RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 SCGB1C2P0DMR2 95 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 MC5RP33032 325 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 ODF1Q14990 250 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 CEND1Q8N111 149 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 LINC00311Q8N616 119 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 TM2D2Q9BX73 214 aa6.7□□□□□ -1.34
HPS4-206ENST00000439453 TRBV25-1A0A075B6N4 114 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 ZNF562Q6V9R5 426 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 LYPD1Q8N2G4 141 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 RASL11BQ9BPW5 248 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 SHANK2-AS3Q9BTD1 123 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 HIVEP1P15822 2718 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 IGLL5B9A064 214 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 M0R3E3 92 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 SH2D1AO60880 128 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 CKS1BP61024 79 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 SPAG8Q99932 426 aaPredicted RBP6.69□□□□□ -1.34
HPS4-206ENST00000439453 K7EMI3 77 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 FCN3O75636 299 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 SH2D6Q7Z4S9 175 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 HIF1ANQ9NWT6 349 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 A0A1B0GWB2 263 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 H3BRN7 92 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 IGKCP01834 107 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 CNTFRP26992 372 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 LEPP41159 167 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 RAB9AP51151 201 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 TWIST1Q15672 202 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 DTX2Q86UW9 622 aa6.69□□□□□ -1.34
HPS4-206ENST00000439453 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.68□□□□□ -1.34
HPS4-206ENST00000439453 IGKV1-17P01599 117 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 CD3EP07766 207 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 EVI2AP22794 236 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 ETDBQ3ZM63 59 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 GTSCR1Q86UQ5 136 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 C8orf31Q8N9H6 132 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 ARPC1AQ92747 370 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 ZNF479Q96JC4 524 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 MAP1LC3AQ9H492 121 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 LOC107984156A0A0G2JMH3 177 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 VSTM5A8MXK1 200 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 H3BVH4 76 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 ARL17AQ8IVW1 177 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 UBTD1Q9HAC8 227 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 TEX22C9J3V5 150 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 H3BMG7 143 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 I3L2K1 104 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 CRYGBP07316 175 aa6.68□□□□□ -1.34
HPS4-206ENST00000439453 LINC01546A6NGU7 62 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 CCL8P80075 99 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 MTURNQ8N3F0 131 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 NUP37Q8NFH4 326 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 FOXC2Q99958 501 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 SIGLEC9Q9Y336 463 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 NPIPB5A8MRT5 1133 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 MRPS12O15235 138 aaKnown RBP6.67□□□□□ -1.34
HPS4-206ENST00000439453 SCGB2A1O75556 95 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 DPM2O94777 84 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 ADIPOQQ15848 244 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 C12orf74Q32Q52 190 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 KLF17Q5JT82 389 aaPredicted RBP6.67□□□□□ -1.34
HPS4-206ENST00000439453 ZC2HC1BQ5TFG8 222 aa6.67□□□□□ -1.34
HPS4-206ENST00000439453 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 HLA-DRB4P13762 266 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 GAGE13Q4V321 117 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 AMTNQ6UX39 209 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 SCGB1D4Q6XE38 83 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 ZNF502Q8TBZ5 544 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 RNF185Q96GF1 192 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 HIST1H4GQ99525 98 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 AAMDCQ9H7C9 122 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 HLA-DRB4X5D2U9 266 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 AGRNO00468 2067 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 PRSS47A8MTI9 375 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 GAS8-AS1O95177 125 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 EGR2P11161 476 aaPredicted RBP6.66□□□□□ -1.34
HPS4-206ENST00000439453 DEFB113Q30KQ7 82 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 TCTEX1D4Q5JR98 221 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 SRSF9Q13242 221 aaKnown RBP eCLIP6.66□□□□□ -1.34
HPS4-206ENST00000439453 TAL2Q16559 108 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 MAPKAPK5-AS1Q8N8E1 139 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 ZNF491Q8N8L2 437 aa6.66□□□□□ -1.34
HPS4-206ENST00000439453 NDUFB3O43676 98 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 ATP5LO75964 103 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 IGLC6P0CF74 106 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 INSL3P51460 131 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 LYPD2Q6UXB3 125 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 PPP1R27Q86WC6 154 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 RNF125Q96EQ8 232 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 NXT2Q9NPJ8 142 aaKnown RBP6.65□□□□□ -1.34
HPS4-206ENST00000439453 MSRB1Q9NZV6 116 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 PRO0461Q9UI25 63 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 MALRD1Q5VYJ5 2156 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 IGKV2-40A0A087WW87 121 aaPredicted RBP6.65□□□□□ -1.34
HPS4-206ENST00000439453 IGKV2D-40P01614 121 aaPredicted RBP6.65□□□□□ -1.34
HPS4-206ENST00000439453 IL4P05112 153 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 DLX6P56179 175 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 ATP5G2Q06055 141 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 LINC01559Q495D7 138 aa6.65□□□□□ -1.34
HPS4-206ENST00000439453 WFDC12Q8WWY7 111 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms