RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 SMIM13P0DJ93 91 aa9.7□□□□□ -0.86
CDH3-202ENST00000429102 NEGR1Q7Z3B1 354 aa9.7□□□□□ -0.86
CDH3-202ENST00000429102 VMO1Q7Z5L0 202 aa9.7□□□□□ -0.86
CDH3-202ENST00000429102 WNK1Q9H4A3 2382 aa9.7□□□□□ -0.86
CDH3-202ENST00000429102 LOC107984156A0A0G2JMH3 177 aa9.7□□□□□ -0.86
CDH3-202ENST00000429102 TMEM8BA6NDV4 472 aa9.7□□□□□ -0.86
CDH3-202ENST00000429102 H3BVH4 76 aa9.7□□□□□ -0.86
CDH3-202ENST00000429102 CTSGP08311 255 aa9.7□□□□□ -0.86
CDH3-202ENST00000429102 ARL17AQ8IVW1 177 aa9.7□□□□□ -0.86
CDH3-202ENST00000429102 SMAD5-AS1Q9Y6J3 95 aa9.7□□□□□ -0.86
CDH3-202ENST00000429102 IGHV3-11P01762 117 aa9.69□□□□□ -0.86
CDH3-202ENST00000429102 MGPP08493 103 aa9.69□□□□□ -0.86
CDH3-202ENST00000429102 CEACAM3P40198 252 aa9.69□□□□□ -0.86
CDH3-202ENST00000429102 SH2D6Q7Z4S9 175 aa9.69□□□□□ -0.86
CDH3-202ENST00000429102 DTX2Q86UW9 622 aa9.69□□□□□ -0.86
CDH3-202ENST00000429102 ZNF502Q8TBZ5 544 aa9.69□□□□□ -0.86
CDH3-202ENST00000429102 FABP5P3A8MUU1 101 aa9.69□□□□□ -0.86
CDH3-202ENST00000429102 H7C2G1 150 aa9.69□□□□□ -0.86
CDH3-202ENST00000429102 OVOL3O00110 214 aa9.69□□□□□ -0.86
CDH3-202ENST00000429102 S100A4P26447 101 aaKnown RBP9.69□□□□□ -0.86
CDH3-202ENST00000429102 CSTL1Q9H114 145 aa9.69□□□□□ -0.86
CDH3-202ENST00000429102 FGF6P10767 208 aa9.68□□□□□ -0.86
CDH3-202ENST00000429102 BMI1P35226 326 aa9.68□□□□□ -0.86
CDH3-202ENST00000429102 C3orf36Q3SXR2 165 aa9.68□□□□□ -0.86
CDH3-202ENST00000429102 ETDBQ3ZM63 59 aa9.68□□□□□ -0.86
CDH3-202ENST00000429102 MRPL35Q9NZE8 188 aaKnown RBP9.68□□□□□ -0.86
CDH3-202ENST00000429102 ZFYVE26Q68DK2 2539 aa9.68□□□□□ -0.86
CDH3-202ENST00000429102 TEX48A0A1B0GUV7 120 aa9.68□□□□□ -0.86
CDH3-202ENST00000429102 C9orf118A6NHY6 69 aa9.68□□□□□ -0.86
CDH3-202ENST00000429102 SCGB1D4Q6XE38 83 aa9.68□□□□□ -0.86
CDH3-202ENST00000429102 ZNF418Q8TF45 676 aaPredicted RBP9.68□□□□□ -0.86
CDH3-202ENST00000429102 RAB1BQ9H0U4 201 aa9.68□□□□□ -0.86
CDH3-202ENST00000429102 TMEM238C9JI98 176 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 F8W735 103 aaPredicted RBP9.67□□□□□ -0.86
CDH3-202ENST00000429102 ZFP36P26651 326 aaKnown RBP9.67□□□□□ -0.86
CDH3-202ENST00000429102 SEC11AP67812 179 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 LY6EQ16553 131 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 H3BMG7 143 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 MRPS12O15235 138 aaKnown RBP9.67□□□□□ -0.86
CDH3-202ENST00000429102 C11orf21Q9P2W6 132 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 MYO18BQ8IUG5 2567 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 CSMD2Q7Z408 3487 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 IGLV11-55A0A075B6I3 123 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 F6UB75 175 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 ATP6V0E1O15342 81 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 IGKV3-20P01619 116 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 SMIM17P0DL12 118 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 PAX2Q02962 417 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 HSD52Q0P140 79 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 TNFRSF14Q92956 283 aa9.67□□□□□ -0.86
CDH3-202ENST00000429102 TMEM78Q5T7P6 136 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 SAMD13Q5VXD3 122 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 ZNF562Q6V9R5 426 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 ADAMTSL5Q6ZMM2 481 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 BOD1L2Q8IYS8 172 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 MYOZ3Q8TDC0 251 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 C16orf92Q96LL3 132 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 AGPAT4-IT1Q9H0P7 198 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 CYSLTR1Q9Y271 337 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 WI2-2373I1.2A0A1W2PRP0 233 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 APOMO95445 188 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 LGALS9BQ3B8N2 356 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 LGALS9CQ6DKI2 356 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 CHAC1Q9BUX1 264 aa9.66□□□□□ -0.86
CDH3-202ENST00000429102 SONP18583 2426 aaKnown RBP9.66□□□□□ -0.86
CDH3-202ENST00000429102 IGKCP01834 107 aa9.65□□□□□ -0.86
CDH3-202ENST00000429102 SRSF9Q13242 221 aaKnown RBP eCLIP9.65□□□□□ -0.86
CDH3-202ENST00000429102 Q6AWC8 147 aa9.65□□□□□ -0.86
CDH3-202ENST00000429102 BRD3OSQ6XYD6 125 aa9.65□□□□□ -0.86
CDH3-202ENST00000429102 CELSR2Q9HCU4 2923 aa9.65□□□□□ -0.86
CDH3-202ENST00000429102 MAPKAPK5-AS1Q8N8E1 139 aa9.65□□□□□ -0.86
CDH3-202ENST00000429102 C8orf31Q8N9H6 132 aa9.65□□□□□ -0.86
CDH3-202ENST00000429102 C14orf178Q8N769 122 aaPredicted RBP9.65□□□□□ -0.86
CDH3-202ENST00000429102 IGHV7-81A0A0B4J1V7 117 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 IGKV3D-20A0A0C4DH25 116 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 IGHG4P01861 327 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 WFDC2Q14508 124 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 RNF185Q96GF1 192 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 TSSC4Q9Y5U2 329 aaPredicted RBP9.64□□□□□ -0.87
CDH3-202ENST00000429102 A0A1B0GWB2 263 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 A0A1W2PPM0 123 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 LY6LH3BQJ8 138 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 H3BRM9 83 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 LYPD1Q8N2G4 141 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 VKORC1Q9BQB6 163 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 TRBV25-1A0A075B6N4 114 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 K7EP34 96 aa9.64□□□□□ -0.87
CDH3-202ENST00000429102 F5H697 171 aa9.63□□□□□ -0.87
CDH3-202ENST00000429102 HOXB4P17483 251 aaPredicted RBP9.63□□□□□ -0.87
CDH3-202ENST00000429102 HTN1P15515 57 aa9.63□□□□□ -0.87
CDH3-202ENST00000429102 UTP20O75691 2785 aaKnown RBP9.63□□□□□ -0.87
CDH3-202ENST00000429102 A0A1B0GW15 77 aa9.63□□□□□ -0.87
CDH3-202ENST00000429102 ODF1Q14990 250 aa9.63□□□□□ -0.87
CDH3-202ENST00000429102 ZNF479Q96JC4 524 aa9.63□□□□□ -0.87
CDH3-202ENST00000429102 ZNF493Q6ZR52 646 aa9.62□□□□□ -0.87
CDH3-202ENST00000429102 RPL39LQ96EH5 51 aaKnown RBP9.62□□□□□ -0.87
CDH3-202ENST00000429102 PRTN3P24158 256 aa9.62□□□□□ -0.87
CDH3-202ENST00000429102 ZANQ9Y493 2812 aa9.62□□□□□ -0.87
CDH3-202ENST00000429102 DPM2O94777 84 aa9.62□□□□□ -0.87
CDH3-202ENST00000429102 SCGB1C2P0DMR2 95 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms