RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 TM2D3Q9BRN9 247 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 GFRA4Q9GZZ7 299 aa6.54□□□□□ -1.36
HDAC1-202ENST00000428704 RNASE7Q9H1E1 156 aaKnown RBP6.54□□□□□ -1.36
HDAC1-202ENST00000428704 IGHV4OR15-8A0A075B7B6 117 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 A0A087WW49 117 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 TRAV34A0A0B4J273 112 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 ZNF705GA8MUZ8 300 aaPredicted RBP6.53□□□□□ -1.36
HDAC1-202ENST00000428704 NPIPB6E9PJ23 425 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 K7EQM0 130 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 BMPR1BO00238 502 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 IGHV3-11P01762 117 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 MGST1P10620 155 aaKnown RBP6.53□□□□□ -1.36
HDAC1-202ENST00000428704 ESDP10768 282 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 SLURP1P55000 103 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 FOXA3P55318 350 aaPredicted RBP6.53□□□□□ -1.36
HDAC1-202ENST00000428704 TPPP2P59282 170 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 GNG5P63218 68 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 RHOGP84095 191 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 Q0VG73 95 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 C15orf32Q32M92 178 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 C1orf194Q5T5A4 169 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 C16orf54Q6UWD8 224 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 OR8I2Q8N0Y5 310 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 OR4B1Q8NGF8 309 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 TSKUQ8WUA8 353 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 EEF1AKMT3Q96AZ1 226 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 MS4A10Q96PG2 267 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 RABAC1Q9UI14 185 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 KMT2AQ03164 3969 aa6.53□□□□□ -1.36
HDAC1-202ENST00000428704 A0A087X0K7 114 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 XKRY2A2RUG3 117 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 A8MWL6 223 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 HLA-DQA1P01909 254 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 TRGV3P03979 118 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 CLEC3BP05452 202 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 GFI1BQ5VTD9 330 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 TOMM20LQ6UXN7 152 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 ATP5L2Q7Z4Y8 100 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 DLX4Q92988 240 aaPredicted RBP6.52□□□□□ -1.37
HDAC1-202ENST00000428704 USMG5Q96IX5 58 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 PACRGQ96M98 296 aaPredicted RBP6.52□□□□□ -1.37
HDAC1-202ENST00000428704 HIST1H2BLQ99880 126 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 AAMDCQ9H7C9 122 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 NAT8BQ9UHF3 227 aa6.52□□□□□ -1.37
HDAC1-202ENST00000428704 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
HDAC1-202ENST00000428704 OR2T8A6NH00 312 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 DIRC3C9JPN6 131 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 LINC01619G3V211 115 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 OVOL1O14753 267 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 BUB3O43684 328 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 RELQ04864 619 aaPredicted RBP6.51□□□□□ -1.37
HDAC1-202ENST00000428704 ATP5G2Q06055 141 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 PSG3Q16557 428 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 TMEM136Q6ZRR5 245 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 Q86TA4 180 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 EXOC3-AS1Q8N2X6 119 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 C17orf77Q96MU5 243 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 S4R3C0 116 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 UBR4Q5T4S7 5183 aa6.51□□□□□ -1.37
HDAC1-202ENST00000428704 ZNF785A8K8V0 405 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 SNURFLB1AK76 121 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 AMBPP02760 352 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 GPR183P32249 361 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 CSN1S1P47710 185 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 JOSD1Q15040 202 aaPredicted RBP6.5□□□□□ -1.37
HDAC1-202ENST00000428704 PYY3Q5JQD4 70 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 OR10J3Q5JRS4 329 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 FAM209BQ5JX69 171 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 LINC00322Q6ZN03 302 aaPredicted RBP6.5□□□□□ -1.37
HDAC1-202ENST00000428704 GOLT1AQ6ZVE7 132 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 NUP35Q8NFH5 326 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 OR10D4PQ8NGN7 298 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 TMEM18Q96B42 140 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 DAZAP1Q96EP5 407 aaKnown RBP6.5□□□□□ -1.37
HDAC1-202ENST00000428704 SPATA25Q9BR10 227 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 RPP21Q9H633 154 aaKnown RBP6.5□□□□□ -1.37
HDAC1-202ENST00000428704 ZNF331Q9NQX6 463 aaPredicted RBP6.5□□□□□ -1.37
HDAC1-202ENST00000428704 CLEC5AQ9NY25 188 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 PSG8Q9UQ74 426 aa6.5□□□□□ -1.37
HDAC1-202ENST00000428704 A0A1B0GXF2 115 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 RBAKDNA6NC62 111 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 H3BTX0 84 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 TRBV12-3P01733 135 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 P01737 135 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 SNRPCP09234 159 aaKnown RBP6.49□□□□□ -1.37
HDAC1-202ENST00000428704 CRISP2P16562 243 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 CBLN1P23435 193 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 PAFAH1B2P68402 229 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 SAPCD1Q5SSQ6 148 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 CLEC19AQ6UXS0 136 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 GBGT1Q8N5D6 347 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 NHLRC2Q8NBF2 726 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 MRPL53Q96EL3 112 aaKnown RBP6.49□□□□□ -1.37
HDAC1-202ENST00000428704 NEU1Q99519 415 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 SLC50A1Q9BRV3 221 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 NIT2Q9NQR4 276 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 PPP1R14DQ9NXH3 145 aa6.49□□□□□ -1.37
HDAC1-202ENST00000428704 DNAH11Q96DT5 4516 aa6.48□□□□□ -1.37
HDAC1-202ENST00000428704 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms