RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 CSN1S1P47710 185 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 MEF2CQ06413 473 aaPredicted RBP4.98□□□□□ -1.61
HDAC6-210ENST00000441703 LTC4SQ16873 150 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 TRAT1Q6PIZ9 186 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 ZNF788Q6ZQV5 615 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 TTC9CQ8N5M4 171 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 ZNF502Q8TBZ5 544 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 TMEM190Q8WZ59 177 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 SLC25A33Q9BSK2 321 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 GEMIN7Q9H840 131 aaKnown RBP4.98□□□□□ -1.61
HDAC6-210ENST00000441703 THYN1Q9P016 225 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 TP73-AS1Q9UF72 201 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 POLDIP2Q9Y2S7 368 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 KLF12Q9Y4X4 402 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 DSCAML1Q8TD84 2053 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 ABCA13Q86UQ4 5058 aa4.98□□□□□ -1.61
HDAC6-210ENST00000441703 A0A1B0GW15 77 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 hADV38S2A0JD32 116 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 SRRM4A7MD48 611 aaKnown RBP4.97□□□□□ -1.61
HDAC6-210ENST00000441703 E9PLD3 99 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.97□□□□□ -1.61
HDAC6-210ENST00000441703 CCL24O00175 119 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 PEX7O00628 323 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 GRPP07492 148 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 COX7A1P24310 79 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 CEBPDP49716 269 aaPredicted RBP4.97□□□□□ -1.61
HDAC6-210ENST00000441703 CAMPP49913 170 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 FOXA3P55318 350 aaPredicted RBP4.97□□□□□ -1.61
HDAC6-210ENST00000441703 ERVK-16P61578 105 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 HSPE1P61604 102 aaKnown RBP4.97□□□□□ -1.61
HDAC6-210ENST00000441703 AESQ08117 197 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 SPINK9Q5DT21 86 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 PRAMEF5Q5TYX0 476 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 C10orf99Q6UWK7 81 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 RBPMS2Q6ZRY4 209 aaKnown RBP4.97□□□□□ -1.61
HDAC6-210ENST00000441703 C11orf53Q8IXP5 236 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 ABHD12Q8N2K0 398 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 ATP6V0E2Q8NHE4 81 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 ZNF479Q96JC4 524 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 ZNF488Q96MN9 340 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 DUX3Q96PT4 197 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 SPAG8Q99932 426 aaPredicted RBP4.97□□□□□ -1.61
HDAC6-210ENST00000441703 RTL8AQ9BWD3 113 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 VCX2Q9H322 139 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 RPP21Q9H633 154 aaKnown RBP4.97□□□□□ -1.61
HDAC6-210ENST00000441703 ZNF355PQ9NSJ1 428 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 PGPEP1Q9NXJ5 209 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 JPT1Q9UK76 154 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 FOXA2Q9Y261 457 aaPredicted RBP4.97□□□□□ -1.61
HDAC6-210ENST00000441703 CYSLTR1Q9Y271 337 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 AMMECR1Q9Y4X0 333 aaPredicted RBP4.97□□□□□ -1.61
HDAC6-210ENST00000441703 MUC4Q99102 2169 aa4.97□□□□□ -1.61
HDAC6-210ENST00000441703 C19orf71A6NCJ1 209 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 LINC00473A8K010 186 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 C12orf77C9JDV5 145 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 MGST3O14880 152 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 CA1P00915 261 aaPredicted RBP4.96□□□□□ -1.62
HDAC6-210ENST00000441703 CRYGCP07315 174 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 HLA-DRB4P13762 266 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 FOXE3Q13461 319 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 TAL2Q16559 108 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 C18orf65Q6ZTR6 163 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 WDR86Q86TI4 376 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 ZNF329Q86UD4 541 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 DYNAPQ8N1N2 210 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 OR9G1Q8NH87 305 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 PHLDA1Q8WV24 401 aaPredicted RBP4.96□□□□□ -1.62
HDAC6-210ENST00000441703 ZC2HC1AQ96GY0 325 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 COQ2Q96H96 371 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 FAM167A-AS1Q96KT0 104 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 GPR82Q96P67 336 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 GAFA1Q96PS6 74 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 MLST8Q9BVC4 326 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 ENY2Q9NPA8 101 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 SPANXA1Q9NS26 97 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 HLA-DRB4X5D2U9 266 aa4.96□□□□□ -1.62
HDAC6-210ENST00000441703 TRBV6-1A0A0K0K1D8 114 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 C15orf61A6NNL5 157 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 ODF3BA8MYP8 253 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 NPIPB6E9PJ23 425 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 CHEK1O14757 476 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 ACTL6BO94805 426 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 INSL3P51460 131 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 SSBP2P81877 361 aaPredicted RBP4.95□□□□□ -1.62
HDAC6-210ENST00000441703 RIGQ13278 110 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 POU2AF1Q16633 256 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 LINC01559Q495D7 138 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 C2orf83Q53S99 150 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 OR5AN1Q8NGI8 311 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 OR1L4Q8NGR5 311 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 CACNG8Q8WXS5 425 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 RAX2Q96IS3 184 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 ZNF714Q96N38 554 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 TM2D2Q9BX73 214 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 SLC25A2Q9BXI2 301 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 TMEM14BQ9NUH8 114 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 AP5S1Q9NUS5 200 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 ERG28Q9UKR5 140 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 EPDR1Q9UM22 224 aa4.95□□□□□ -1.62
HDAC6-210ENST00000441703 HILPDAQ9Y5L2 63 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms