RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 PRR9Q5T870 116 aa15.24■□□□□ 0.03
CPSF7-208ENST00000450000 MRPL16Q9NX20 251 aaKnown RBP15.24■□□□□ 0.03
CPSF7-208ENST00000450000 TP53TG3Q9ULZ0 132 aa15.24■□□□□ 0.03
CPSF7-208ENST00000450000 FAT2Q9NYQ8 4349 aa15.24■□□□□ 0.03
CPSF7-208ENST00000450000 TNP2Q05952 138 aa15.23■□□□□ 0.03
CPSF7-208ENST00000450000 MUC21Q5SSG8 566 aa15.23■□□□□ 0.03
CPSF7-208ENST00000450000 FAM159AQ6UWV7 190 aa15.23■□□□□ 0.03
CPSF7-208ENST00000450000 ST6GAL2Q96JF0 529 aa15.23■□□□□ 0.03
CPSF7-208ENST00000450000 BATF3Q9NR55 127 aa15.23■□□□□ 0.03
CPSF7-208ENST00000450000 OTORQ9NRC9 128 aa15.23■□□□□ 0.03
CPSF7-208ENST00000450000 MRPS16Q9Y3D3 137 aaKnown RBP15.23■□□□□ 0.03
CPSF7-208ENST00000450000 DNAH17Q9UFH2 4485 aa15.23■□□□□ 0.03
CPSF7-208ENST00000450000 PGPA6NDG6 321 aa15.22■□□□□ 0.03
CPSF7-208ENST00000450000 DIRC3C9JPN6 131 aa15.22■□□□□ 0.03
CPSF7-208ENST00000450000 ZNF266Q14584 549 aa15.22■□□□□ 0.03
CPSF7-208ENST00000450000 ZNF575Q86XF7 245 aa15.22■□□□□ 0.03
CPSF7-208ENST00000450000 UPK3BQ9BT76 320 aa15.22■□□□□ 0.03
CPSF7-208ENST00000450000 LENEPQ9Y5L5 61 aa15.22■□□□□ 0.03
CPSF7-208ENST00000450000 ICOSQ9Y6W8 199 aa15.22■□□□□ 0.03
CPSF7-208ENST00000450000 PQLC2Q6ZP29 291 aa15.21■□□□□ 0.03
CPSF7-208ENST00000450000 NAGKQ9UJ70 344 aa15.21■□□□□ 0.03
CPSF7-208ENST00000450000 HERC2O95714 4834 aa15.2■□□□□ 0.02
CPSF7-208ENST00000450000 TRGV11A0A075B6L2 103 aa15.2■□□□□ 0.02
CPSF7-208ENST00000450000 A0A096LPF7 62 aa15.2■□□□□ 0.02
CPSF7-208ENST00000450000 C16orf90A8MZG2 172 aa15.2■□□□□ 0.02
CPSF7-208ENST00000450000 VSIG2Q96IQ7 327 aa15.2■□□□□ 0.02
CPSF7-208ENST00000450000 PRO0255Q9UI72 69 aa15.2■□□□□ 0.02
CPSF7-208ENST00000450000 TRGV4A0A0C4DH28 118 aa15.19■□□□□ 0.02
CPSF7-208ENST00000450000 A0A1W2PPQ1 181 aa15.19■□□□□ 0.02
CPSF7-208ENST00000450000 EIF3GO75821 320 aaKnown RBP eCLIP15.19■□□□□ 0.02
CPSF7-208ENST00000450000 Q6ZQT7 251 aa15.19■□□□□ 0.02
CPSF7-208ENST00000450000 OR10G4Q8NGN3 311 aa15.19■□□□□ 0.02
CPSF7-208ENST00000450000 OR10G9Q8NGN4 311 aa15.19■□□□□ 0.02
CPSF7-208ENST00000450000 OR10G7Q8NGN6 311 aa15.19■□□□□ 0.02
CPSF7-208ENST00000450000 WFDC1Q9HC57 220 aa15.19■□□□□ 0.02
CPSF7-208ENST00000450000 HHLA3Q9XRX5 114 aa15.19■□□□□ 0.02
CPSF7-208ENST00000450000 ALG5Q9Y673 324 aa15.19■□□□□ 0.02
CPSF7-208ENST00000450000 TMEM183BQ1AE95 376 aa15.18■□□□□ 0.02
CPSF7-208ENST00000450000 TMEM183AQ8IXX5 376 aa15.18■□□□□ 0.02
CPSF7-208ENST00000450000 TMED6Q8WW62 240 aa15.18■□□□□ 0.02
CPSF7-208ENST00000450000 MED28Q9H204 178 aa15.18■□□□□ 0.02
CPSF7-208ENST00000450000 RAB2AP61019 212 aa15.17■□□□□ 0.02
CPSF7-208ENST00000450000 MRPL23Q16540 153 aaKnown RBP15.17■□□□□ 0.02
CPSF7-208ENST00000450000 GOLT1AQ6ZVE7 132 aa15.17■□□□□ 0.02
CPSF7-208ENST00000450000 PCNPQ8WW12 178 aaKnown RBP15.17■□□□□ 0.02
CPSF7-208ENST00000450000 C8orf49Q96NF6 230 aa15.17■□□□□ 0.02
CPSF7-208ENST00000450000 SPXQ9BT56 116 aa15.17■□□□□ 0.02
CPSF7-208ENST00000450000 HMGB3O15347 200 aaKnown RBP15.16■□□□□ 0.02
CPSF7-208ENST00000450000 Q6AWC8 147 aa15.16■□□□□ 0.02
CPSF7-208ENST00000450000 NDFIP1Q9BT67 221 aa15.16■□□□□ 0.02
CPSF7-208ENST00000450000 KRTAP17-1Q9BYP8 105 aa15.16■□□□□ 0.02
CPSF7-208ENST00000450000 MDFICQ9P1T7 246 aa15.16■□□□□ 0.02
CPSF7-208ENST00000450000 SIVA1O15304 175 aa15.15■□□□□ 0.02
CPSF7-208ENST00000450000 BTF3P20290 206 aaKnown RBP15.15■□□□□ 0.02
CPSF7-208ENST00000450000 CDC34P49427 236 aaPredicted RBP15.15■□□□□ 0.02
CPSF7-208ENST00000450000 HSD17B11Q8NBQ5 300 aa15.15■□□□□ 0.02
CPSF7-208ENST00000450000 TREM1Q9NP99 234 aa15.15■□□□□ 0.02
CPSF7-208ENST00000450000 TRAV21A0A0B4J279 112 aa15.14■□□□□ 0.01
CPSF7-208ENST00000450000 K7EQM0 130 aa15.14■□□□□ 0.01
CPSF7-208ENST00000450000 CRYBA4P53673 196 aa15.14■□□□□ 0.01
CPSF7-208ENST00000450000 ARL6IP6Q8N6S5 226 aa15.14■□□□□ 0.01
CPSF7-208ENST00000450000 KIAA1109Q2LD37 5005 aa15.13■□□□□ 0.01
CPSF7-208ENST00000450000 PTTG1O95997 202 aa15.13■□□□□ 0.01
CPSF7-208ENST00000450000 MBP02144 154 aa15.13■□□□□ 0.01
CPSF7-208ENST00000450000 NXPH4O95158 308 aa15.12■□□□□ 0.01
CPSF7-208ENST00000450000 ARL14EPLP0DKL9 152 aa15.12■□□□□ 0.01
CPSF7-208ENST00000450000 SRIP30626 198 aa15.12■□□□□ 0.01
CPSF7-208ENST00000450000 FHL2Q14192 279 aa15.12■□□□□ 0.01
CPSF7-208ENST00000450000 NEGR1Q7Z3B1 354 aa15.12■□□□□ 0.01
CPSF7-208ENST00000450000 SDF2L1Q9HCN8 221 aa15.12■□□□□ 0.01
CPSF7-208ENST00000450000 SERTM2A0A1B0GWG4 89 aa15.11■□□□□ 0.01
CPSF7-208ENST00000450000 F6UZH7 168 aa15.11■□□□□ 0.01
CPSF7-208ENST00000450000 SFTA3P0C7M3 94 aa15.11■□□□□ 0.01
CPSF7-208ENST00000450000 SPATA12Q7Z6I5 190 aa15.11■□□□□ 0.01
CPSF7-208ENST00000450000 INO80EQ8NBZ0 244 aaPredicted RBP15.11■□□□□ 0.01
CPSF7-208ENST00000450000 OR4C5Q8NGB2 326 aa15.11■□□□□ 0.01
CPSF7-208ENST00000450000 RASL10AQ92737 203 aa15.11■□□□□ 0.01
CPSF7-208ENST00000450000 KCNS1Q96KK3 526 aa15.11■□□□□ 0.01
CPSF7-208ENST00000450000 KRTAP1-5Q9BYS1 174 aa15.11■□□□□ 0.01
CPSF7-208ENST00000450000 DNAH11Q96DT5 4516 aa15.1■□□□□ 0.01
CPSF7-208ENST00000450000 TRAV9-2A0A087WT02 112 aa15.1■□□□□ 0.01
CPSF7-208ENST00000450000 ORM1P02763 201 aa15.1■□□□□ 0.01
CPSF7-208ENST00000450000 GNG5P63218 68 aa15.1■□□□□ 0.01
CPSF7-208ENST00000450000 IQCF2Q8IXL9 164 aa15.1■□□□□ 0.01
CPSF7-208ENST00000450000 ZNF479Q96JC4 524 aa15.1■□□□□ 0.01
CPSF7-208ENST00000450000 PSMG3Q9BT73 122 aaPredicted RBP15.1■□□□□ 0.01
CPSF7-208ENST00000450000 PKHD1P08F94 4074 aa15.09■□□□□ 0.01
CPSF7-208ENST00000450000 TRAV8-1A0A0A6YYK1 113 aa15.09■□□□□ 0.01
CPSF7-208ENST00000450000 M0R2P5 195 aa15.09■□□□□ 0.01
CPSF7-208ENST00000450000 GNRH2O43555 120 aa15.09■□□□□ 0.01
CPSF7-208ENST00000450000 SERF2P84101 59 aa15.09■□□□□ 0.01
CPSF7-208ENST00000450000 OR2G3Q8NGZ4 309 aa15.09■□□□□ 0.01
CPSF7-208ENST00000450000 RAB24Q969Q5 203 aa15.09■□□□□ 0.01
CPSF7-208ENST00000450000 AQP10Q96PS8 301 aa15.09■□□□□ 0.01
CPSF7-208ENST00000450000 ACTR3CQ9C0K3 210 aaPredicted RBP15.09■□□□□ 0.01
CPSF7-208ENST00000450000 C9JCJ5 164 aa15.08■□□□□ 0
CPSF7-208ENST00000450000 EREGO14944 169 aa15.08■□□□□ 0
CPSF7-208ENST00000450000 STAG3L2P0CL84 134 aa15.08■□□□□ 0
CPSF7-208ENST00000450000 STAG3L3P0CL85 134 aa15.08■□□□□ 0
CPSF7-208ENST00000450000 GYPEP15421 78 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms