RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 NKX6-2Q9C056 277 aaPredicted RBP9.89□□□□□ -0.83
PDLIM2-213ENST00000448520 X6R8D5 127 aa9.89□□□□□ -0.83
PDLIM2-213ENST00000448520 J3KRW8 73 aa9.88□□□□□ -0.83
PDLIM2-213ENST00000448520 DUSP14O95147 198 aaKnown RBP9.88□□□□□ -0.83
PDLIM2-213ENST00000448520 SRP19P09132 144 aaKnown RBP9.88□□□□□ -0.83
PDLIM2-213ENST00000448520 SPINK13Q1W4C9 94 aa9.88□□□□□ -0.83
PDLIM2-213ENST00000448520 C9orf47Q6ZRZ4 202 aa9.88□□□□□ -0.83
PDLIM2-213ENST00000448520 LINC00336Q6ZUF6 198 aa9.88□□□□□ -0.83
PDLIM2-213ENST00000448520 C11orf52Q96A22 123 aa9.88□□□□□ -0.83
PDLIM2-213ENST00000448520 TVP23CQ96ET8 276 aa9.88□□□□□ -0.83
PDLIM2-213ENST00000448520 IGHV4-4A0A075B6R2 117 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 RBAKDNA6NC62 111 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 A8MTW9 85 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 M0R2Z0 102 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 CEBPGP53567 150 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 Q6ZTC4 211 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 PRNTQ86SH4 94 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 COMMD7Q86VX2 200 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 HIST1H2BAQ96A08 127 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 C8orf49Q96NF6 230 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 MED9Q9NWA0 146 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 ZNF492Q9P255 531 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 PSG8Q9UQ74 426 aa9.87□□□□□ -0.83
PDLIM2-213ENST00000448520 TRAV12-2A0A075B6T6 113 aa9.86□□□□□ -0.83
PDLIM2-213ENST00000448520 RAB19A4D1S5 217 aa9.86□□□□□ -0.83
PDLIM2-213ENST00000448520 F6UZH7 168 aa9.86□□□□□ -0.83
PDLIM2-213ENST00000448520 TAGLN2P37802 199 aaKnown RBP9.86□□□□□ -0.83
PDLIM2-213ENST00000448520 ZNF138P52744 262 aa9.86□□□□□ -0.83
PDLIM2-213ENST00000448520 FLI1Q01543 452 aaPredicted RBP9.86□□□□□ -0.83
PDLIM2-213ENST00000448520 TMEM78Q5T7P6 136 aa9.86□□□□□ -0.83
PDLIM2-213ENST00000448520 PRR9Q5T870 116 aa9.86□□□□□ -0.83
PDLIM2-213ENST00000448520 Q86TA4 180 aa9.86□□□□□ -0.83
PDLIM2-213ENST00000448520 ARL6IP6Q8N6S5 226 aa9.86□□□□□ -0.83
PDLIM2-213ENST00000448520 HECTD4Q9Y4D8 3996 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 DEFB131BA0A096LNP1 70 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 K7EQM0 130 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 PDE6DO43924 150 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 P0DMU3 169 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 FAM231AP0DMU4 169 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 FAM231CP0DMU5 169 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 RPL35P42766 123 aaKnown RBP9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 TMEM183BQ1AE95 376 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 C12orf74Q32Q52 190 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 Q6ZQT7 251 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 ZFAND2AQ8N6M9 145 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 TMEM75Q8N9X5 138 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 NHLRC2Q8NBF2 726 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 FAM19A4Q96LR4 140 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 LINC00477Q96M19 166 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 TXNDC17Q9BRA2 123 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 TREM1Q9NP99 234 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 PPP1R14DQ9NXH3 145 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
PDLIM2-213ENST00000448520 SERTM2A0A1B0GWG4 89 aa9.84□□□□□ -0.83
PDLIM2-213ENST00000448520 LINC00862A6NCI5 91 aa9.84□□□□□ -0.83
PDLIM2-213ENST00000448520 PGPEP1LA6NFU8 196 aa9.84□□□□□ -0.83
PDLIM2-213ENST00000448520 UBE2G1P62253 170 aa9.84□□□□□ -0.83
PDLIM2-213ENST00000448520 PEA15Q15121 130 aa9.84□□□□□ -0.83
PDLIM2-213ENST00000448520 ZNF674Q2M3X9 581 aa9.84□□□□□ -0.83
PDLIM2-213ENST00000448520 CLUHP3Q96NS8 147 aa9.84□□□□□ -0.83
PDLIM2-213ENST00000448520 NEU1Q99519 415 aa9.84□□□□□ -0.83
PDLIM2-213ENST00000448520 TCEAL7Q9BRU2 100 aa9.84□□□□□ -0.83
PDLIM2-213ENST00000448520 PARLQ9H300 379 aa9.84□□□□□ -0.83
PDLIM2-213ENST00000448520 KLF12Q9Y4X4 402 aa9.84□□□□□ -0.83
PDLIM2-213ENST00000448520 TRBV20OR9-2A0A075B6H5 130 aa9.83□□□□□ -0.84
PDLIM2-213ENST00000448520 SMIM9A6NGZ8 99 aa9.83□□□□□ -0.84
PDLIM2-213ENST00000448520 CRXO43186 299 aaPredicted RBP9.83□□□□□ -0.84
PDLIM2-213ENST00000448520 AMBPP02760 352 aa9.83□□□□□ -0.84
PDLIM2-213ENST00000448520 BTN1A1Q13410 526 aa9.83□□□□□ -0.84
PDLIM2-213ENST00000448520 CENPWQ5EE01 88 aa9.83□□□□□ -0.84
PDLIM2-213ENST00000448520 POM121L12Q8N7R1 296 aa9.83□□□□□ -0.84
PDLIM2-213ENST00000448520 FMC1Q96HJ9 113 aa9.83□□□□□ -0.84
PDLIM2-213ENST00000448520 IGF2BP2-AS1Q96M15 143 aa9.83□□□□□ -0.84
PDLIM2-213ENST00000448520 NDUFAF3Q9BU61 184 aa9.83□□□□□ -0.84
PDLIM2-213ENST00000448520 HERC2O95714 4834 aa9.82□□□□□ -0.84
PDLIM2-213ENST00000448520 TMEM189A5PLL7 270 aa9.82□□□□□ -0.84
PDLIM2-213ENST00000448520 TMEM250H0YL14 139 aa9.82□□□□□ -0.84
PDLIM2-213ENST00000448520 RNASE4P34096 147 aaKnown RBP9.82□□□□□ -0.84
PDLIM2-213ENST00000448520 LEPP41159 167 aa9.82□□□□□ -0.84
PDLIM2-213ENST00000448520 ZNF80P51504 273 aaPredicted RBP9.82□□□□□ -0.84
PDLIM2-213ENST00000448520 GFI1BQ5VTD9 330 aa9.82□□□□□ -0.84
PDLIM2-213ENST00000448520 ODF3Q96PU9 254 aa9.82□□□□□ -0.84
PDLIM2-213ENST00000448520 CELA1Q9UNI1 258 aa9.82□□□□□ -0.84
PDLIM2-213ENST00000448520 TRAV12-3A0A0B4J271 114 aa9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 TRBV6-1A0A0K0K1D8 114 aa9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 KLLNB2CW77 178 aa9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 LTAP01374 205 aa9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 SPART-AS1P0CW21 52 aa9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 CRISP2P16562 243 aa9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 CDKN1BP46527 198 aa9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 ZNF705AQ6ZN79 300 aaPredicted RBP9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 BAGE2Q86Y30 109 aa9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 ZC2HC1AQ96GY0 325 aa9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 FAM210BQ96KR6 192 aa9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 MUC4Q99102 2169 aa9.81□□□□□ -0.84
PDLIM2-213ENST00000448520 IGLV2-8P01709 118 aa9.8□□□□□ -0.84
PDLIM2-213ENST00000448520 PRM2P04554 102 aa9.8□□□□□ -0.84
PDLIM2-213ENST00000448520 GPX1P07203 203 aa9.8□□□□□ -0.84
PDLIM2-213ENST00000448520 SFTA3P0C7M3 94 aa9.8□□□□□ -0.84
PDLIM2-213ENST00000448520 TSPOP30536 169 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms