RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 VCX2Q9H322 139 aa10.01□□□□□ -0.81
SHC1-210ENST00000448116 PRSS1P07477 247 aa10□□□□□ -0.81
SHC1-210ENST00000448116 IL17RELQ6ZVW7 336 aa10□□□□□ -0.81
SHC1-210ENST00000448116 PCP2Q8IVA1 136 aa10□□□□□ -0.81
SHC1-210ENST00000448116 MAP1LC3AQ9H492 121 aa10□□□□□ -0.81
SHC1-210ENST00000448116 U3KQK5 164 aa10□□□□□ -0.81
SHC1-210ENST00000448116 SPTBN4Q9H254 2564 aa10□□□□□ -0.81
SHC1-210ENST00000448116 ADORA2A-AS1P86434 159 aa10□□□□□ -0.81
SHC1-210ENST00000448116 PIMREGQ9BSJ6 248 aa10□□□□□ -0.81
SHC1-210ENST00000448116 LEPP41159 167 aa9.99□□□□□ -0.81
SHC1-210ENST00000448116 LGALS9BQ3B8N2 356 aa9.99□□□□□ -0.81
SHC1-210ENST00000448116 LGALS9CQ6DKI2 356 aa9.99□□□□□ -0.81
SHC1-210ENST00000448116 Q8N9W7 124 aa9.99□□□□□ -0.81
SHC1-210ENST00000448116 A1L4Q6 167 aa9.99□□□□□ -0.81
SHC1-210ENST00000448116 LINC01548A6NM66 108 aa9.99□□□□□ -0.81
SHC1-210ENST00000448116 ATP6V0E1O15342 81 aa9.99□□□□□ -0.81
SHC1-210ENST00000448116 PEF1Q9UBV8 284 aaKnown RBP9.99□□□□□ -0.81
SHC1-210ENST00000448116 LINC00527Q9UJ94 153 aa9.99□□□□□ -0.81
SHC1-210ENST00000448116 UFC1Q9Y3C8 167 aa9.99□□□□□ -0.81
SHC1-210ENST00000448116 MSRB2Q9Y3D2 182 aa9.99□□□□□ -0.81
SHC1-210ENST00000448116 NBL1P41271 181 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 TMEM190Q8WZ59 177 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 IGHV3OR16-10A0A075B7F0 116 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 IGLC6P0CF74 106 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 FBXL19-AS1Q494R0 122 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 FAM110AQ9BQ89 295 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 B5MCH6 92 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 G3V4G9 280 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 H3BUT2 72 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 Q8N6K4 173 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 TTTY13Q9BZ97 58 aa9.98□□□□□ -0.81
SHC1-210ENST00000448116 SMAD7O15105 426 aaKnown RBP9.97□□□□□ -0.81
SHC1-210ENST00000448116 TNFRSF6BO95407 300 aa9.97□□□□□ -0.81
SHC1-210ENST00000448116 FGF6P10767 208 aa9.97□□□□□ -0.81
SHC1-210ENST00000448116 RNF185Q96GF1 192 aa9.97□□□□□ -0.81
SHC1-210ENST00000448116 SIGMAR1Q99720 223 aa9.97□□□□□ -0.81
SHC1-210ENST00000448116 UBTD1Q9HAC8 227 aa9.97□□□□□ -0.81
SHC1-210ENST00000448116 RPL32P62910 135 aaKnown RBP9.97□□□□□ -0.81
SHC1-210ENST00000448116 RAXQ9Y2V3 346 aa9.97□□□□□ -0.81
SHC1-210ENST00000448116 NCOR2Q9Y618 2525 aa9.97□□□□□ -0.81
SHC1-210ENST00000448116 BUB3O43684 328 aa9.97□□□□□ -0.81
SHC1-210ENST00000448116 MINOS1Q5TGZ0 78 aa9.97□□□□□ -0.81
SHC1-210ENST00000448116 AGPAT4-IT1Q9H0P7 198 aa9.97□□□□□ -0.81
SHC1-210ENST00000448116 MINOS1-NBL1R4GNA1 71 aa9.97□□□□□ -0.81
SHC1-210ENST00000448116 HRNRQ86YZ3 2850 aaPredicted RBP9.96□□□□□ -0.81
SHC1-210ENST00000448116 SAA4P35542 130 aa9.96□□□□□ -0.81
SHC1-210ENST00000448116 SEC11AP67812 179 aa9.96□□□□□ -0.81
SHC1-210ENST00000448116 Q6ZQT7 251 aa9.96□□□□□ -0.81
SHC1-210ENST00000448116 ZNF502Q8TBZ5 544 aa9.96□□□□□ -0.81
SHC1-210ENST00000448116 A6NDN8 102 aa9.96□□□□□ -0.82
SHC1-210ENST00000448116 C11orf71Q6IPW1 123 aa9.96□□□□□ -0.82
SHC1-210ENST00000448116 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.96□□□□□ -0.82
SHC1-210ENST00000448116 TMEM219Q86XT9 240 aa9.96□□□□□ -0.82
SHC1-210ENST00000448116 TRAV26-2A0A0B4J265 109 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 TMEM78Q5T7P6 136 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 DTX2Q86UW9 622 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 TMEM158Q8WZ71 300 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 FOXC2Q99958 501 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 HIVEP3Q5T1R4 2406 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 SPG11Q96JI7 2443 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 A0A1W2PPR1 153 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 OOSP1A8MZH6 123 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 SPRY2O43597 315 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 TRGV3P03979 118 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 KIR3DS1Q14943 382 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 ZNF575Q86XF7 245 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 FAM110DQ8TAY7 271 aaPredicted RBP9.95□□□□□ -0.82
SHC1-210ENST00000448116 RPL24P83731 157 aaKnown RBP9.95□□□□□ -0.82
SHC1-210ENST00000448116 C11orf21Q9P2W6 132 aa9.95□□□□□ -0.82
SHC1-210ENST00000448116 IGKV3D-20A0A0C4DH25 116 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 EBI3Q14213 229 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 ANXA2RQ3ZCQ2 193 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 ZFAND3Q9H8U3 227 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 GCSHP23434 173 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 GTSCR1Q86UQ5 136 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 METTL26Q96S19 204 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 SIRPDQ9H106 197 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 PAX8Q06710 450 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 SPANXN1Q5VSR9 72 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 COX8CQ7Z4L0 72 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 TMEM160Q9NX00 188 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 CHD8Q9HCK8 2581 aa9.94□□□□□ -0.82
SHC1-210ENST00000448116 IGKV3-7A0A075B6H7 116 aa9.93□□□□□ -0.82
SHC1-210ENST00000448116 FCER1GP30273 86 aa9.93□□□□□ -0.82
SHC1-210ENST00000448116 HSD52Q0P140 79 aa9.93□□□□□ -0.82
SHC1-210ENST00000448116 KLRB1Q12918 225 aa9.93□□□□□ -0.82
SHC1-210ENST00000448116 CCDC140Q96MF4 163 aa9.93□□□□□ -0.82
SHC1-210ENST00000448116 NXT2Q9NPJ8 142 aaKnown RBP9.93□□□□□ -0.82
SHC1-210ENST00000448116 IGKV2D-26A0A0A0MRZ7 120 aa9.93□□□□□ -0.82
SHC1-210ENST00000448116 OR9G4Q8NGQ1 327 aa9.93□□□□□ -0.82
SHC1-210ENST00000448116 TSSC4Q9Y5U2 329 aaPredicted RBP9.93□□□□□ -0.82
SHC1-210ENST00000448116 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.93□□□□□ -0.821e-6■■■■□ 25.8
SHC1-210ENST00000448116 EEF1AKMT3Q96AZ1 226 aa9.92□□□□□ -0.82
SHC1-210ENST00000448116 C16orf92Q96LL3 132 aa9.92□□□□□ -0.82
SHC1-210ENST00000448116 SLC50A1Q9BRV3 221 aa9.92□□□□□ -0.82
SHC1-210ENST00000448116 LINC01559Q495D7 138 aa9.92□□□□□ -0.82
SHC1-210ENST00000448116 C8orf86Q6ZUL3 223 aa9.92□□□□□ -0.82
SHC1-210ENST00000448116 RNF183Q96D59 192 aa9.92□□□□□ -0.82
SHC1-210ENST00000448116 JMJD8Q96S16 334 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms