RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 DSCAMO60469 2012 aa9.54□□□□□ -0.88
APLF-203ENST00000445692 IGLV3-9A0A075B6K5 115 aa9.54□□□□□ -0.88
APLF-203ENST00000445692 IGHG3P01860 377 aa9.54□□□□□ -0.88
APLF-203ENST00000445692 RNASE4P34096 147 aaKnown RBP9.54□□□□□ -0.88
APLF-203ENST00000445692 NPC2P61916 151 aa9.54□□□□□ -0.88
APLF-203ENST00000445692 PRSS33Q8NF86 280 aa9.54□□□□□ -0.88
APLF-203ENST00000445692 TET2Q6N021 2002 aaPredicted RBP9.54□□□□□ -0.88
APLF-203ENST00000445692 SPENQ96T58 3664 aaKnown RBP9.54□□□□□ -0.88
APLF-203ENST00000445692 TLN2Q9Y4G6 2542 aa9.54□□□□□ -0.88
APLF-203ENST00000445692 BUB1B-PAK6H3BSN5 160 aa9.54□□□□□ -0.88
APLF-203ENST00000445692 IL17RELQ6ZVW7 336 aa9.54□□□□□ -0.88
APLF-203ENST00000445692 URB1-AS1Q96HZ7 61 aa9.54□□□□□ -0.88
APLF-203ENST00000445692 GFRA4Q9GZZ7 299 aa9.54□□□□□ -0.88
APLF-203ENST00000445692 A0A0U1RRA0 63 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 CCL21O00585 134 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 C3orf56Q8N813 242 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 DMXL2Q8TDJ6 3036 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 IGHV4-39P01824 125 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 C15orf32Q32M92 178 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 CT83Q5H943 113 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 RAX2Q96IS3 184 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 A0A1B0GXF2 115 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 IGKV1-17P01599 117 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 TMEM219Q86XT9 240 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 OR10J6PQ8NGY7 276 aa9.53□□□□□ -0.88
APLF-203ENST00000445692 IGKV3D-20A0A0C4DH25 116 aa9.52□□□□□ -0.88
APLF-203ENST00000445692 K7EM74 188 aa9.52□□□□□ -0.88
APLF-203ENST00000445692 LGALS9BQ3B8N2 356 aa9.52□□□□□ -0.89
APLF-203ENST00000445692 LGALS9CQ6DKI2 356 aa9.52□□□□□ -0.89
APLF-203ENST00000445692 THAP8Q8NA92 274 aa9.52□□□□□ -0.89
APLF-203ENST00000445692 PRR25Q96S07 402 aa9.52□□□□□ -0.89
APLF-203ENST00000445692 LINC01549A6NIU2 74 aa9.52□□□□□ -0.89
APLF-203ENST00000445692 LGALS3P17931 250 aaKnown RBP9.52□□□□□ -0.89
APLF-203ENST00000445692 APOBEC3AP31941 199 aaPredicted RBP9.52□□□□□ -0.89
APLF-203ENST00000445692 FOXE3Q13461 319 aa9.52□□□□□ -0.89
APLF-203ENST00000445692 ZNF56Q15929 161 aa9.52□□□□□ -0.89
APLF-203ENST00000445692 BOD1L2Q8IYS8 172 aa9.52□□□□□ -0.89
APLF-203ENST00000445692 DKK4Q9UBT3 224 aa9.52□□□□□ -0.89
APLF-203ENST00000445692 TRAV2A0A0B4J234 112 aa9.51□□□□□ -0.89
APLF-203ENST00000445692 A0A0G2JNJ9 132 aa9.51□□□□□ -0.89
APLF-203ENST00000445692 A8MWV9 139 aa9.51□□□□□ -0.89
APLF-203ENST00000445692 LAGE3Q14657 143 aa9.51□□□□□ -0.89
APLF-203ENST00000445692 ZNF491Q8N8L2 437 aa9.51□□□□□ -0.89
APLF-203ENST00000445692 Q9UFV3 132 aa9.51□□□□□ -0.89
APLF-203ENST00000445692 FAM215AQ9Y5M1 114 aa9.51□□□□□ -0.89
APLF-203ENST00000445692 TRBV25-1A0A075B6N4 114 aa9.51□□□□□ -0.89
APLF-203ENST00000445692 C10orf142B7Z368 130 aa9.51□□□□□ -0.89
APLF-203ENST00000445692 PRR30Q53SZ7 412 aaPredicted RBP9.51□□□□□ -0.89
APLF-203ENST00000445692 LHBP01229 141 aa9.5□□□□□ -0.89
APLF-203ENST00000445692 SRSF1Q07955 248 aaKnown RBP eCLIP9.5□□□□□ -0.89
APLF-203ENST00000445692 CCDC144NLQ6NUI1 221 aa9.5□□□□□ -0.89
APLF-203ENST00000445692 FAM57AQ8TBR7 257 aa9.5□□□□□ -0.89
APLF-203ENST00000445692 MBD3L4A6NDZ8 208 aaPredicted RBP9.5□□□□□ -0.89
APLF-203ENST00000445692 MBD3L3A6NE82 208 aaPredicted RBP9.5□□□□□ -0.89
APLF-203ENST00000445692 MBD3L5A6NJ08 208 aaPredicted RBP9.5□□□□□ -0.89
APLF-203ENST00000445692 TSPAN13O95857 204 aa9.5□□□□□ -0.89
APLF-203ENST00000445692 DEFB1P60022 68 aa9.5□□□□□ -0.89
APLF-203ENST00000445692 TMEM155Q4W5P6 130 aa9.5□□□□□ -0.89
APLF-203ENST00000445692 DTX2Q86UW9 622 aa9.5□□□□□ -0.89
APLF-203ENST00000445692 MBD3L2Q8NHZ7 208 aaPredicted RBP9.5□□□□□ -0.89
APLF-203ENST00000445692 HLA-DRB4P13762 266 aa9.5□□□□□ -0.89
APLF-203ENST00000445692 C20orf78Q9BR46 151 aa9.5□□□□□ -0.89
APLF-203ENST00000445692 HLA-DRB4X5D2U9 266 aa9.5□□□□□ -0.89
APLF-203ENST00000445692 ZNF672Q499Z4 452 aaPredicted RBP9.5□□□□□ -0.89
APLF-203ENST00000445692 SMG1Q96Q15 3661 aaKnown RBP9.49□□□□□ -0.89
APLF-203ENST00000445692 C19orf71A6NCJ1 209 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 E7EQL1 145 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 SLC25A16P16260 332 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 TMEM95Q3KNT9 176 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 SIGLEC15Q6ZMC9 328 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 IGKV2D-26A0A0A0MRZ7 120 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 G3V318 75 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 TRGV3P03979 118 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 SEM1Q6ZVN7 128 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 A0A087WWL8 130 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 B9A039 149 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 ZNF883P0CG24 379 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 C5orf64Q2M2E5 130 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 TEX36Q5VZQ5 186 aa9.49□□□□□ -0.89
APLF-203ENST00000445692 DLX4Q92988 240 aaPredicted RBP9.49□□□□□ -0.89
APLF-203ENST00000445692 F8W1H4 67 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 CGB3P0DN86 165 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 CGB7P0DN87 165 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 DYNAPQ8N1N2 210 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 NOTCH2Q04721 2471 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 USP9YO00507 2555 aaPredicted RBP9.48□□□□□ -0.89
APLF-203ENST00000445692 GAS8-AS1O95177 125 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 ASIPP42127 132 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 HERV-K104P63124 156 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 DGAT2L7PQ6IED9 249 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 C2orf91Q6ZV80 131 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 PTH2Q96A98 100 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 AKAP13Q12802 2813 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 PRAC2D3DTV9 90 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 C12orf74Q32Q52 190 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 KIR2DL4Q99706 377 aa9.48□□□□□ -0.89
APLF-203ENST00000445692 H3BRN7 92 aa9.47□□□□□ -0.89
APLF-203ENST00000445692 GATA4P43694 442 aa9.47□□□□□ -0.89
APLF-203ENST00000445692 KLHL30-AS1Q8NEE0 82 aa9.47□□□□□ -0.89
APLF-203ENST00000445692 RNF183Q96D59 192 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms