RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TMEM213A2RRL7 107 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 FAM181BA6NEQ2 426 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 ELANEP08246 267 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 CTRLP40313 264 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 RPS20P60866 119 aaKnown RBP13.22□□□□□ -0.29
SMC6-206ENST00000446852 BORCS7Q96B45 105 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 URB1-AS1Q96HZ7 61 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 PPP1R14DQ9NXH3 145 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 C11orf21Q9P2W6 132 aa13.22□□□□□ -0.29
SMC6-206ENST00000446852 SCGB1D1O95968 90 aa13.21□□□□□ -0.29
SMC6-206ENST00000446852 LINC01559Q495D7 138 aa13.21□□□□□ -0.29
SMC6-206ENST00000446852 LGALS1P09382 135 aaKnown RBP13.21□□□□□ -0.29
SMC6-206ENST00000446852 SRD5A1P18405 259 aa13.21□□□□□ -0.29
SMC6-206ENST00000446852 Q8N2B8 174 aa13.21□□□□□ -0.29
SMC6-206ENST00000446852 FER1L6-AS1Q8NA97 138 aa13.21□□□□□ -0.29
SMC6-206ENST00000446852 M0QZ24 198 aa13.2□□□□□ -0.3
SMC6-206ENST00000446852 Q6ZQT7 251 aa13.2□□□□□ -0.3
SMC6-206ENST00000446852 ZNF493Q6ZR52 646 aa13.2□□□□□ -0.3
SMC6-206ENST00000446852 RNF152Q8N8N0 203 aa13.2□□□□□ -0.3
SMC6-206ENST00000446852 UFC1Q9Y3C8 167 aa13.2□□□□□ -0.3
SMC6-206ENST00000446852 PRR9Q5T870 116 aa13.2□□□□□ -0.3
SMC6-206ENST00000446852 NIT1Q86X76 327 aa13.2□□□□□ -0.3
SMC6-206ENST00000446852 NAGKQ9UJ70 344 aa13.2□□□□□ -0.3
SMC6-206ENST00000446852 IGHV4OR15-8A0A075B7B6 117 aa13.19□□□□□ -0.3
SMC6-206ENST00000446852 A0A087WW49 117 aa13.19□□□□□ -0.3
SMC6-206ENST00000446852 IGKV3D-20A0A0C4DH25 116 aa13.19□□□□□ -0.3
SMC6-206ENST00000446852 RNASEKQ6P5S7 137 aaKnown RBP13.19□□□□□ -0.3
SMC6-206ENST00000446852 UBE2E2Q96LR5 201 aa13.19□□□□□ -0.3
SMC6-206ENST00000446852 NTF3P20783 257 aa13.19□□□□□ -0.3
SMC6-206ENST00000446852 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
SMC6-206ENST00000446852 PRO1933Q9H354 126 aa13.19□□□□□ -0.3
SMC6-206ENST00000446852 F6UB75 175 aa13.18□□□□□ -0.3
SMC6-206ENST00000446852 OVOL1O14753 267 aa13.18□□□□□ -0.3
SMC6-206ENST00000446852 KRTAP1-1Q07627 177 aa13.18□□□□□ -0.3
SMC6-206ENST00000446852 HSBP1O75506 76 aa13.18□□□□□ -0.3
SMC6-206ENST00000446852 SYNJ2BPP57105 145 aa13.17□□□□□ -0.3
SMC6-206ENST00000446852 ZNF664Q8N3J9 261 aa13.17□□□□□ -0.3
SMC6-206ENST00000446852 OR10J6PQ8NGY7 276 aa13.17□□□□□ -0.3
SMC6-206ENST00000446852 DCANP1Q8TF63 244 aa13.17□□□□□ -0.3
SMC6-206ENST00000446852 LINC00477Q96M19 166 aa13.17□□□□□ -0.3
SMC6-206ENST00000446852 LENEPQ9Y5L5 61 aa13.17□□□□□ -0.3
SMC6-206ENST00000446852 FASNP49327 2511 aaKnown RBP13.16□□□□□ -0.3
SMC6-206ENST00000446852 PKIAP61925 76 aa13.16□□□□□ -0.3
SMC6-206ENST00000446852 C18orf65Q6ZTR6 163 aa13.16□□□□□ -0.3
SMC6-206ENST00000446852 ZFAND2AQ8N6M9 145 aa13.16□□□□□ -0.3
SMC6-206ENST00000446852 CNFNQ9BYD5 112 aa13.16□□□□□ -0.3
SMC6-206ENST00000446852 ANK3Q12955 4377 aaKnown RBP13.16□□□□□ -0.3
SMC6-206ENST00000446852 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
SMC6-206ENST00000446852 KRTDAPP60985 99 aa13.16□□□□□ -0.3
SMC6-206ENST00000446852 TWIST1Q15672 202 aa13.16□□□□□ -0.3
SMC6-206ENST00000446852 REC114Q7Z4M0 266 aa13.16□□□□□ -0.3
SMC6-206ENST00000446852 AMN1Q8IY45 258 aa13.16□□□□□ -0.3
SMC6-206ENST00000446852 KLHDC1Q8N7A1 406 aa13.16□□□□□ -0.3
SMC6-206ENST00000446852 OR8A1Q8NGG7 326 aa13.16□□□□□ -0.3
SMC6-206ENST00000446852 MSRB1Q9NZV6 116 aa13.16□□□□□ -0.3
SMC6-206ENST00000446852 FAM104BQ5XKR9 115 aa13.15□□□□□ -0.3
SMC6-206ENST00000446852 HECTD1Q9ULT8 2610 aa13.15□□□□□ -0.3
SMC6-206ENST00000446852 J3KRW8 73 aa13.15□□□□□ -0.3
SMC6-206ENST00000446852 TMEM86BQ8N661 226 aa13.15□□□□□ -0.3
SMC6-206ENST00000446852 Q8N976 141 aa13.15□□□□□ -0.3
SMC6-206ENST00000446852 DNAJC9-AS1A6NH13 148 aa13.14□□□□□ -0.31
SMC6-206ENST00000446852 M0R2Z0 102 aa13.14□□□□□ -0.31
SMC6-206ENST00000446852 DEFB136Q30KP8 78 aa13.14□□□□□ -0.31
SMC6-206ENST00000446852 WFDC3Q8IUB2 231 aa13.14□□□□□ -0.31
SMC6-206ENST00000446852 TEX29Q8N6K0 151 aa13.14□□□□□ -0.31
SMC6-206ENST00000446852 FAM19A4Q96LR4 140 aa13.14□□□□□ -0.31
SMC6-206ENST00000446852 FOXC2Q99958 501 aa13.14□□□□□ -0.31
SMC6-206ENST00000446852 TSTD3H0UI37 97 aa13.14□□□□□ -0.31
SMC6-206ENST00000446852 LGALS9O00182 355 aa13.14□□□□□ -0.31
SMC6-206ENST00000446852 PMCHL1Q16048 86 aa13.14□□□□□ -0.31
SMC6-206ENST00000446852 MS4A6AQ9H2W1 248 aa13.14□□□□□ -0.31
SMC6-206ENST00000446852 C3orf79P0CE67 100 aa13.13□□□□□ -0.31
SMC6-206ENST00000446852 TCTEX1D4Q5JR98 221 aa13.13□□□□□ -0.31
SMC6-206ENST00000446852 MTORP42345 2549 aa13.13□□□□□ -0.31
SMC6-206ENST00000446852 D6R8Y8 96 aa13.13□□□□□ -0.31
SMC6-206ENST00000446852 CHCHD1Q96BP2 118 aaKnown RBP13.13□□□□□ -0.31
SMC6-206ENST00000446852 CSN3P07498 182 aa13.12□□□□□ -0.31
SMC6-206ENST00000446852 LINC00614P0C842 121 aa13.12□□□□□ -0.31
SMC6-206ENST00000446852 KIR3DS1Q14943 382 aa13.12□□□□□ -0.31
SMC6-206ENST00000446852 TDRG1Q3Y452 100 aa13.12□□□□□ -0.31
SMC6-206ENST00000446852 MRPL51Q4U2R6 128 aaKnown RBP13.12□□□□□ -0.31
SMC6-206ENST00000446852 ESM1Q9NQ30 184 aa13.12□□□□□ -0.31
SMC6-206ENST00000446852 U3KQK5 164 aa13.12□□□□□ -0.31
SMC6-206ENST00000446852 IGHV1-24A0A0C4DH33 117 aa13.12□□□□□ -0.31
SMC6-206ENST00000446852 TFPI2P48307 235 aa13.12□□□□□ -0.31
SMC6-206ENST00000446852 TEX43Q6ZNM6 134 aa13.12□□□□□ -0.31
SMC6-206ENST00000446852 Q6ZSV7 163 aa13.12□□□□□ -0.31
SMC6-206ENST00000446852 C2orf70A6NJV1 201 aa13.11□□□□□ -0.31
SMC6-206ENST00000446852 ID1P41134 155 aa13.11□□□□□ -0.31
SMC6-206ENST00000446852 TMEM191AQ9H0A3 160 aa13.11□□□□□ -0.31
SMC6-206ENST00000446852 CD5LO43866 347 aa13.11□□□□□ -0.31
SMC6-206ENST00000446852 SLURP1P55000 103 aa13.11□□□□□ -0.31
SMC6-206ENST00000446852 HIST2H2BDQ6DRA6 164 aa13.11□□□□□ -0.31
SMC6-206ENST00000446852 EBLN2Q6P2I7 272 aa13.11□□□□□ -0.31
SMC6-206ENST00000446852 OR10AG1Q8NH19 301 aa13.11□□□□□ -0.31
SMC6-206ENST00000446852 DDTP30046 118 aa13.1□□□□□ -0.31
SMC6-206ENST00000446852 SAMD13Q5VXD3 122 aa13.1□□□□□ -0.31
SMC6-206ENST00000446852 APRG1Q8IVJ8 170 aa13.1□□□□□ -0.31
SMC6-206ENST00000446852 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
SMC6-206ENST00000446852 DMRTA1Q5VZB9 504 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms