RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 C3orf56Q8N813 242 aa7.8□□□□□ -1.16
CDC42SE1-202ENST00000439374 ABCA2Q9BZC7 2435 aa7.79□□□□□ -1.16
CDC42SE1-202ENST00000439374 NBR2O15453 112 aa7.79□□□□□ -1.16
CDC42SE1-202ENST00000439374 LY6EQ16553 131 aa7.79□□□□□ -1.16
CDC42SE1-202ENST00000439374 RNF125Q96EQ8 232 aa7.79□□□□□ -1.16
CDC42SE1-202ENST00000439374 PSMB11A5LHX3 300 aa7.79□□□□□ -1.16
CDC42SE1-202ENST00000439374 GP9P14770 177 aa7.79□□□□□ -1.16
CDC42SE1-202ENST00000439374 RPL7P18124 248 aaKnown RBP7.79□□□□□ -1.16
CDC42SE1-202ENST00000439374 MRPL16Q9NX20 251 aaKnown RBP7.79□□□□□ -1.16
CDC42SE1-202ENST00000439374 MRPL35Q9NZE8 188 aaKnown RBP7.79□□□□□ -1.16
CDC42SE1-202ENST00000439374 PIP4P2Q8N4L2 257 aa7.78□□□□□ -1.16
CDC42SE1-202ENST00000439374 C7orf69Q9H7B7 122 aa7.78□□□□□ -1.16
CDC42SE1-202ENST00000439374 EPG5Q9HCE0 2579 aa7.78□□□□□ -1.16
CDC42SE1-202ENST00000439374 A0A096LNJ9 63 aa7.78□□□□□ -1.16
CDC42SE1-202ENST00000439374 EGR2P11161 476 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE1-202ENST00000439374 C16orf54Q6UWD8 224 aa7.78□□□□□ -1.16
CDC42SE1-202ENST00000439374 NDFIP1Q9BT67 221 aa7.78□□□□□ -1.16
CDC42SE1-202ENST00000439374 TRBV25-1A0A075B6N4 114 aa7.77□□□□□ -1.16
CDC42SE1-202ENST00000439374 RASL11AQ6T310 242 aa7.77□□□□□ -1.16
CDC42SE1-202ENST00000439374 BRD3OSQ6XYD6 125 aa7.77□□□□□ -1.16
CDC42SE1-202ENST00000439374 VMO1Q7Z5L0 202 aa7.77□□□□□ -1.16
CDC42SE1-202ENST00000439374 MAPKAPK5-AS1Q8N8E1 139 aa7.77□□□□□ -1.16
CDC42SE1-202ENST00000439374 MLST8Q9BVC4 326 aa7.77□□□□□ -1.16
CDC42SE1-202ENST00000439374 MAP1LC3AQ9H492 121 aa7.77□□□□□ -1.16
CDC42SE1-202ENST00000439374 C19orf71A6NCJ1 209 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 G3V318 75 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 J3QR89 54 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 IGKV1-17P01599 117 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 FGF6P10767 208 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 ZNF80P51504 273 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 NDPQ00604 133 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 TMEM30BQ3MIR4 351 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 CD300EQ496F6 205 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 SYT8Q8NBV8 401 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 OTORQ9NRC9 128 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 CLEC3BP05452 202 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 PRTN3P24158 256 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 SPANXN1Q5VSR9 72 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 CLEC19AQ6UXS0 136 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 NCOR1P1Q9H4R4 102 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 C21orf62Q9NYP8 219 aa7.77□□□□□ -1.17
CDC42SE1-202ENST00000439374 IGLV1-47P01700 117 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 TRGV3P03979 118 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 MFAP4P55083 255 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 ATP5IP56385 69 aaPredicted RBP7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 FAM104BQ5XKR9 115 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 TRGV9Q99603 122 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 SPAG8Q99932 426 aaPredicted RBP7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 PGPEP1Q9NXJ5 209 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 SS18L2Q9UHA2 77 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 IGHV3-11P01762 117 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 IGKCP01834 107 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 HLA-DRB4P13762 266 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 DLX6P56179 175 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 GAGE13Q4V321 117 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 DYNAPQ8N1N2 210 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 HLA-DRB4X5D2U9 266 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 A0A1B0GV72 72 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 TEX22C9J3V5 150 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 KLHL30-AS1Q8NEE0 82 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 PRSS22Q9GZN4 317 aa7.76□□□□□ -1.17
CDC42SE1-202ENST00000439374 LINC01548A6NM66 108 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 HAX1O00165 279 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 S100A4P26447 101 aaKnown RBP7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 PRAC2D3DTV9 90 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 HTN1P15515 57 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 KLRB1Q12918 225 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 Q1RN00 199 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 C5orf64Q2M2E5 130 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 UFSP1Q6NVU6 142 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 MYOZ3Q8TDC0 251 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 CRXO43186 299 aaPredicted RBP7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 SCGB2A1O75556 95 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 TNFRSF6BO95407 300 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 SMIM17P0DL12 118 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 SRD5A1P18405 259 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 NPC2P61916 151 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 CCDC144NLQ6NUI1 221 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 LINC00311Q8N616 119 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 BPESC1Q9GZL8 116 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 LINC00574Q9H8X3 128 aa7.75□□□□□ -1.17
CDC42SE1-202ENST00000439374 TRBV19A0A075B6N1 114 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 K7EIM0 57 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 IGKV3-20P01619 116 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 IGLV2-11P01706 119 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 SPINK8P0C7L1 97 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 ZFP36P26651 326 aaKnown RBP7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 TTC9CQ8N5M4 171 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 THAP8Q8NA92 274 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 OR4X2Q8NGF9 303 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 RAX2Q96IS3 184 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 GEMIN7Q9H840 131 aaKnown RBP7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 KAAG1Q9UBP8 84 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 FLNCQ14315 2725 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 JMJD1CQ15652 2540 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 ZNF462Q96JM2 2506 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 F5H697 171 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 GATA3P23771 443 aa7.74□□□□□ -1.17
CDC42SE1-202ENST00000439374 NBL1P41271 181 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms