RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ERCC8Q13216 396 aa8.01□□□□□ -1.13
VIPAS39-203ENST00000448935 DPF1Q92782 380 aa8.01□□□□□ -1.13
VIPAS39-203ENST00000448935 TMEM18Q96B42 140 aa8.01□□□□□ -1.13
VIPAS39-203ENST00000448935 ITPR3Q14573 2671 aa8.01□□□□□ -1.13
VIPAS39-203ENST00000448935 LINC01619G3V211 115 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 FRMD6-AS1P0C7T7 363 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 CAMPP49913 170 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 SYNJ2BPP57105 145 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 MAP1AP78559 2803 aaPredicted RBP8□□□□□ -1.13
VIPAS39-203ENST00000448935 PEMTQ9UBM1 199 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 GZMBP10144 247 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 FABP4P15090 132 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 PAFAH1B2P68402 229 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 KLF5Q13887 457 aaPredicted RBP8□□□□□ -1.13
VIPAS39-203ENST00000448935 PDZD11Q5EBL8 140 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 GFI1BQ5VTD9 330 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 BAGE3Q86Y29 109 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 C12orf57Q99622 126 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 C16orf95Q9H693 158 aa8□□□□□ -1.13
VIPAS39-203ENST00000448935 SVEP1Q4LDE5 3571 aa7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 CSMD1Q96PZ7 3565 aa7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 PDZD2O15018 2839 aa7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 IFITM10A6NMD0 228 aa7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 ORM1P02763 201 aa7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 PRB4P10163 310 aaPredicted RBP7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 ESDP10768 282 aa7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 ZNF80P51504 273 aaPredicted RBP7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 SNRPD3P62318 126 aaKnown RBP7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 KHDC1LQ5JSQ8 128 aa7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 Q71RC1 249 aaPredicted RBP7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 GATD1Q8NB37 220 aa7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 C20orf173Q96LM9 149 aa7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 HIST1H2BLQ99880 126 aa7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 ESM1Q9NQ30 184 aa7.99□□□□□ -1.13
VIPAS39-203ENST00000448935 ITPR2Q14571 2701 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 IGKV3-7A0A075B6H7 116 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 GRIFINA4D1Z8 144 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 C2orf70A6NJV1 201 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 F2Z2F3 143 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 SRIP30626 198 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 HILS1P60008 231 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 SLAQ13239 276 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 FER1L6-AS1Q8NA97 138 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 KLHL30-AS1Q8NEE0 82 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 OR11H1Q8NG94 326 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 OR8A1Q8NGG7 326 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 OR10D4PQ8NGN7 298 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 OR1N2Q8NGR9 330 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 DCANP1Q8TF63 244 aa7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 PACRGQ96M98 296 aaPredicted RBP7.98□□□□□ -1.13
VIPAS39-203ENST00000448935 ZANQ9Y493 2812 aa7.97□□□□□ -1.13
VIPAS39-203ENST00000448935 AMBPP02760 352 aa7.97□□□□□ -1.13
VIPAS39-203ENST00000448935 CTRLP40313 264 aa7.97□□□□□ -1.13
VIPAS39-203ENST00000448935 KIAA1644Q3SXP7 199 aa7.97□□□□□ -1.13
VIPAS39-203ENST00000448935 GDF5OSQ5U4N7 250 aa7.97□□□□□ -1.13
VIPAS39-203ENST00000448935 MS4A6AQ9H2W1 248 aa7.97□□□□□ -1.13
VIPAS39-203ENST00000448935 TMSB15BA0A087X1C1 80 aa7.96□□□□□ -1.13
VIPAS39-203ENST00000448935 TRAV2A0A0B4J234 112 aa7.96□□□□□ -1.13
VIPAS39-203ENST00000448935 K7EQG2 157 aa7.96□□□□□ -1.13
VIPAS39-203ENST00000448935 ARMS2P0C7Q2 107 aa7.96□□□□□ -1.13
VIPAS39-203ENST00000448935 IGLC6P0CF74 106 aa7.96□□□□□ -1.13
VIPAS39-203ENST00000448935 TCTEX1D4Q5JR98 221 aa7.96□□□□□ -1.13
VIPAS39-203ENST00000448935 LYZL1Q6UWQ5 148 aa7.96□□□□□ -1.13
VIPAS39-203ENST00000448935 TPPP3Q9BW30 176 aa7.96□□□□□ -1.13
VIPAS39-203ENST00000448935 TRAV21A0A0B4J279 112 aa7.96□□□□□ -1.14
VIPAS39-203ENST00000448935 NDUFA7O95182 113 aa7.96□□□□□ -1.14
VIPAS39-203ENST00000448935 SLURP1P55000 103 aa7.96□□□□□ -1.14
VIPAS39-203ENST00000448935 DNLZQ5SXM8 178 aa7.96□□□□□ -1.14
VIPAS39-203ENST00000448935 ZNF493Q6ZR52 646 aa7.96□□□□□ -1.14
VIPAS39-203ENST00000448935 WFDC3Q8IUB2 231 aa7.96□□□□□ -1.14
VIPAS39-203ENST00000448935 TMEM256Q8N2U0 113 aa7.96□□□□□ -1.14
VIPAS39-203ENST00000448935 OR9G4Q8NGQ1 327 aa7.96□□□□□ -1.14
VIPAS39-203ENST00000448935 ALKBH7Q9BT30 221 aaPredicted RBP7.96□□□□□ -1.14
VIPAS39-203ENST00000448935 LOC102724200A0A096LPH7 203 aaPredicted RBP7.95□□□□□ -1.14
VIPAS39-203ENST00000448935 SERF1AO75920 110 aa7.95□□□□□ -1.14
VIPAS39-203ENST00000448935 DUSP14O95147 198 aaKnown RBP7.95□□□□□ -1.14
VIPAS39-203ENST00000448935 GPX1P07203 203 aa7.95□□□□□ -1.14
VIPAS39-203ENST00000448935 EDN2P20800 178 aa7.95□□□□□ -1.14
VIPAS39-203ENST00000448935 APRG1Q8IVJ8 170 aa7.95□□□□□ -1.14
VIPAS39-203ENST00000448935 C18orf32Q8TCD1 76 aa7.95□□□□□ -1.14
VIPAS39-203ENST00000448935 FAM19A4Q96LR4 140 aa7.95□□□□□ -1.14
VIPAS39-203ENST00000448935 ODF3Q96PU9 254 aa7.95□□□□□ -1.14
VIPAS39-203ENST00000448935 TSSC4Q9Y5U2 329 aaPredicted RBP7.95□□□□□ -1.14
VIPAS39-203ENST00000448935 FLNAP21333 2647 aaKnown RBP7.95□□□□□ -1.14
VIPAS39-203ENST00000448935 LY6G6DO95868 133 aa7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 ZNF705DP0CH99 300 aaPredicted RBP7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 ZNF705BP0CI00 300 aaPredicted RBP7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 LEPP41159 167 aa7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 DEFB136Q30KP8 78 aa7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 EBLN2Q6P2I7 272 aa7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 ZFAND2AQ8N6M9 145 aa7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 LINC01006Q8NI28 216 aa7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 KCNS1Q96KK3 526 aa7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 CNFNQ9BYD5 112 aa7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 SAMD10Q9BYL1 202 aa7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 TP53TG3Q9ULZ0 132 aa7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 CCDC168Q8NDH2 2452 aa7.94□□□□□ -1.14
VIPAS39-203ENST00000448935 NBPF19A0A087WUL8 3843 aa7.93□□□□□ -1.14
VIPAS39-203ENST00000448935 TFPI2P48307 235 aa7.93□□□□□ -1.14
VIPAS39-203ENST00000448935 PSMG4Q5JS54 123 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms