RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 SYT8Q8NBV8 401 aa8.21□□□□□ -1.09
CALD1-210ENST00000443197 VPREB3Q9UKI3 123 aa8.21□□□□□ -1.09
CALD1-210ENST00000443197 A0A1B0GW15 77 aa8.21□□□□□ -1.09
CALD1-210ENST00000443197 C3orf79P0CE67 100 aa8.21□□□□□ -1.09
CALD1-210ENST00000443197 ZNF492Q9P255 531 aa8.21□□□□□ -1.09
CALD1-210ENST00000443197 ZMAT5Q9UDW3 170 aaKnown RBP8.21□□□□□ -1.09
CALD1-210ENST00000443197 WI2-2373I1.2A0A1W2PRP0 233 aa8.21□□□□□ -1.1
CALD1-210ENST00000443197 A8MWP6 167 aa8.21□□□□□ -1.1
CALD1-210ENST00000443197 J3QLI3 93 aa8.21□□□□□ -1.1
CALD1-210ENST00000443197 EGR2P11161 476 aaPredicted RBP8.21□□□□□ -1.1
CALD1-210ENST00000443197 EMP1P54849 157 aa8.21□□□□□ -1.1
CALD1-210ENST00000443197 DEFB131AP59861 70 aa8.21□□□□□ -1.1
CALD1-210ENST00000443197 SPINK13Q1W4C9 94 aa8.21□□□□□ -1.1
CALD1-210ENST00000443197 LINC00322Q6ZN03 302 aaPredicted RBP8.21□□□□□ -1.1
CALD1-210ENST00000443197 LEPP41159 167 aa8.21□□□□□ -1.1
CALD1-210ENST00000443197 TMEM160Q9NX00 188 aa8.21□□□□□ -1.1
CALD1-210ENST00000443197 COL27A1Q8IZC6 1860 aaPredicted RBP8.2□□□□□ -1.1
CALD1-210ENST00000443197 LOC102724200A0A096LPH7 203 aaPredicted RBP8.2□□□□□ -1.1
CALD1-210ENST00000443197 IGHV3-73A0A0B4J1V6 119 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 AVPP01185 164 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 IFI27P40305 119 aaPredicted RBP8.2□□□□□ -1.1
CALD1-210ENST00000443197 TCTEX1D4Q5JR98 221 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 C1orf194Q5T5A4 169 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 Q6ZS46 218 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 LINC00477Q96M19 166 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 CCDC140Q96MF4 163 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 PRDM13Q9H4Q3 707 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 FOXE3Q13461 319 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 C10orf99Q6UWK7 81 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 WFDC11Q8NEX6 87 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 SAP30O75446 220 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 ZNF25P17030 456 aaPredicted RBP8.2□□□□□ -1.1
CALD1-210ENST00000443197 UQCR10Q9UDW1 63 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 COL12A1Q99715 3063 aa8.2□□□□□ -1.1
CALD1-210ENST00000443197 IGLC2P0DOY2 106 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 RASL11AQ6T310 242 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 ZNF664Q8N3J9 261 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 SMIM12Q96EX1 92 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 DCHS1Q96JQ0 3298 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 A0A087WWL8 130 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 IGHV7-4-1A0A0J9YVY3 117 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 IGLV2-8P01709 118 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 IGHG2P01859 326 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 PRSS57Q6UWY2 283 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 GTSF1Q8WW33 167 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 UBE2E2Q96LR5 201 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 FOXC2Q99958 501 aa8.19□□□□□ -1.1
CALD1-210ENST00000443197 ALKBH7Q9BT30 221 aaPredicted RBP8.19□□□□□ -1.1
CALD1-210ENST00000443197 MSRB1Q9NZV6 116 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 KLK9Q9UKQ9 250 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 TRAV26-2A0A0B4J265 109 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 CACNG7P62955 275 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 SCGB1D4Q6XE38 83 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 STHQ8IWL8 128 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 KIR2DL4Q99706 377 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 A0A1B0GV90 55 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 HOXD3P31249 432 aaPredicted RBP8.18□□□□□ -1.1
CALD1-210ENST00000443197 Q0VG73 95 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 EBI3Q14213 229 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 Q6ZWC4 215 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 WIPF2Q8TF74 440 aaPredicted RBP8.18□□□□□ -1.1
CALD1-210ENST00000443197 OR1N2Q8NGR9 330 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 GFRA4Q9GZZ7 299 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 SMPXQ9UHP9 88 aa8.18□□□□□ -1.1
CALD1-210ENST00000443197 A6NDX4 124 aa8.17□□□□□ -1.1
CALD1-210ENST00000443197 SLURP1P55000 103 aa8.17□□□□□ -1.1
CALD1-210ENST00000443197 CT83Q5H943 113 aa8.17□□□□□ -1.1
CALD1-210ENST00000443197 SLC25A34Q6PIV7 304 aa8.17□□□□□ -1.1
CALD1-210ENST00000443197 TRAV8-6A0A0B4J262 113 aa8.17□□□□□ -1.1
CALD1-210ENST00000443197 KNCNA6PVL3 124 aa8.17□□□□□ -1.1
CALD1-210ENST00000443197 RRN3P1Q2M238 152 aa8.17□□□□□ -1.1
CALD1-210ENST00000443197 ANXA2RQ3ZCQ2 193 aa8.17□□□□□ -1.1
CALD1-210ENST00000443197 hDV102S1A0JD36 115 aa8.16□□□□□ -1.1
CALD1-210ENST00000443197 KALRNO60229 2985 aa8.16□□□□□ -1.1
CALD1-210ENST00000443197 DUSP14O95147 198 aaKnown RBP8.16□□□□□ -1.1
CALD1-210ENST00000443197 HBDP02042 147 aa8.16□□□□□ -1.1
CALD1-210ENST00000443197 NUTF2P61970 127 aaKnown RBP8.16□□□□□ -1.1
CALD1-210ENST00000443197 TMEM97Q5BJF2 176 aa8.16□□□□□ -1.1
CALD1-210ENST00000443197 SCGB3A1Q96QR1 104 aa8.16□□□□□ -1.1
CALD1-210ENST00000443197 KLF12Q9Y4X4 402 aa8.16□□□□□ -1.1
CALD1-210ENST00000443197 TCF21O43680 179 aa8.16□□□□□ -1.1
CALD1-210ENST00000443197 Q8N6K4 173 aa8.16□□□□□ -1.1
CALD1-210ENST00000443197 CFAP46Q8IYW2 2715 aa8.16□□□□□ -1.1
CALD1-210ENST00000443197 LRBAP50851 2863 aa8.16□□□□□ -1.1
CALD1-210ENST00000443197 FAM104BQ5XKR9 115 aa8.16□□□□□ -1.1
CALD1-210ENST00000443197 FAM231BA6NCW3 169 aa8.15□□□□□ -1.1
CALD1-210ENST00000443197 GNRH2O43555 120 aa8.15□□□□□ -1.1
CALD1-210ENST00000443197 CHCHD1Q96BP2 118 aaKnown RBP8.15□□□□□ -1.1
CALD1-210ENST00000443197 PPBPP02775 128 aa8.15□□□□□ -1.1
CALD1-210ENST00000443197 MRPL51Q4U2R6 128 aaKnown RBP8.15□□□□□ -1.1
CALD1-210ENST00000443197 SAMD13Q5VXD3 122 aa8.15□□□□□ -1.1
CALD1-210ENST00000443197 TMEM190Q8WZ59 177 aa8.15□□□□□ -1.1
CALD1-210ENST00000443197 IFI27L1Q96BM0 104 aa8.15□□□□□ -1.1
CALD1-210ENST00000443197 MEGF9Q9H1U4 602 aa8.15□□□□□ -1.1
CALD1-210ENST00000443197 XCL2Q9UBD3 114 aa8.15□□□□□ -1.1
CALD1-210ENST00000443197 LINC01619G3V211 115 aa8.15□□□□□ -1.11
CALD1-210ENST00000443197 RPL35AP18077 110 aaKnown RBP8.15□□□□□ -1.11
CALD1-210ENST00000443197 IGHV4OR15-8A0A075B7B6 117 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 A0A087WW49 117 aa8.14□□□□□ -1.11
CALD1-210ENST00000443197 ELANEP08246 267 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms