RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ZFP30Q9Y2G7 519 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 SOX21Q9Y651 276 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 S4R3C0 116 aa2.59□□□□□ -1.99
HMGB3P11-201ENST00000440127 TET2Q6N021 2002 aaPredicted RBP2.59□□□□□ -2
HMGB3P11-201ENST00000440127 DSCAML1Q8TD84 2053 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 TRAV8-1A0A0A6YYK1 113 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 CENPVL3A0A0U1RRI6 287 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 SERTM2A0A1B0GWG4 89 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 A0A1B0GXF2 115 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 OR2T8A6NH00 312 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 HIGD1CA8MV81 97 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 A8MWP6 167 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 F2Z2F3 143 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 H0Y8G0 127 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 K7EQD1 137 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 NDUFS8O00217 210 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 NXPH4O95158 308 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV3-23P01764 117 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 GPX1P07203 203 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 DDTP30046 118 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 SAA4P35542 130 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 RAB9AP51151 201 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 FOXA3P55318 350 aaPredicted RBP2.58□□□□□ -2
HMGB3P11-201ENST00000440127 HBBP68871 147 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 NDPQ00604 133 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 ATP5G2Q06055 141 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 ECSCRQ19T08 205 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 SAPCD1Q5SSQ6 148 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 FAM162BQ5T6X4 162 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 GDF5OSQ5U4N7 250 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 TOMM20LQ6UXN7 152 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 LINC00322Q6ZN03 302 aaPredicted RBP2.58□□□□□ -2
HMGB3P11-201ENST00000440127 Q6ZRP5 223 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 TCF24Q7RTU0 167 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 Q86TA4 180 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 ZNF664Q8N3J9 261 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 OR2D3Q8NGH3 330 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 ZNF502Q8TBZ5 544 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 GTSF1Q8WW33 167 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 KCNS1Q96KK3 526 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 PGLYRP4Q96LB8 373 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 CCL19Q99731 98 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 HSPB9Q9BQS6 159 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 RABAC1Q9UI14 185 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 MOB4Q9Y3A3 225 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 ZFHX2Q9C0A1 2572 aaPredicted RBP2.58□□□□□ -2
HMGB3P11-201ENST00000440127 HCFC1P51610 2035 aa2.58□□□□□ -2
HMGB3P11-201ENST00000440127 CACNA1DQ01668 2161 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 TRAV26-1A0A087WT03 109 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 A0A087X002 238 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.57□□□□□ -2
HMGB3P11-201ENST00000440127 TRBV7-1A0A0A6YYK4 115 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV1-69DA0A0B4J2H0 117 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 A0A1B0GW15 77 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 TMEM189A5PLL7 270 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 KRTAP16-1A8MUX0 517 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 ZNF324O75467 553 aaPredicted RBP2.57□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV1-69P01742 117 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 IGF1P05019 195 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 CT45A10P0DMU9 189 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 PMCHP20382 165 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 CRIP1P50238 77 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 RHOGP84095 191 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 SLAQ13239 276 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 C15orf32Q32M92 178 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 C1orf194Q5T5A4 169 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 CYB5R2Q6BCY4 276 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 CLEC2AQ6UVW9 174 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 CLEC19AQ6UXS0 136 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 ADAMTSL5Q6ZMM2 481 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 NIT1Q86X76 327 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 C5orf56Q8N8D9 126 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 C18orf32Q8TCD1 76 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 C10orf105Q8TEF2 133 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 EEF1AKMT3Q96AZ1 226 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 BORCS7Q96B45 105 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 ZC2HC1AQ96GY0 325 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 C14orf144Q96I85 54 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 YLPM1P49750 1951 aaKnown RBP2.57□□□□□ -2
HMGB3P11-201ENST00000440127 CADP27708 2225 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 USF3Q68DE3 2245 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 FAM186AA6NE01 2351 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 TTC28Q96AY4 2481 aa2.57□□□□□ -2
HMGB3P11-201ENST00000440127 URB1O60287 2271 aaKnown RBP2.56□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV3OR16-10A0A075B7F0 116 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 LOC102724200A0A096LPH7 203 aaPredicted RBP2.56□□□□□ -2
HMGB3P11-201ENST00000440127 TRAV41A0A0B4J266 112 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV3-38A0A0C4DH36 116 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 A0A1B0GUT8 65 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 FAM223BA6NKX1 122 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 G3V318 75 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 M0R2Z0 102 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 M0R3E3 92 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 HSBP1O75506 76 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 RAB4AP20338 218 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 NTF3P20783 257 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 BMI1P35226 326 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 ATP5J2P56134 94 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 DSCR10P59022 87 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 RPS20P60866 119 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms