-1A0A0J9YVY3 117 aa15.53■□□□□ 0.08
SNX27-204ENST00000458013 C5orf47Q569G3 176 aa15.53■□□□□ 0.08
SNX27-204ENST00000458013 IGHV3-30P01768 117 aa15.52■□□□□ 0.08
SNX27-204ENST00000458013 IGHV3-33P01772 117 aa15.52■□□□□ 0.08
SNX27-204ENST00000458013 IGHV3-30-3P0DP02 117 aa15.52■□□□□ 0.08
SNX27-204ENST00000458013 IGHV3-30-5P0DP03 117 aa15.52■□□□□ 0.08
SNX27-204ENST00000458013 MRPL52Q86TS9 123 aaKnown RBP15.52■□□□□ 0.08
SNX27-204ENST00000458013 RPL39LQ96EH5 51 aaKnown RBP15.52■□□□□ 0.08
SNX27-204ENST00000458013 LY6G6EA0A0G2JKS1 128 aa15.52■□□□□ 0.08
SNX27-204ENST00000458013 SHISA9B4DS77 424 aa15.52■□□□□ 0.08
SNX27-204ENST00000458013 CRYBA4P53673 196 aa15.52■□□□□ 0.08
SNX27-204ENST00000458013 WIPF2Q8TF74 440 aaPredicted RBP15.52■□□□□ 0.08
SNX27-204ENST00000458013 U3KQA8 63 aa15.52■□□□□ 0.08
SNX27-204ENST00000458013 PLXND1Q9Y4D7 1925 aa15.52■□□□□ 0.07
SNX27-204ENST00000458013 K7EP13 123 aa15.52■□□□□ 0.07
SNX27-204ENST00000458013 RHODO00212 210 aa15.51■□□□□ 0.07
SNX27-204ENST00000458013 PRO1854Q9UHT4 67 aa15.51■□□□□ 0.07
SNX27-204ENST00000458013 J3QQQ9 107 aa15.51■□□□□ 0.07
SNX27-204ENST00000458013 SIP14410 1827 aa15.51■□□□□ 0.07
SNX27-204ENST00000458013 DEFB112Q30KQ8 113 aa15.51■□□□□ 0.07
SNX27-204ENST00000458013 FRMPD3Q5JV73 1810 aa15.51■□□□□ 0.07
SNX27-204ENST00000458013 C5orf38Q86SI9 138 aa15.51■□□□□ 0.07
SNX27-204ENST00000458013 Q8TCH9 128 aa15.51■□□□□ 0.07
SNX27-204ENST00000458013 PPDPFLQ8WWR9 84 aa15.51■□□□□ 0.07
SNX27-204ENST00000458013 PLXNA3P51805 1871 aa15.5■□□□□ 0.07
SNX27-204ENST00000458013 EGR2P11161 476 aaPredicted RBP15.5■□□□□ 0.07
SNX27-204ENST00000458013 MYO7BQ6PIF6 2116 aa15.5■□□□□ 0.07
SNX27-204ENST00000458013 OR11H6Q8NGC7 330 aa15.5■□□□□ 0.07
SNX27-204ENST00000458013 NRGNQ92686 78 aa15.5■□□□□ 0.07
SNX27-204ENST00000458013 DKK4Q9UBT3 224 aa15.5■□□□□ 0.07
SNX27-204ENST00000458013 FNDC1Q4ZHG4 1894 aaPredicted RBP15.5■□□□□ 0.07
SNX27-204ENST00000458013 PCP2Q8IVA1 136 aa15.49■□□□□ 0.07
SNX27-204ENST00000458013 SMIM2Q9BVW6 85 aa15.49■□□□□ 0.07
SNX27-204ENST00000458013 TRBV20-1A0A075B6N2 111 aa15.49■□□□□ 0.07
SNX27-204ENST00000458013 LMO1P25800 156 aa15.49■□□□□ 0.07
SNX27-204ENST00000458013 K7EM74 188 aa15.48■□□□□ 0.07
SNX27-204ENST00000458013 NCR3O14931 201 aa15.48■□□□□ 0.07
SNX27-204ENST00000458013 MRPL53Q96EL3 112 aaKnown RBP15.48■□□□□ 0.07
SNX27-204ENST00000458013 Q9H8V8 135 aa15.48■□□□□ 0.07
SNX27-204ENST00000458013 CCL25O15444 150 aa15.48■□□□□ 0.07
SNX27-204ENST00000458013 DAND5Q8N907 189 aa15.48■□□□□ 0.07
SNX27-204ENST00000458013 SS18L2Q9UHA2 77 aa15.48■□□□□ 0.07
SNX27-204ENST00000458013 NTN5Q8WTR8 489 aaPredicted RBP15.48■□□□□ 0.07
SNX27-204ENST00000458013 C20orf144Q9BQM9 153 aa15.48■□□□□ 0.07
SNX27-204ENST00000458013 C12orf74Q32Q52 190 aa15.47■□□□□ 0.07
SNX27-204ENST00000458013 LGALS9BQ3B8N2 356 aa15.47■□□□□ 0.07
SNX27-204ENST00000458013 LGALS9CQ6DKI2 356 aa15.47■□□□□ 0.07
SNX27-204ENST00000458013 F8W1H4 67 aa15.47■□□□□ 0.07
SNX27-204ENST00000458013 INAFM2P0DMQ5 153 aa15.47■□□□□ 0.07
SNX27-204ENST00000458013 BOD1L2Q8IYS8 172 aa15.47■□□□□ 0.07
SNX27-204ENST00000458013 MAP1BP46821 2468 aaKnown RBP15.47■□□□□ 0.07
SNX27-204ENST00000458013 HERVK_113P63121 156 aa15.47■□□□□ 0.07
SNX27-204ENST00000458013 HEATR1Q9H583 2144 aaKnown RBP15.47■□□□□ 0.07
SNX27-204ENST00000458013 IGLC1P0CG04 106 aa15.46■□□□□ 0.07
SNX27-204ENST00000458013 NBL1P41271 181 aa15.46■□□□□ 0.07
SNX27-204ENST00000458013 C1orf147Q96MC9 270 aaPredicted RBP15.46■□□□□ 0.07
SNX27-204ENST00000458013 DEFB4AO15263 64 aa15.46■□□□□ 0.07
SNX27-204ENST00000458013 LTAP01374 205 aa15.46■□□□□ 0.07
SNX27-204ENST00000458013 DOCK11Q5JSL3 2073 aa15.46■□□□□ 0.07
SNX27-204ENST00000458013 TSC2P49815 1807 aa15.46■□□□□ 0.06
SNX27-204ENST00000458013 THSD7BQ9C0I4 1608 aa15.45■□□□□ 0.06
SNX27-204ENST00000458013 GAGE12HA6NDE8 117 aa15.45■□□□□ 0.06
SNX27-204ENST00000458013 TRAV13-2A0A0B4J235 113 aa15.45■□□□□ 0.06
SNX27-204ENST00000458013 TMEM14CQ9P0S9 112 aa15.45■□□□□ 0.06
SNX27-204ENST00000458013 IGHV4-38-2P0DP08 117 aa15.45■□□□□ 0.06
SNX27-204ENST00000458013 RSPO1Q2MKA7 263 aaPredicted RBP15.44■□□□□ 0.06
SNX27-204ENST00000458013 CT83Q5H943 113 aa15.44■□□□□ 0.06
SNX27-204ENST00000458013 LINC00173Q6ZV60 143 aa15.44■□□□□ 0.06
SNX27-204ENST00000458013 ANKRD29Q8N6D5 301 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms