RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 FAM162BQ5T6X4 162 aa11.2□□□□□ -0.62
TMEM40-204ENST00000435218 OR4B1Q8NGF8 309 aa11.2□□□□□ -0.62
TMEM40-204ENST00000435218 ASCL2Q99929 193 aa11.2□□□□□ -0.62
TMEM40-204ENST00000435218 ZFAND2AQ8N6M9 145 aa11.19□□□□□ -0.62
TMEM40-204ENST00000435218 DAZAP1Q96EP5 407 aaKnown RBP11.19□□□□□ -0.62
TMEM40-204ENST00000435218 FABP5P3A8MUU1 101 aa11.19□□□□□ -0.62
TMEM40-204ENST00000435218 ZNF705GA8MUZ8 300 aaPredicted RBP11.19□□□□□ -0.62
TMEM40-204ENST00000435218 KLLNB2CW77 178 aa11.19□□□□□ -0.62
TMEM40-204ENST00000435218 OR11H12B2RN74 326 aa11.19□□□□□ -0.62
TMEM40-204ENST00000435218 H3BMM0 161 aa11.19□□□□□ -0.62
TMEM40-204ENST00000435218 GATCO43716 136 aaKnown RBP11.19□□□□□ -0.62
TMEM40-204ENST00000435218 P01737 135 aa11.19□□□□□ -0.62
TMEM40-204ENST00000435218 ZNF80P51504 273 aaPredicted RBP11.19□□□□□ -0.62
TMEM40-204ENST00000435218 YPEL4Q96NS1 127 aa11.19□□□□□ -0.62
TMEM40-204ENST00000435218 RPP21Q9H633 154 aaKnown RBP11.19□□□□□ -0.62
TMEM40-204ENST00000435218 PFN1P07737 140 aaKnown RBP11.18□□□□□ -0.62
TMEM40-204ENST00000435218 AMTNQ6UX39 209 aa11.18□□□□□ -0.62
TMEM40-204ENST00000435218 IL36BQ9NZH7 164 aa11.18□□□□□ -0.62
TMEM40-204ENST00000435218 SH2D1AO60880 128 aa11.17□□□□□ -0.62
TMEM40-204ENST00000435218 LEPP41159 167 aa11.17□□□□□ -0.62
TMEM40-204ENST00000435218 ELOBQ15370 118 aa11.17□□□□□ -0.62
TMEM40-204ENST00000435218 Q6AWC8 147 aa11.17□□□□□ -0.62
TMEM40-204ENST00000435218 C19orf73Q9NVV2 129 aa11.17□□□□□ -0.62
TMEM40-204ENST00000435218 TRAV9-1A0A075B6T8 112 aa11.16□□□□□ -0.62
TMEM40-204ENST00000435218 SMIM27A0A1W2PRY6 76 aa11.16□□□□□ -0.62
TMEM40-204ENST00000435218 FAM231BA6NCW3 169 aa11.16□□□□□ -0.62
TMEM40-204ENST00000435218 KNCNA6PVL3 124 aa11.16□□□□□ -0.62
TMEM40-204ENST00000435218 A8MWL6 223 aa11.16□□□□□ -0.62
TMEM40-204ENST00000435218 S100PP25815 95 aa11.16□□□□□ -0.62
TMEM40-204ENST00000435218 TSPOP30536 169 aa11.16□□□□□ -0.62
TMEM40-204ENST00000435218 ACTL10Q5JWF8 245 aa11.16□□□□□ -0.62
TMEM40-204ENST00000435218 PRR9Q5T870 116 aa11.16□□□□□ -0.62
TMEM40-204ENST00000435218 KCNIP4Q6PIL6 250 aa11.16□□□□□ -0.62
TMEM40-204ENST00000435218 TRRAPQ9Y4A5 3859 aa11.16□□□□□ -0.62
TMEM40-204ENST00000435218 GPX1P07203 203 aa11.15□□□□□ -0.62
TMEM40-204ENST00000435218 CD7P09564 240 aa11.15□□□□□ -0.62
TMEM40-204ENST00000435218 CDKN1BP46527 198 aa11.15□□□□□ -0.62
TMEM40-204ENST00000435218 ZNF124Q15973 351 aa11.15□□□□□ -0.62
TMEM40-204ENST00000435218 TSKUQ8WUA8 353 aa11.15□□□□□ -0.62
TMEM40-204ENST00000435218 PYGO2Q9BRQ0 406 aa11.15□□□□□ -0.62
TMEM40-204ENST00000435218 GFRA4Q9GZZ7 299 aa11.15□□□□□ -0.62
TMEM40-204ENST00000435218 PKD1L1Q8TDX9 2849 aa11.15□□□□□ -0.62
TMEM40-204ENST00000435218 NOTCH3Q9UM47 2321 aa11.15□□□□□ -0.63
TMEM40-204ENST00000435218 TRBV24-1A0A075B6N3 115 aa11.14□□□□□ -0.63
TMEM40-204ENST00000435218 TRAV21A0A0B4J279 112 aa11.14□□□□□ -0.63
TMEM40-204ENST00000435218 COLCA2A8K830 154 aa11.14□□□□□ -0.63
TMEM40-204ENST00000435218 IGLL1P15814 213 aa11.14□□□□□ -0.63
TMEM40-204ENST00000435218 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
TMEM40-204ENST00000435218 BTF3L4Q96K17 158 aa11.14□□□□□ -0.63
TMEM40-204ENST00000435218 RPS20P60866 119 aaKnown RBP11.14□□□□□ -0.63
TMEM40-204ENST00000435218 PRR31Q5SQ13 230 aa11.14□□□□□ -0.63
TMEM40-204ENST00000435218 TRPT1Q86TN4 253 aaKnown RBP11.14□□□□□ -0.63
TMEM40-204ENST00000435218 OR2D3Q8NGH3 330 aa11.14□□□□□ -0.63
TMEM40-204ENST00000435218 URGCP-MRPS24S4R325 110 aa11.14□□□□□ -0.63
TMEM40-204ENST00000435218 ANK2Q01484 3957 aa11.13□□□□□ -0.63
TMEM40-204ENST00000435218 XKRY2A2RUG3 117 aa11.13□□□□□ -0.63
TMEM40-204ENST00000435218 TMEM189A5PLL7 270 aa11.13□□□□□ -0.63
TMEM40-204ENST00000435218 CA1P00915 261 aaPredicted RBP11.13□□□□□ -0.63
TMEM40-204ENST00000435218 CXCL1P09341 107 aa11.13□□□□□ -0.63
TMEM40-204ENST00000435218 FOXA3P55318 350 aaPredicted RBP11.13□□□□□ -0.63
TMEM40-204ENST00000435218 RIPPLY3P57055 190 aa11.13□□□□□ -0.63
TMEM40-204ENST00000435218 STHQ8IWL8 128 aa11.13□□□□□ -0.63
TMEM40-204ENST00000435218 MDFIQ99750 246 aa11.13□□□□□ -0.63
TMEM40-204ENST00000435218 C7orf71A4D174 169 aa11.12□□□□□ -0.63
TMEM40-204ENST00000435218 RBMY1BA6NDE4 496 aaKnown RBP11.12□□□□□ -0.63
TMEM40-204ENST00000435218 RBMY1EA6NEQ0 496 aaKnown RBP11.12□□□□□ -0.63
TMEM40-204ENST00000435218 RBMY1DP0C7P1 496 aaKnown RBP11.12□□□□□ -0.63
TMEM40-204ENST00000435218 FAM3BP58499 235 aaPredicted RBP11.12□□□□□ -0.63
TMEM40-204ENST00000435218 GTSCR1Q86UQ5 136 aa11.12□□□□□ -0.63
TMEM40-204ENST00000435218 NAT8BQ9UHF3 227 aa11.12□□□□□ -0.63
TMEM40-204ENST00000435218 A0A1W2PPQ1 181 aa11.11□□□□□ -0.63
TMEM40-204ENST00000435218 IGKV3-20P01619 116 aa11.11□□□□□ -0.63
TMEM40-204ENST00000435218 AMBPP02760 352 aa11.11□□□□□ -0.63
TMEM40-204ENST00000435218 RNASE4P34096 147 aaKnown RBP11.11□□□□□ -0.63
TMEM40-204ENST00000435218 KIR3DS1Q14943 382 aa11.11□□□□□ -0.63
TMEM40-204ENST00000435218 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
TMEM40-204ENST00000435218 GFI1BQ5VTD9 330 aa11.11□□□□□ -0.63
TMEM40-204ENST00000435218 NEU1Q99519 415 aa11.11□□□□□ -0.63
TMEM40-204ENST00000435218 C11orf21Q9P2W6 132 aa11.11□□□□□ -0.63
TMEM40-204ENST00000435218 IGKV3D-20A0A0C4DH25 116 aa11.1□□□□□ -0.63
TMEM40-204ENST00000435218 HIGD1CA8MV81 97 aa11.1□□□□□ -0.63
TMEM40-204ENST00000435218 M0R2Z0 102 aa11.1□□□□□ -0.63
TMEM40-204ENST00000435218 ZNF324O75467 553 aaPredicted RBP11.1□□□□□ -0.63
TMEM40-204ENST00000435218 ORM1P02763 201 aa11.1□□□□□ -0.63
TMEM40-204ENST00000435218 TYMSP04818 313 aa11.1□□□□□ -0.63
TMEM40-204ENST00000435218 RPL19P84098 196 aaKnown RBP11.1□□□□□ -0.63
TMEM40-204ENST00000435218 ZNF575Q86XF7 245 aa11.1□□□□□ -0.63
TMEM40-204ENST00000435218 GTSF1Q8WW33 167 aa11.1□□□□□ -0.63
TMEM40-204ENST00000435218 C20orf144Q9BQM9 153 aa11.1□□□□□ -0.63
TMEM40-204ENST00000435218 TGIF2-C20orf24A0A0A6YYL0 155 aa11.09□□□□□ -0.63
TMEM40-204ENST00000435218 J3KRW8 73 aa11.09□□□□□ -0.63
TMEM40-204ENST00000435218 CRXO43186 299 aaPredicted RBP11.09□□□□□ -0.63
TMEM40-204ENST00000435218 TDRG1Q3Y452 100 aa11.09□□□□□ -0.63
TMEM40-204ENST00000435218 NUP35Q8NFH5 326 aa11.09□□□□□ -0.63
TMEM40-204ENST00000435218 IGLC6P0CF74 106 aa11.09□□□□□ -0.63
TMEM40-204ENST00000435218 NUTF2P61970 127 aaKnown RBP11.09□□□□□ -0.63
TMEM40-204ENST00000435218 EGFEM1PQ0D2K5 195 aa11.09□□□□□ -0.63
TMEM40-204ENST00000435218 DNLZQ5SXM8 178 aa11.09□□□□□ -0.63
TMEM40-204ENST00000435218 Q6ZQT7 251 aa11.09□□□□□ -0.63
TMEM40-204ENST00000435218 FAM210BQ96KR6 192 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms