RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 BTN1A1Q13410 526 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 RBMY1FQ15415 496 aaKnown RBP8.62□□□□□ -1.03
LINC00339-205ENST00000452322 TMEM183BQ1AE95 376 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 ZNF506Q5JVG8 444 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 SAPCD1Q5SSQ6 148 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 PRR9Q5T870 116 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 PRNTQ86SH4 94 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 Q86TA4 180 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 TVP23CQ96ET8 276 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 NEU1Q99519 415 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 TMEM208Q9BTX3 173 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 TREM1Q9NP99 234 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 U3KQK5 164 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 X6R8D5 127 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 TGP01266 2768 aa8.62□□□□□ -1.03
LINC00339-205ENST00000452322 TRAV12-3A0A0B4J271 114 aa8.61□□□□□ -1.03
LINC00339-205ENST00000452322 TOR2AQ5JU69 321 aa8.61□□□□□ -1.03
LINC00339-205ENST00000452322 NIPSNAP3BQ9BS92 247 aa8.61□□□□□ -1.03
LINC00339-205ENST00000452322 ZFP30Q9Y2G7 519 aa8.61□□□□□ -1.03
LINC00339-205ENST00000452322 IGHV3OR16-12A0A075B7B8 117 aa8.61□□□□□ -1.03
LINC00339-205ENST00000452322 SMIM9A6NGZ8 99 aa8.61□□□□□ -1.03
LINC00339-205ENST00000452322 H7BYZ3 331 aa8.61□□□□□ -1.03
LINC00339-205ENST00000452322 NDUFS6O75380 124 aaKnown RBP8.61□□□□□ -1.03
LINC00339-205ENST00000452322 ZNF324O75467 553 aaPredicted RBP8.61□□□□□ -1.03
LINC00339-205ENST00000452322 LTAP01374 205 aa8.61□□□□□ -1.03
LINC00339-205ENST00000452322 MIFP14174 115 aa8.61□□□□□ -1.03
LINC00339-205ENST00000452322 RNASE4P34096 147 aaKnown RBP8.61□□□□□ -1.03
LINC00339-205ENST00000452322 CLLU1Q5K131 121 aa8.61□□□□□ -1.03
LINC00339-205ENST00000452322 Q6AWC8 147 aa8.61□□□□□ -1.03
LINC00339-205ENST00000452322 EIF5A2Q9GZV4 153 aaKnown RBP8.61□□□□□ -1.03
LINC00339-205ENST00000452322 STAB2Q8WWQ8 2551 aa8.6□□□□□ -1.03
LINC00339-205ENST00000452322 TMEM250H0YL14 139 aa8.6□□□□□ -1.03
LINC00339-205ENST00000452322 RPL35P42766 123 aaKnown RBP8.6□□□□□ -1.03
LINC00339-205ENST00000452322 TAS2R60P59551 318 aa8.6□□□□□ -1.03
LINC00339-205ENST00000452322 SMUG1Q53HV7 270 aa8.6□□□□□ -1.03
LINC00339-205ENST00000452322 COX8CQ7Z4L0 72 aa8.6□□□□□ -1.03
LINC00339-205ENST00000452322 Q8NAQ8 132 aa8.6□□□□□ -1.03
LINC00339-205ENST00000452322 C8orf49Q96NF6 230 aa8.6□□□□□ -1.03
LINC00339-205ENST00000452322 LINC01587Q99440 93 aa8.6□□□□□ -1.03
LINC00339-205ENST00000452322 PYGO2Q9BRQ0 406 aa8.6□□□□□ -1.03
LINC00339-205ENST00000452322 MED9Q9NWA0 146 aa8.6□□□□□ -1.03
LINC00339-205ENST00000452322 TRAV21A0A0B4J279 112 aa8.59□□□□□ -1.03
LINC00339-205ENST00000452322 GCGP01275 180 aa8.59□□□□□ -1.03
LINC00339-205ENST00000452322 RRN3P1Q2M238 152 aa8.59□□□□□ -1.03
LINC00339-205ENST00000452322 TMEM183AQ8IXX5 376 aa8.59□□□□□ -1.03
LINC00339-205ENST00000452322 LINC00467Q9BRT7 94 aa8.59□□□□□ -1.03
LINC00339-205ENST00000452322 DERL1Q9BUN8 251 aa8.59□□□□□ -1.03
LINC00339-205ENST00000452322 C11orf68Q9H3H3 251 aaKnown RBP8.59□□□□□ -1.03
LINC00339-205ENST00000452322 IGHV4-28A0A0C4DH34 117 aa8.58□□□□□ -1.04
LINC00339-205ENST00000452322 RGS13O14921 159 aa8.58□□□□□ -1.04
LINC00339-205ENST00000452322 PFN1P07737 140 aaKnown RBP8.58□□□□□ -1.04
LINC00339-205ENST00000452322 BAGE2Q86Y30 109 aa8.58□□□□□ -1.04
LINC00339-205ENST00000452322 DNAH7Q8WXX0 4024 aa8.57□□□□□ -1.04
LINC00339-205ENST00000452322 TMEM189A5PLL7 270 aa8.57□□□□□ -1.04
LINC00339-205ENST00000452322 ZNF705GA8MUZ8 300 aaPredicted RBP8.57□□□□□ -1.04
LINC00339-205ENST00000452322 ZNF80P51504 273 aaPredicted RBP8.57□□□□□ -1.04
LINC00339-205ENST00000452322 CENPWQ5EE01 88 aa8.57□□□□□ -1.04
LINC00339-205ENST00000452322 Q6ZQT7 251 aa8.57□□□□□ -1.04
LINC00339-205ENST00000452322 SMIM12Q96EX1 92 aa8.57□□□□□ -1.04
LINC00339-205ENST00000452322 ZC2HC1AQ96GY0 325 aa8.57□□□□□ -1.04
LINC00339-205ENST00000452322 MLST8Q9BVC4 326 aa8.57□□□□□ -1.04
LINC00339-205ENST00000452322 SMDT1Q9H4I9 107 aa8.57□□□□□ -1.04
LINC00339-205ENST00000452322 EDA2RQ9HAV5 297 aa8.57□□□□□ -1.04
LINC00339-205ENST00000452322 IGHV1OR15-1A0A075B7D0 117 aa8.56□□□□□ -1.04
LINC00339-205ENST00000452322 A0A0J9YWU9 116 aa8.56□□□□□ -1.04
LINC00339-205ENST00000452322 SRP19P09132 144 aaKnown RBP8.56□□□□□ -1.04
LINC00339-205ENST00000452322 HTN1P15515 57 aa8.56□□□□□ -1.04
LINC00339-205ENST00000452322 GNG4P50150 75 aa8.56□□□□□ -1.04
LINC00339-205ENST00000452322 PEA15Q15121 130 aa8.56□□□□□ -1.04
LINC00339-205ENST00000452322 ANXA2RQ3ZCQ2 193 aa8.56□□□□□ -1.04
LINC00339-205ENST00000452322 ZNF493Q6ZR52 646 aa8.56□□□□□ -1.04
LINC00339-205ENST00000452322 EIF4E3Q8N5X7 224 aaKnown RBP8.56□□□□□ -1.04
LINC00339-205ENST00000452322 NHLRC2Q8NBF2 726 aa8.56□□□□□ -1.04
LINC00339-205ENST00000452322 TMEM263Q8WUH6 116 aaKnown RBP8.56□□□□□ -1.04
LINC00339-205ENST00000452322 C16orf74Q96GX8 76 aa8.56□□□□□ -1.04
LINC00339-205ENST00000452322 PARLQ9H300 379 aa8.56□□□□□ -1.04
LINC00339-205ENST00000452322 TRBV20OR9-2A0A075B6H5 130 aa8.55□□□□□ -1.04
LINC00339-205ENST00000452322 RAB19A4D1S5 217 aa8.55□□□□□ -1.04
LINC00339-205ENST00000452322 FABP5P3A8MUU1 101 aa8.55□□□□□ -1.04
LINC00339-205ENST00000452322 C9JCJ5 164 aa8.55□□□□□ -1.04
LINC00339-205ENST00000452322 DEFB4AO15263 64 aa8.55□□□□□ -1.04
LINC00339-205ENST00000452322 PRM2P04554 102 aa8.55□□□□□ -1.04
LINC00339-205ENST00000452322 AZU1P20160 251 aa8.55□□□□□ -1.04
LINC00339-205ENST00000452322 TDRG1Q3Y452 100 aa8.55□□□□□ -1.04
LINC00339-205ENST00000452322 MUC21Q5SSG8 566 aa8.55□□□□□ -1.04
LINC00339-205ENST00000452322 FAM159AQ6UWV7 190 aa8.55□□□□□ -1.04
LINC00339-205ENST00000452322 RNASE8Q8TDE3 154 aaKnown RBP8.55□□□□□ -1.04
LINC00339-205ENST00000452322 CBY3A6NI87 242 aa8.54□□□□□ -1.04
LINC00339-205ENST00000452322 IGLV2-8P01709 118 aa8.54□□□□□ -1.04
LINC00339-205ENST00000452322 CRIP1P50238 77 aa8.54□□□□□ -1.04
LINC00339-205ENST00000452322 CEBPGP53567 150 aa8.54□□□□□ -1.04
LINC00339-205ENST00000452322 SRSF3P84103 164 aaKnown RBP8.54□□□□□ -1.04
LINC00339-205ENST00000452322 ZNF674Q2M3X9 581 aa8.54□□□□□ -1.04
LINC00339-205ENST00000452322 FAM162BQ5T6X4 162 aa8.54□□□□□ -1.04
LINC00339-205ENST00000452322 KCNS1Q96KK3 526 aa8.54□□□□□ -1.04
LINC00339-205ENST00000452322 NAGKQ9UJ70 344 aa8.54□□□□□ -1.04
LINC00339-205ENST00000452322 TRGV11A0A075B6L2 103 aa8.53□□□□□ -1.04
LINC00339-205ENST00000452322 PLAC8L1A1L4L8 177 aa8.53□□□□□ -1.04
LINC00339-205ENST00000452322 C9JQL5 133 aa8.53□□□□□ -1.04
LINC00339-205ENST00000452322 SH2D1AO60880 128 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms