RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 FOXC1Q12948 553 aa10.5□□□□□ -0.73
POLR1B-209ENST00000448770 AGPAT4-IT1Q9H0P7 198 aa10.5□□□□□ -0.73
POLR1B-209ENST00000448770 ATRXP46100 2492 aa10.5□□□□□ -0.73
POLR1B-209ENST00000448770 IGHV7-4-1A0A0J9YVY3 117 aa10.5□□□□□ -0.73
POLR1B-209ENST00000448770 G3V318 75 aa10.5□□□□□ -0.73
POLR1B-209ENST00000448770 CCL21O00585 134 aa10.5□□□□□ -0.73
POLR1B-209ENST00000448770 ATP6V0E1O15342 81 aa10.5□□□□□ -0.73
POLR1B-209ENST00000448770 CLEC3BP05452 202 aa10.5□□□□□ -0.73
POLR1B-209ENST00000448770 SRSF2Q01130 221 aaKnown RBP10.5□□□□□ -0.73
POLR1B-209ENST00000448770 S100A7AQ86SG5 101 aa10.5□□□□□ -0.73
POLR1B-209ENST00000448770 OR4X2Q8NGF9 303 aa10.5□□□□□ -0.73
POLR1B-209ENST00000448770 ADORA2A-AS1P86434 159 aa10.49□□□□□ -0.73
POLR1B-209ENST00000448770 COTL1Q14019 142 aa10.49□□□□□ -0.73
POLR1B-209ENST00000448770 FBXL19-AS1Q494R0 122 aa10.49□□□□□ -0.73
POLR1B-209ENST00000448770 GTSCR1Q86UQ5 136 aa10.49□□□□□ -0.73
POLR1B-209ENST00000448770 FOXC2Q99958 501 aa10.49□□□□□ -0.73
POLR1B-209ENST00000448770 SPRY2O43597 315 aa10.49□□□□□ -0.73
POLR1B-209ENST00000448770 RIPPLY3P57055 190 aa10.49□□□□□ -0.73
POLR1B-209ENST00000448770 OR2K2Q8NGT1 345 aa10.49□□□□□ -0.73
POLR1B-209ENST00000448770 A0A1W2PPM0 123 aa10.48□□□□□ -0.73
POLR1B-209ENST00000448770 K7ENP7 123 aa10.48□□□□□ -0.73
POLR1B-209ENST00000448770 PRR9Q5T870 116 aa10.48□□□□□ -0.73
POLR1B-209ENST00000448770 NRACQ8N912 160 aa10.48□□□□□ -0.73
POLR1B-209ENST00000448770 TIMD4Q96H15 378 aa10.48□□□□□ -0.73
POLR1B-209ENST00000448770 CLEC19AQ6UXS0 136 aa10.48□□□□□ -0.73
POLR1B-209ENST00000448770 SIRPDQ9H106 197 aa10.48□□□□□ -0.73
POLR1B-209ENST00000448770 IGF1P05019 195 aa10.47□□□□□ -0.73
POLR1B-209ENST00000448770 PRSS1P07477 247 aa10.47□□□□□ -0.73
POLR1B-209ENST00000448770 GCSHP23434 173 aa10.47□□□□□ -0.73
POLR1B-209ENST00000448770 MAPKAPK5-AS1Q8N8E1 139 aa10.47□□□□□ -0.73
POLR1B-209ENST00000448770 FAM110DQ8TAY7 271 aaPredicted RBP10.47□□□□□ -0.73
POLR1B-209ENST00000448770 PIFOQ8TCI5 191 aa10.47□□□□□ -0.73
POLR1B-209ENST00000448770 PHLDA1Q8WV24 401 aaPredicted RBP10.47□□□□□ -0.73
POLR1B-209ENST00000448770 CCDC144NLQ6NUI1 221 aa10.47□□□□□ -0.73
POLR1B-209ENST00000448770 CHAC1Q9BUX1 264 aa10.47□□□□□ -0.73
POLR1B-209ENST00000448770 SPCS1Q9Y6A9 102 aa10.47□□□□□ -0.73
POLR1B-209ENST00000448770 TRBV25-1A0A075B6N4 114 aa10.46□□□□□ -0.73
POLR1B-209ENST00000448770 TMEM8BA6NDV4 472 aa10.46□□□□□ -0.73
POLR1B-209ENST00000448770 K7ERU9 68 aa10.46□□□□□ -0.73
POLR1B-209ENST00000448770 IGKCP01834 107 aa10.46□□□□□ -0.73
POLR1B-209ENST00000448770 ZC2HC1BQ5TFG8 222 aa10.46□□□□□ -0.73
POLR1B-209ENST00000448770 GTF2H5Q6ZYL4 71 aa10.46□□□□□ -0.73
POLR1B-209ENST00000448770 NEGR1Q7Z3B1 354 aa10.46□□□□□ -0.73
POLR1B-209ENST00000448770 Q8N8P6 123 aa10.46□□□□□ -0.73
POLR1B-209ENST00000448770 AP1S3Q96PC3 154 aa10.46□□□□□ -0.73
POLR1B-209ENST00000448770 CSTL1Q9H114 145 aa10.46□□□□□ -0.73
POLR1B-209ENST00000448770 NXT2Q9NPJ8 142 aaKnown RBP10.46□□□□□ -0.73
POLR1B-209ENST00000448770 MRPL35Q9NZE8 188 aaKnown RBP10.46□□□□□ -0.73
POLR1B-209ENST00000448770 EFNA4P52798 201 aa10.46□□□□□ -0.74
POLR1B-209ENST00000448770 IGF2RP11717 2491 aa10.46□□□□□ -0.74
POLR1B-209ENST00000448770 TRAV40A0A0B4J280 105 aa10.45□□□□□ -0.74
POLR1B-209ENST00000448770 SMIM17P0DL12 118 aa10.45□□□□□ -0.74
POLR1B-209ENST00000448770 DEFB1P60022 68 aa10.45□□□□□ -0.74
POLR1B-209ENST00000448770 MINOS1Q5TGZ0 78 aa10.45□□□□□ -0.74
POLR1B-209ENST00000448770 C8orf86Q6ZUL3 223 aa10.45□□□□□ -0.74
POLR1B-209ENST00000448770 MINOS1-NBL1R4GNA1 71 aa10.45□□□□□ -0.74
POLR1B-209ENST00000448770 RBAKDNA6NC62 111 aa10.44□□□□□ -0.74
POLR1B-209ENST00000448770 TMEM160Q9NX00 188 aa10.44□□□□□ -0.74
POLR1B-209ENST00000448770 UFC1Q9Y3C8 167 aa10.44□□□□□ -0.74
POLR1B-209ENST00000448770 G3V4G9 280 aa10.44□□□□□ -0.74
POLR1B-209ENST00000448770 C20orf173Q96LM9 149 aa10.44□□□□□ -0.74
POLR1B-209ENST00000448770 HIGD1BQ9P298 99 aa10.44□□□□□ -0.74
POLR1B-209ENST00000448770 OOSP1A8MZH6 123 aa10.43□□□□□ -0.74
POLR1B-209ENST00000448770 DPM2O94777 84 aa10.43□□□□□ -0.74
POLR1B-209ENST00000448770 SAA4P35542 130 aa10.43□□□□□ -0.74
POLR1B-209ENST00000448770 SAMD5Q5TGI4 173 aa10.43□□□□□ -0.74
POLR1B-209ENST00000448770 C1orf122Q6ZSJ8 110 aa10.43□□□□□ -0.74
POLR1B-209ENST00000448770 KLK9Q2XQG4 91 aa10.43□□□□□ -0.74
POLR1B-209ENST00000448770 SLC50A1Q9BRV3 221 aa10.43□□□□□ -0.74
POLR1B-209ENST00000448770 LINC00527Q9UJ94 153 aa10.43□□□□□ -0.74
POLR1B-209ENST00000448770 KLK9Q9UKQ9 250 aa10.43□□□□□ -0.74
POLR1B-209ENST00000448770 H3BVH4 76 aa10.42□□□□□ -0.74
POLR1B-209ENST00000448770 J3KRW8 73 aa10.42□□□□□ -0.74
POLR1B-209ENST00000448770 AKAP6Q13023 2319 aa10.42□□□□□ -0.74
POLR1B-209ENST00000448770 SMIM13P0DJ93 91 aa10.42□□□□□ -0.74
POLR1B-209ENST00000448770 SMIM15Q7Z3B0 74 aa10.42□□□□□ -0.74
POLR1B-209ENST00000448770 NHP2Q9NX24 153 aaKnown RBP10.42□□□□□ -0.74
POLR1B-209ENST00000448770 U3KQE9 123 aa10.41□□□□□ -0.74
POLR1B-209ENST00000448770 GOSR1O95249 250 aa10.41□□□□□ -0.74
POLR1B-209ENST00000448770 LAGE3Q14657 143 aa10.41□□□□□ -0.74
POLR1B-209ENST00000448770 TMEM78Q5T7P6 136 aa10.41□□□□□ -0.74
POLR1B-209ENST00000448770 TMEM219Q86XT9 240 aa10.41□□□□□ -0.74
POLR1B-209ENST00000448770 GPHB5Q86YW7 130 aa10.41□□□□□ -0.74
POLR1B-209ENST00000448770 AGRNO00468 2067 aa10.4□□□□□ -0.74
POLR1B-209ENST00000448770 PRSS47A8MTI9 375 aa10.4□□□□□ -0.74
POLR1B-209ENST00000448770 SCGB2A1O75556 95 aa10.4□□□□□ -0.74
POLR1B-209ENST00000448770 ATP5LO75964 103 aa10.4□□□□□ -0.74
POLR1B-209ENST00000448770 FABP2P12104 132 aa10.4□□□□□ -0.74
POLR1B-209ENST00000448770 C9orf47Q6ZRZ4 202 aa10.4□□□□□ -0.74
POLR1B-209ENST00000448770 CEND1Q8N111 149 aa10.4□□□□□ -0.74
POLR1B-209ENST00000448770 TM2D2Q9BX73 214 aa10.4□□□□□ -0.74
POLR1B-209ENST00000448770 RNF223E7ERA6 249 aa10.4□□□□□ -0.75
POLR1B-209ENST00000448770 TRBV12-3P01733 135 aa10.4□□□□□ -0.75
POLR1B-209ENST00000448770 OR5A1Q8NGJ0 315 aa10.4□□□□□ -0.75
POLR1B-209ENST00000448770 SPTBN1Q01082 2364 aaKnown RBP10.4□□□□□ -0.75
POLR1B-209ENST00000448770 COL6A6A6NMZ7 2263 aa10.39□□□□□ -0.75
POLR1B-209ENST00000448770 A0A087WX48 190 aa10.39□□□□□ -0.75
POLR1B-209ENST00000448770 CENPVL3A0A0U1RRI6 287 aa10.39□□□□□ -0.75
POLR1B-209ENST00000448770 KLK15Q9H2R5 256 aa10.39□□□□□ -0.75
POLR1B-209ENST00000448770 IGHV4-4A0A075B6R2 117 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms