RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 KIR2DL5AQ8N109 375 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 G3V318 75 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 AMTNQ6UX39 209 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 C20orf78Q9BR46 151 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 ZNF747Q9BV97 191 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 XCL2Q9UBD3 114 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 WIPF2Q8TF74 440 aaPredicted RBP6.2□□□□□ -1.42
NEDD9-204ENST00000448183 KLK9Q9UKQ9 250 aa6.2□□□□□ -1.42
NEDD9-204ENST00000448183 IGLC7A0M8Q6 106 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 K7ERJ3 54 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 IGLV3-1P01715 115 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 C12orf74Q32Q52 190 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 ZNF524Q96C55 264 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 DKK2Q9UBU2 259 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 KLF2Q9Y5W3 355 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-204ENST00000448183 K7EN84 100 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 NDUFA4O00483 81 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 AZU1P20160 251 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 ZNF134P52741 427 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 CARD19Q96LW7 228 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 PROK2Q9HC23 129 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 IGHV3-16A0A0C4DH30 117 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 CDKN1BP46527 198 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 HAMPP81172 84 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 KLF5Q13887 457 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-204ENST00000448183 DUX4L9Q6RFH8 374 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-204ENST00000448183 TPSG1Q9NRR2 321 aa6.19□□□□□ -1.42
NEDD9-204ENST00000448183 LTAP01374 205 aa6.18□□□□□ -1.42
NEDD9-204ENST00000448183 TEX36Q5VZQ5 186 aa6.18□□□□□ -1.42
NEDD9-204ENST00000448183 DEFB125Q8N687 156 aa6.18□□□□□ -1.42
NEDD9-204ENST00000448183 TMEM243Q9BU79 118 aa6.18□□□□□ -1.42
NEDD9-204ENST00000448183 CDPF1Q6NVV7 123 aa6.18□□□□□ -1.42
NEDD9-204ENST00000448183 UBE2DNLQ8IWF7 75 aa6.18□□□□□ -1.42
NEDD9-204ENST00000448183 BOD1L2Q8IYS8 172 aa6.18□□□□□ -1.42
NEDD9-204ENST00000448183 LINC01356Q8N9X3 169 aa6.18□□□□□ -1.42
NEDD9-204ENST00000448183 ZNRF2Q8NHG8 242 aa6.18□□□□□ -1.42
NEDD9-204ENST00000448183 IGLV3-9A0A075B6K5 115 aa6.18□□□□□ -1.42
NEDD9-204ENST00000448183 ZNF503-AS2A6NEH8 195 aa6.18□□□□□ -1.42
NEDD9-204ENST00000448183 SRSF2Q01130 221 aaKnown RBP6.18□□□□□ -1.42
NEDD9-204ENST00000448183 NTN5Q8WTR8 489 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-204ENST00000448183 GATA3P23771 443 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 GTF3C1Q12789 2109 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 RBMY1FQ15415 496 aaKnown RBP6.17□□□□□ -1.42
NEDD9-204ENST00000448183 RUSC1-AS1Q66K80 236 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 Q8NFD4 153 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 TRAV13-2A0A0B4J235 113 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 IGHV1-69DA0A0B4J2H0 117 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 CCL25O15444 150 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 GAGE7O76087 117 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 IGHV1-69P01742 117 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 MSMBP08118 114 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 GAGE12FP0CL80 117 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 GAGE12GP0CL81 117 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 GAGE12IP0CL82 117 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 GNLYP22749 145 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 ZNF491Q8N8L2 437 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 VWA8A3KMH1 1905 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 ZNF561-AS1K7EIQ3 104 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 RPL32P62910 135 aaKnown RBP6.17□□□□□ -1.42
NEDD9-204ENST00000448183 FAM120AOSQ5T036 256 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 ASPHD1Q5U4P2 390 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 ZNF493Q6ZR52 646 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 CITED1Q99966 193 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 PLXNA3P51805 1871 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 CHD3Q12873 2000 aaKnown RBP6.17□□□□□ -1.42
NEDD9-204ENST00000448183 IGLV1-44P01699 117 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 ANKRD29Q8N6D5 301 aa6.17□□□□□ -1.42
NEDD9-204ENST00000448183 IGHV3-38A0A0C4DH36 116 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 PRSS29PA6NIE9 313 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 K7EMI3 77 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 NXPH4O95158 308 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 TRACP01848 142 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 CFC1BP0CG36 223 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 CFC1P0CG37 223 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 HERVK_113P63121 156 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 TRAV12-2A0A075B6T6 113 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 PSCAO43653 123 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 C15orf53Q8NAA6 179 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 RNF114Q9Y508 228 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 WDR81Q562E7 1941 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 CRLF1O75462 422 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 Q6ZVH6 145 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 PCP2Q8IVA1 136 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 IGHV2-70DA0A0C4DH43 119 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 LINC01619G3V211 115 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 TMEM126AQ9H061 195 aa6.16□□□□□ -1.42
NEDD9-204ENST00000448183 IGHG4P01861 327 aa6.15□□□□□ -1.42
NEDD9-204ENST00000448183 CFHR3Q02985 330 aa6.15□□□□□ -1.42
NEDD9-204ENST00000448183 TCTEX1D4Q5JR98 221 aa6.15□□□□□ -1.42
NEDD9-204ENST00000448183 SCRT2Q9NQ03 307 aa6.15□□□□□ -1.42
NEDD9-204ENST00000448183 CEACAM8P31997 349 aaPredicted RBP6.15□□□□□ -1.42
NEDD9-204ENST00000448183 GAGE6Q13070 117 aa6.15□□□□□ -1.42
NEDD9-204ENST00000448183 DIAPH2-AS1Q14236 149 aa6.15□□□□□ -1.42
NEDD9-204ENST00000448183 EGR2P11161 476 aaPredicted RBP6.15□□□□□ -1.43
NEDD9-204ENST00000448183 SUMO4Q6EEV6 95 aa6.15□□□□□ -1.43
NEDD9-204ENST00000448183 CRYBA4P53673 196 aa6.15□□□□□ -1.43
NEDD9-204ENST00000448183 RHOHQ15669 191 aa6.15□□□□□ -1.43
NEDD9-204ENST00000448183 KAAG1Q9UBP8 84 aa6.15□□□□□ -1.43
NEDD9-204ENST00000448183 LENEPQ9Y5L5 61 aa6.15□□□□□ -1.43
NEDD9-204ENST00000448183 DYSFO75923 2080 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms