RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 HIVEP2P31629 2446 aa9.39□□□□□ -0.91
CLDN4-203ENST00000435050 AGPAT4-IT1Q9H0P7 198 aa9.39□□□□□ -0.91
CLDN4-203ENST00000435050 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.39□□□□□ -0.91
CLDN4-203ENST00000435050 DUX3Q96PT4 197 aa9.39□□□□□ -0.91
CLDN4-203ENST00000435050 PHLDA3Q9Y5J5 127 aa9.39□□□□□ -0.91
CLDN4-203ENST00000435050 DCHS2Q6V1P9 2916 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 TDRG1Q3Y452 100 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 RASL11AQ6T310 242 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 POLR3KQ9Y2Y1 108 aaPredicted RBP9.38□□□□□ -0.91
CLDN4-203ENST00000435050 SMAD5-AS1Q9Y6J3 95 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 VWC2LB2RUY7 222 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 GATA3P23771 443 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 VAMP3Q15836 100 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 PSMG4Q5JS54 123 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 TP53TG3Q9ULZ0 132 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 FAM181BA6NEQ2 426 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 SMIM17P0DL12 118 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
CLDN4-203ENST00000435050 ORMDL3Q8N138 153 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 KLHDC1Q8N7A1 406 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 AJUBAQ96IF1 538 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 AP1S3Q96PC3 154 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 YAE1D1Q9NRH1 226 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 CT83Q5H943 113 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 Q6AWC8 147 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 DYNLRB2Q8TF09 96 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 MBD6Q96DN6 1003 aa9.38□□□□□ -0.91
CLDN4-203ENST00000435050 A6NDX4 124 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 IGLV2-11P01706 119 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 PRSS1P07477 247 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 FOXE3Q13461 319 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 DEFB113Q30KQ7 82 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 TMEM70Q9BUB7 260 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 DAZ1Q9NQZ3 744 aaKnown RBP9.37□□□□□ -0.91
CLDN4-203ENST00000435050 MSRB1Q9NZV6 116 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 ZNF80P51504 273 aaPredicted RBP9.37□□□□□ -0.91
CLDN4-203ENST00000435050 DEFB136Q30KP8 78 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 IGHG2P01859 326 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 CRIP1P50238 77 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 GFRA4Q9GZZ7 299 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 HSPB8Q9UJY1 196 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 C2CD3Q4AC94 2353 aa9.37□□□□□ -0.91
CLDN4-203ENST00000435050 EBLN2Q6P2I7 272 aa9.36□□□□□ -0.91
CLDN4-203ENST00000435050 C9orf139Q6ZV77 190 aa9.36□□□□□ -0.91
CLDN4-203ENST00000435050 ZFAND3Q9H8U3 227 aa9.36□□□□□ -0.91
CLDN4-203ENST00000435050 ZNF48Q96MX3 618 aaPredicted RBP9.36□□□□□ -0.91
CLDN4-203ENST00000435050 TMEM238LA0A1B0GVL6 79 aa9.36□□□□□ -0.91
CLDN4-203ENST00000435050 NDUFA4O00483 81 aa9.36□□□□□ -0.91
CLDN4-203ENST00000435050 FAM74A4Q5TZK3 123 aa9.36□□□□□ -0.91
CLDN4-203ENST00000435050 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
CLDN4-203ENST00000435050 PIFOQ8TCI5 191 aa9.36□□□□□ -0.91
CLDN4-203ENST00000435050 WIPF2Q8TF74 440 aaPredicted RBP9.36□□□□□ -0.91
CLDN4-203ENST00000435050 MEGF9Q9H1U4 602 aa9.36□□□□□ -0.91
CLDN4-203ENST00000435050 OR4C46A6NHA9 309 aa9.35□□□□□ -0.91
CLDN4-203ENST00000435050 IFI27P40305 119 aaPredicted RBP9.35□□□□□ -0.91
CLDN4-203ENST00000435050 CRYBG3Q68DQ2 2970 aa9.35□□□□□ -0.91
CLDN4-203ENST00000435050 SNAI2O43623 268 aa9.35□□□□□ -0.91
CLDN4-203ENST00000435050 MAP1LC3AQ9H492 121 aa9.35□□□□□ -0.91
CLDN4-203ENST00000435050 JMJD1CQ15652 2540 aa9.35□□□□□ -0.91
CLDN4-203ENST00000435050 DLEU1O43261 78 aa9.35□□□□□ -0.91
CLDN4-203ENST00000435050 C1orf194Q5T5A4 169 aa9.35□□□□□ -0.91
CLDN4-203ENST00000435050 SNRPD3P62318 126 aaKnown RBP9.34□□□□□ -0.91
CLDN4-203ENST00000435050 FAM159AQ6UWV7 190 aa9.34□□□□□ -0.91
CLDN4-203ENST00000435050 FBLL1A6NHQ2 334 aaKnown RBP9.34□□□□□ -0.91
CLDN4-203ENST00000435050 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
CLDN4-203ENST00000435050 LINC00173Q6ZV60 143 aa9.34□□□□□ -0.91
CLDN4-203ENST00000435050 NDUFAF3Q9BU61 184 aa9.34□□□□□ -0.91
CLDN4-203ENST00000435050 TRAV12-3A0A0B4J271 114 aa9.33□□□□□ -0.92
CLDN4-203ENST00000435050 MRPS12O15235 138 aaKnown RBP9.33□□□□□ -0.92
CLDN4-203ENST00000435050 NPSP0C0P6 89 aa9.33□□□□□ -0.92
CLDN4-203ENST00000435050 PRSS57Q6UWY2 283 aa9.33□□□□□ -0.92
CLDN4-203ENST00000435050 IGHV3OR16-12A0A075B7B8 117 aa9.33□□□□□ -0.92
CLDN4-203ENST00000435050 ASIPP42127 132 aa9.33□□□□□ -0.92
CLDN4-203ENST00000435050 C2orf88Q9BSF0 95 aa9.33□□□□□ -0.92
CLDN4-203ENST00000435050 VPREB3Q9UKI3 123 aa9.33□□□□□ -0.92
CLDN4-203ENST00000435050 IGF1P05019 195 aa9.33□□□□□ -0.92
CLDN4-203ENST00000435050 CD7P09564 240 aa9.33□□□□□ -0.92
CLDN4-203ENST00000435050 HINT1P49773 126 aaPredicted RBP9.33□□□□□ -0.92
CLDN4-203ENST00000435050 TMEM208Q9BTX3 173 aa9.33□□□□□ -0.92
CLDN4-203ENST00000435050 UTP20O75691 2785 aaKnown RBP9.33□□□□□ -0.92
CLDN4-203ENST00000435050 FN1P02751 2386 aaKnown RBP9.33□□□□□ -0.92
CLDN4-203ENST00000435050 TRAV26-2A0A0B4J265 109 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 IGHV7-4-1A0A0J9YVY3 117 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 A0A1B0GW15 77 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 SCGB2A2Q13296 93 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 CITED1Q99966 193 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 HECTD1Q9ULT8 2610 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 TRAV21A0A0B4J279 112 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 OVOL1O14753 267 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 LINC00310P59036 64 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 MRPL51Q4U2R6 128 aaKnown RBP9.32□□□□□ -0.92
CLDN4-203ENST00000435050 WFDC11Q8NEX6 87 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 hDV102S1A0JD36 115 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 GATA1P15976 413 aaPredicted RBP9.32□□□□□ -0.92
CLDN4-203ENST00000435050 EDN2P20800 178 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 FAM104BQ5XKR9 115 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 RNF114Q9Y508 228 aa9.32□□□□□ -0.92
CLDN4-203ENST00000435050 TRAV12-2A0A075B6T6 113 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms