RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 C5orf17Q8NAS9 161 aa5.35□□□□□ -1.55
LINC01049-201ENST00000426840 CMTM2Q8TAZ6 248 aa5.35□□□□□ -1.55
LINC01049-201ENST00000426840 NEU1Q99519 415 aa5.35□□□□□ -1.55
LINC01049-201ENST00000426840 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
LINC01049-201ENST00000426840 COL7A1Q02388 2944 aa5.35□□□□□ -1.55
LINC01049-201ENST00000426840 TRBV7-9A0A0J9YWB2 115 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 KLLNB2CW77 178 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 ZNF324O75467 553 aaPredicted RBP5.34□□□□□ -1.55
LINC01049-201ENST00000426840 IGLV2-11P01706 119 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 NMBP08949 121 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 TSPOP30536 169 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 LEPP41159 167 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 ZNF138P52744 262 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 PMS2P11Q13670 270 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 TMEM78Q5T7P6 136 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 ZFAND2AQ8N6M9 145 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 Q8NAQ8 132 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 TVP23CQ96ET8 276 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 KRTAP4-2Q9BYR5 136 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 NKX6-2Q9C056 277 aaPredicted RBP5.34□□□□□ -1.55
LINC01049-201ENST00000426840 RPH3ALQ9UNE2 315 aa5.34□□□□□ -1.55
LINC01049-201ENST00000426840 IGHV3OR16-12A0A075B7B8 117 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 TRAV8-1A0A0A6YYK1 113 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 IGHV4-28A0A0C4DH34 117 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 A0A0J9YWU9 116 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 SERTM2A0A1B0GWG4 89 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 SMIM9A6NGZ8 99 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 J3KRW8 73 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 IFNA7P01567 189 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 HBE1P02100 147 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 PRM2P04554 102 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 MIFP14174 115 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 AZU1P20160 251 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 ATP5G3P48201 142 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 PRR9Q5T870 116 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 GFI1BQ5VTD9 330 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 CST9LP1Q5W188 147 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 Q6ZQT7 251 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 LYPD6BQ8NI32 183 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 Q8TAT8 98 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 SGK494Q96LW2 274 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 LINC00479Q96M42 142 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 C20orf144Q9BQM9 153 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 GOLT1BQ9Y3E0 138 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 LENEPQ9Y5L5 61 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 ARL2-SNX15V9GYD0 113 aa5.33□□□□□ -1.56
LINC01049-201ENST00000426840 TRAV12-3A0A0B4J271 114 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 TRAV34A0A0B4J273 112 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 C7orf71A4D174 169 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 ZNF705GA8MUZ8 300 aaPredicted RBP5.32□□□□□ -1.56
LINC01049-201ENST00000426840 PEX7O00628 323 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 DEFB4AO15263 64 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 INSP01308 110 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 GPX1P07203 203 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 RNASE4P34096 147 aaKnown RBP5.32□□□□□ -1.56
LINC01049-201ENST00000426840 PPT1P50897 306 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 BLOC1S1P78537 153 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 BTN1A1Q13410 526 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 TEX261Q6UWH6 196 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 CYB561D1Q8N8Q1 229 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 TMEM75Q8N9X5 138 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 HIST1H2BAQ96A08 127 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 LINC01587Q99440 93 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 ATG101Q9BSB4 218 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 GNG13Q9P2W3 67 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 PSG8Q9UQ74 426 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 KLF12Q9Y4X4 402 aa5.32□□□□□ -1.56
LINC01049-201ENST00000426840 STAB2Q8WWQ8 2551 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 FBLL1A6NHQ2 334 aaKnown RBP5.31□□□□□ -1.56
LINC01049-201ENST00000426840 F6UZH7 168 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 TEX46H3BTG2 121 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 H7BYZ3 331 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 K7EQM0 130 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 TAS2R60P59551 318 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 FLI1Q01543 452 aaPredicted RBP5.31□□□□□ -1.56
LINC01049-201ENST00000426840 RRN3P1Q2M238 152 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 PRNTQ86SH4 94 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 TMEM256Q8N2U0 113 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 ZNF680Q8NEM1 530 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 LINC00467Q9BRT7 94 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 TCEAL7Q9BRU2 100 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 TMEM208Q9BTX3 173 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 C11orf68Q9H3H3 251 aaKnown RBP5.31□□□□□ -1.56
LINC01049-201ENST00000426840 TREM1Q9NP99 234 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 MANBALQ9NQG1 85 aa5.31□□□□□ -1.56
LINC01049-201ENST00000426840 TRBV6-1A0A0K0K1D8 114 aa5.3□□□□□ -1.56
LINC01049-201ENST00000426840 LOC102723971A0A1B0GUV8 181 aa5.3□□□□□ -1.56
LINC01049-201ENST00000426840 PLAC8L1A1L4L8 177 aa5.3□□□□□ -1.56
LINC01049-201ENST00000426840 C11orf94C9JXX5 98 aa5.3□□□□□ -1.56
LINC01049-201ENST00000426840 ZNF80P51504 273 aaPredicted RBP5.3□□□□□ -1.56
LINC01049-201ENST00000426840 TMEM183BQ1AE95 376 aa5.3□□□□□ -1.56
LINC01049-201ENST00000426840 Q6AWC8 147 aa5.3□□□□□ -1.56
LINC01049-201ENST00000426840 IL17DQ8TAD2 202 aa5.3□□□□□ -1.56
LINC01049-201ENST00000426840 C2CD4CQ8TF44 421 aa5.3□□□□□ -1.56
LINC01049-201ENST00000426840 TXNDC17Q9BRA2 123 aa5.3□□□□□ -1.56
LINC01049-201ENST00000426840 PYGO2Q9BRQ0 406 aa5.3□□□□□ -1.56
LINC01049-201ENST00000426840 NIPSNAP3BQ9BS92 247 aa5.3□□□□□ -1.56
LINC01049-201ENST00000426840 TMEM189A5PLL7 270 aa5.29□□□□□ -1.56
LINC01049-201ENST00000426840 BCL2P10415 239 aa5.29□□□□□ -1.56
LINC01049-201ENST00000426840 HTN1P15515 57 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms