RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 TGIF2-C20orf24A0A0A6YYL0 155 aa11.25□□□□□ -0.61
GINS3-203ENST00000426538 ZNF80P51504 273 aaPredicted RBP11.25□□□□□ -0.61
GINS3-203ENST00000426538 CT83Q5H943 113 aa11.25□□□□□ -0.61
GINS3-203ENST00000426538 SHISA2Q6UWI4 295 aa11.25□□□□□ -0.61
GINS3-203ENST00000426538 BTF3L4Q96K17 158 aa11.25□□□□□ -0.61
GINS3-203ENST00000426538 YPEL4Q96NS1 127 aa11.25□□□□□ -0.61
GINS3-203ENST00000426538 SORL1Q92673 2214 aa11.25□□□□□ -0.61
GINS3-203ENST00000426538 SMIM27A0A1W2PRY6 76 aa11.24□□□□□ -0.61
GINS3-203ENST00000426538 J3KRW8 73 aa11.24□□□□□ -0.61
GINS3-203ENST00000426538 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
GINS3-203ENST00000426538 RPL19P84098 196 aaKnown RBP11.24□□□□□ -0.61
GINS3-203ENST00000426538 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
GINS3-203ENST00000426538 TSKUQ8WUA8 353 aa11.24□□□□□ -0.61
GINS3-203ENST00000426538 TRBV24-1A0A075B6N3 115 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 XKRY2A2RUG3 117 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 OR11H12B2RN74 326 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 ORM1P02763 201 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 CXCL1P09341 107 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 FAM210BQ96KR6 192 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 FAM19A4Q96LR4 140 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 MCRIP2Q9BUT9 160 aaKnown RBP11.23□□□□□ -0.61
GINS3-203ENST00000426538 TRAV9-1A0A075B6T8 112 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 KNCNA6PVL3 124 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 HLA-DRB4P13762 266 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 CRISP2P16562 243 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 LEPP41159 167 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 TCL1AP56279 114 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 APRG1Q8IVJ8 170 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 ZFAND2AQ8N6M9 145 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 ODF3Q96PU9 254 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 NAT8BQ9UHF3 227 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 HLA-DRB4X5D2U9 266 aa11.23□□□□□ -0.61
GINS3-203ENST00000426538 FBN1P35555 2871 aaKnown RBP11.22□□□□□ -0.61
GINS3-203ENST00000426538 RAB5AP20339 215 aa11.22□□□□□ -0.61
GINS3-203ENST00000426538 TSPOP30536 169 aa11.22□□□□□ -0.61
GINS3-203ENST00000426538 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
GINS3-203ENST00000426538 GFRA4Q9GZZ7 299 aa11.22□□□□□ -0.61
GINS3-203ENST00000426538 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.61
GINS3-203ENST00000426538 FAM231BA6NCW3 169 aa11.21□□□□□ -0.61
GINS3-203ENST00000426538 HIGD1CA8MV81 97 aa11.21□□□□□ -0.61
GINS3-203ENST00000426538 H3BMM0 161 aa11.21□□□□□ -0.61
GINS3-203ENST00000426538 RPS20P60866 119 aaKnown RBP11.21□□□□□ -0.61
GINS3-203ENST00000426538 ZNF124Q15973 351 aa11.21□□□□□ -0.61
GINS3-203ENST00000426538 ODF3L2Q3SX64 289 aa11.21□□□□□ -0.61
GINS3-203ENST00000426538 WFDC9Q8NEX5 89 aa11.21□□□□□ -0.61
GINS3-203ENST00000426538 NEU1Q99519 415 aa11.21□□□□□ -0.61
GINS3-203ENST00000426538 PYGO2Q9BRQ0 406 aa11.21□□□□□ -0.61
GINS3-203ENST00000426538 TMSB15BA0A087X1C1 80 aa11.21□□□□□ -0.62
GINS3-203ENST00000426538 CDKN1BP46527 198 aa11.21□□□□□ -0.62
GINS3-203ENST00000426538 RPS10P46783 165 aaKnown RBP11.21□□□□□ -0.62
GINS3-203ENST00000426538 BEAN1Q3B7T3 259 aa11.21□□□□□ -0.62
GINS3-203ENST00000426538 KLLNB2CW77 178 aa11.2□□□□□ -0.62
GINS3-203ENST00000426538 GZMBP10144 247 aa11.2□□□□□ -0.62
GINS3-203ENST00000426538 PRR9Q5T870 116 aa11.2□□□□□ -0.62
GINS3-203ENST00000426538 STHQ8IWL8 128 aa11.2□□□□□ -0.62
GINS3-203ENST00000426538 NUP35Q8NFH5 326 aa11.2□□□□□ -0.62
GINS3-203ENST00000426538 FAM110AQ9BQ89 295 aa11.2□□□□□ -0.62
GINS3-203ENST00000426538 SPINK4O60575 86 aa11.19□□□□□ -0.62
GINS3-203ENST00000426538 CD7P09564 240 aa11.19□□□□□ -0.62
GINS3-203ENST00000426538 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
GINS3-203ENST00000426538 Q6AWC8 147 aa11.19□□□□□ -0.62
GINS3-203ENST00000426538 SPATA3Q8NHX4 192 aa11.19□□□□□ -0.62
GINS3-203ENST00000426538 M0R2Z0 102 aa11.18□□□□□ -0.62
GINS3-203ENST00000426538 KIR3DS1Q14943 382 aa11.18□□□□□ -0.62
GINS3-203ENST00000426538 SPINK13Q1W4C9 94 aa11.18□□□□□ -0.62
GINS3-203ENST00000426538 GTSF1Q8WW33 167 aa11.18□□□□□ -0.62
GINS3-203ENST00000426538 AGRNO00468 2067 aa11.18□□□□□ -0.62
GINS3-203ENST00000426538 FOXA3P55318 350 aaPredicted RBP11.18□□□□□ -0.62
GINS3-203ENST00000426538 AMTNQ6UX39 209 aa11.18□□□□□ -0.62
GINS3-203ENST00000426538 PGLYRP4Q96LB8 373 aa11.18□□□□□ -0.62
GINS3-203ENST00000426538 SRD5A3Q9H8P0 318 aa11.18□□□□□ -0.62
GINS3-203ENST00000426538 NAGKQ9UJ70 344 aa11.18□□□□□ -0.62
GINS3-203ENST00000426538 TMA7Q9Y2S6 64 aaKnown RBP11.18□□□□□ -0.62
GINS3-203ENST00000426538 TRAV12-3A0A0B4J271 114 aa11.17□□□□□ -0.62
GINS3-203ENST00000426538 C7orf71A4D174 169 aa11.17□□□□□ -0.62
GINS3-203ENST00000426538 A8MTW9 85 aa11.17□□□□□ -0.62
GINS3-203ENST00000426538 TYMSP04818 313 aa11.17□□□□□ -0.62
GINS3-203ENST00000426538 Q6ZQT7 251 aa11.17□□□□□ -0.62
GINS3-203ENST00000426538 GTSCR1Q86UQ5 136 aa11.17□□□□□ -0.62
GINS3-203ENST00000426538 TPPP3Q9BW30 176 aa11.17□□□□□ -0.62
GINS3-203ENST00000426538 TRAV12-2A0A075B6T6 113 aa11.16□□□□□ -0.62
GINS3-203ENST00000426538 IGKV3D-20A0A0C4DH25 116 aa11.16□□□□□ -0.62
GINS3-203ENST00000426538 IGLL1P15814 213 aa11.16□□□□□ -0.62
GINS3-203ENST00000426538 MRPL54Q6P161 138 aaKnown RBP11.16□□□□□ -0.62
GINS3-203ENST00000426538 BORCS7Q96B45 105 aa11.16□□□□□ -0.62
GINS3-203ENST00000426538 CLUHP3Q96NS8 147 aa11.16□□□□□ -0.62
GINS3-203ENST00000426538 C11orf21Q9P2W6 132 aa11.16□□□□□ -0.62
GINS3-203ENST00000426538 GRIFINA4D1Z8 144 aa11.15□□□□□ -0.62
GINS3-203ENST00000426538 FXYD7P58549 80 aa11.15□□□□□ -0.62
GINS3-203ENST00000426538 NUTF2P61970 127 aaKnown RBP11.15□□□□□ -0.62
GINS3-203ENST00000426538 GFI1BQ5VTD9 330 aa11.15□□□□□ -0.62
GINS3-203ENST00000426538 FAM159AQ6UWV7 190 aa11.15□□□□□ -0.62
GINS3-203ENST00000426538 VWFP04275 2813 aa11.15□□□□□ -0.62
GINS3-203ENST00000426538 C1orf196B1AJZ1 125 aa11.15□□□□□ -0.63
GINS3-203ENST00000426538 COX19Q49B96 90 aa11.15□□□□□ -0.63
GINS3-203ENST00000426538 MUC21Q5SSG8 566 aa11.15□□□□□ -0.63
GINS3-203ENST00000426538 ATP5L2Q7Z4Y8 100 aa11.15□□□□□ -0.63
GINS3-203ENST00000426538 FER1L6-AS1Q8NA97 138 aa11.15□□□□□ -0.63
GINS3-203ENST00000426538 ZNF324O75467 553 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms