RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 DSCAMO60469 2012 aa10.97□□□□□ -0.65
SYT1-204ENST00000457153 C2orf70A6NJV1 201 aa10.96□□□□□ -0.65
SYT1-204ENST00000457153 VCYO14598 125 aa10.96□□□□□ -0.65
SYT1-204ENST00000457153 HLA-DMBP28068 263 aa10.96□□□□□ -0.65
SYT1-204ENST00000457153 CTRLP40313 264 aa10.96□□□□□ -0.65
SYT1-204ENST00000457153 C14orf178Q8N769 122 aaPredicted RBP10.96□□□□□ -0.65
SYT1-204ENST00000457153 SPOCK3Q9BQ16 436 aa10.96□□□□□ -0.65
SYT1-204ENST00000457153 TNFRSF18Q9Y5U5 241 aa10.96□□□□□ -0.65
SYT1-204ENST00000457153 C5orf42Q9H799 3197 aa10.96□□□□□ -0.65
SYT1-204ENST00000457153 OVOL3O00110 214 aa10.96□□□□□ -0.65
SYT1-204ENST00000457153 SPTAN1Q13813 2472 aaKnown RBP10.96□□□□□ -0.66
SYT1-204ENST00000457153 LDLRAD2Q5SZI1 272 aa10.96□□□□□ -0.66
SYT1-204ENST00000457153 BVES-AS1Q5T3Y7 98 aa10.96□□□□□ -0.66
SYT1-204ENST00000457153 EBI3Q14213 229 aa10.95□□□□□ -0.66
SYT1-204ENST00000457153 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
SYT1-204ENST00000457153 SAMD5Q5TGI4 173 aa10.95□□□□□ -0.66
SYT1-204ENST00000457153 LINC01356Q8N9X3 169 aa10.95□□□□□ -0.66
SYT1-204ENST00000457153 CACNA1BQ00975 2339 aa10.95□□□□□ -0.66
SYT1-204ENST00000457153 H3BRM9 83 aa10.95□□□□□ -0.66
SYT1-204ENST00000457153 ZFP36P26651 326 aaKnown RBP10.95□□□□□ -0.66
SYT1-204ENST00000457153 SUMO2P61956 95 aaKnown RBP10.95□□□□□ -0.66
SYT1-204ENST00000457153 ZNF256Q9Y2P7 627 aaPredicted RBP10.95□□□□□ -0.66
SYT1-204ENST00000457153 TMEM8BA6NDV4 472 aa10.94□□□□□ -0.66
SYT1-204ENST00000457153 MUC6Q6W4X9 2439 aa10.94□□□□□ -0.66
SYT1-204ENST00000457153 MRPL16Q9NX20 251 aaKnown RBP10.94□□□□□ -0.66
SYT1-204ENST00000457153 SRD5A1P18405 259 aa10.94□□□□□ -0.66
SYT1-204ENST00000457153 BRCA2P51587 3418 aa10.94□□□□□ -0.66
SYT1-204ENST00000457153 PCSK5Q92824 1860 aa10.94□□□□□ -0.66
SYT1-204ENST00000457153 K7EMI3 77 aa10.94□□□□□ -0.66
SYT1-204ENST00000457153 FCN3O75636 299 aa10.94□□□□□ -0.66
SYT1-204ENST00000457153 C21orf62-AS1Q17RA5 79 aa10.94□□□□□ -0.66
SYT1-204ENST00000457153 DUX3Q96PT4 197 aa10.94□□□□□ -0.66
SYT1-204ENST00000457153 C20orf78Q9BR46 151 aa10.94□□□□□ -0.66
SYT1-204ENST00000457153 LINC00173Q6ZV60 143 aa10.93□□□□□ -0.66
SYT1-204ENST00000457153 SPATA12Q7Z6I5 190 aa10.93□□□□□ -0.66
SYT1-204ENST00000457153 CSTL1Q9H114 145 aa10.93□□□□□ -0.66
SYT1-204ENST00000457153 CIDEAO60543 219 aa10.93□□□□□ -0.66
SYT1-204ENST00000457153 ZNF688P0C7X2 276 aa10.93□□□□□ -0.66
SYT1-204ENST00000457153 C5orf56Q8N8D9 126 aa10.93□□□□□ -0.66
SYT1-204ENST00000457153 CHAC1Q9BUX1 264 aa10.93□□□□□ -0.66
SYT1-204ENST00000457153 SMIM2Q9BVW6 85 aa10.93□□□□□ -0.66
SYT1-204ENST00000457153 PTPRQQ9UMZ3 2332 aa10.93□□□□□ -0.66
SYT1-204ENST00000457153 ZNF815PA8K554 130 aa10.93□□□□□ -0.66
SYT1-204ENST00000457153 COX6CP09669 75 aa10.92□□□□□ -0.66
SYT1-204ENST00000457153 IGHV7-4-1A0A0J9YVY3 117 aa10.92□□□□□ -0.66
SYT1-204ENST00000457153 VCX2Q9H322 139 aa10.92□□□□□ -0.66
SYT1-204ENST00000457153 SCRT2Q9NQ03 307 aa10.92□□□□□ -0.66
SYT1-204ENST00000457153 C16orf54Q6UWD8 224 aa10.92□□□□□ -0.66
SYT1-204ENST00000457153 DEFB125Q8N687 156 aa10.92□□□□□ -0.66
SYT1-204ENST00000457153 ZNF479Q96JC4 524 aa10.92□□□□□ -0.66
SYT1-204ENST00000457153 PLXNB1O43157 2135 aa10.92□□□□□ -0.66
SYT1-204ENST00000457153 TRAV12-3A0A0B4J271 114 aa10.91□□□□□ -0.66
SYT1-204ENST00000457153 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
SYT1-204ENST00000457153 C9orf47Q6ZRZ4 202 aa10.91□□□□□ -0.66
SYT1-204ENST00000457153 J3QLI3 93 aa10.91□□□□□ -0.66
SYT1-204ENST00000457153 HOXA3O43365 443 aaPredicted RBP10.91□□□□□ -0.66
SYT1-204ENST00000457153 RPL13AP40429 203 aaKnown RBP10.91□□□□□ -0.66
SYT1-204ENST00000457153 C11orf71Q6IPW1 123 aa10.91□□□□□ -0.66
SYT1-204ENST00000457153 ANXA2RQ3ZCQ2 193 aa10.91□□□□□ -0.66
SYT1-204ENST00000457153 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
SYT1-204ENST00000457153 COPS9Q8WXC6 57 aa10.91□□□□□ -0.66
SYT1-204ENST00000457153 C9orf118A6NHY6 69 aa10.9□□□□□ -0.66
SYT1-204ENST00000457153 C2orf66Q6UXQ4 117 aa10.9□□□□□ -0.66
SYT1-204ENST00000457153 GAGE12BA1L429 117 aa10.9□□□□□ -0.67
SYT1-204ENST00000457153 CIRBPQ14011 172 aaKnown RBP10.9□□□□□ -0.67
SYT1-204ENST00000457153 LINC00310P59036 64 aa10.89□□□□□ -0.67
SYT1-204ENST00000457153 ITLN2Q8WWU7 325 aaPredicted RBP10.89□□□□□ -0.67
SYT1-204ENST00000457153 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.89□□□□□ -0.67
SYT1-204ENST00000457153 CRXO43186 299 aaPredicted RBP10.89□□□□□ -0.67
SYT1-204ENST00000457153 IGLV2-11P01706 119 aa10.89□□□□□ -0.67
SYT1-204ENST00000457153 ARFGEF3Q5TH69 2177 aa10.89□□□□□ -0.67
SYT1-204ENST00000457153 IGHV4-39P01824 125 aa10.89□□□□□ -0.67
SYT1-204ENST00000457153 PRSS2P07478 247 aa10.89□□□□□ -0.67
SYT1-204ENST00000457153 F8VRH5 84 aa10.89□□□□□ -0.67
SYT1-204ENST00000457153 LINC01587Q99440 93 aa10.89□□□□□ -0.67
SYT1-204ENST00000457153 TANC2Q9HCD6 1990 aa10.88□□□□□ -0.67
SYT1-204ENST00000457153 TAL2Q16559 108 aa10.88□□□□□ -0.67
SYT1-204ENST00000457153 CD300EQ496F6 205 aaPredicted RBP10.88□□□□□ -0.67
SYT1-204ENST00000457153 NAV3Q8IVL0 2385 aa10.88□□□□□ -0.67
SYT1-204ENST00000457153 LMO4P61968 165 aa10.88□□□□□ -0.67
SYT1-204ENST00000457153 FOXE3Q13461 319 aa10.88□□□□□ -0.67
SYT1-204ENST00000457153 TMEM141Q96I45 108 aa10.88□□□□□ -0.67
SYT1-204ENST00000457153 JMJD8Q96S16 334 aa10.88□□□□□ -0.67
SYT1-204ENST00000457153 DKK2Q9UBU2 259 aa10.88□□□□□ -0.67
SYT1-204ENST00000457153 MRPL35Q9NZE8 188 aaKnown RBP10.87□□□□□ -0.67
SYT1-204ENST00000457153 A0A087WX48 190 aa10.87□□□□□ -0.67
SYT1-204ENST00000457153 PRAC2D3DTV9 90 aa10.87□□□□□ -0.67
SYT1-204ENST00000457153 Q8N6K4 173 aa10.87□□□□□ -0.67
SYT1-204ENST00000457153 MSRB1Q9NZV6 116 aa10.87□□□□□ -0.67
SYT1-204ENST00000457153 IGHV4-61A0A0C4DH41 118 aa10.87□□□□□ -0.67
SYT1-204ENST00000457153 APOMO95445 188 aa10.87□□□□□ -0.67
SYT1-204ENST00000457153 TRAV26-2A0A0B4J265 109 aa10.87□□□□□ -0.67
SYT1-204ENST00000457153 IGLC6P0CF74 106 aa10.87□□□□□ -0.67
SYT1-204ENST00000457153 C10orf105Q8TEF2 133 aa10.87□□□□□ -0.67
SYT1-204ENST00000457153 WFDC12Q8WWY7 111 aa10.87□□□□□ -0.67
SYT1-204ENST00000457153 HLA-DRB4P13762 266 aa10.86□□□□□ -0.67
SYT1-204ENST00000457153 TRPT1Q86TN4 253 aaKnown RBP10.86□□□□□ -0.67
SYT1-204ENST00000457153 HLA-DRB4X5D2U9 266 aa10.86□□□□□ -0.67
SYT1-204ENST00000457153 IGHV3OR16-12A0A075B7B8 117 aa10.86□□□□□ -0.67
SYT1-204ENST00000457153 A0A1B0GWB2 263 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms